Variant report
| Variant | esv1009101 |
|---|---|
| Chromosome Location | chr9:141121841-141122277 |
| allele | n/a |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | rs62429375 | chr9:141121841-141121842 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 2 | rs62581266 | chr9:141121889-141121890 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 3 | rs373163166 | chr9:141121897-141121898 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 4 | rs376647291 | chr9:141121960-141121961 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 5 | rs537684015 | chr9:141122012-141122013 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 6 | rs557348359 | chr9:141122013-141122014 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 7 | rs567995407 | chr9:141122017-141122018 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 8 | rs369908836 | chr9:141122020-141122021 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 9 | rs28671602 | chr9:141122023-141122024 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 10 | rs375670669 | chr9:141122025-141122026 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 11 | rs370294129 | chr9:141122030-141122031 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 12 | rs28413101 | chr9:141122072-141122073 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 13 | rs373227967 | chr9:141122075-141122076 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 14 | rs12380504 | chr9:141122153-141122154 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 15 | rs12379626 | chr9:141122162-141122163 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 16 | rs28561392 | chr9:141122182-141122183 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 17 | rs376543486 | chr9:141122271-141122272 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Variant related diseases (count:19)
| Disease | PMID | Source |
|---|---|---|
| Leukemia | 17361228 | CNVD |
| Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
| Glioblastoma | 16823260 | CNVD |
| Oral squamous cell carcinoma | 17134496 | CNVD |
| Cardiac fibroma | 18329553 | CNVD |
| Lung cancer | 19147751 | CNVD |
| Cervical cancer | 17311676 | CNVD |
| Endometrioid adenocarcinoma | 16974079 | CNVD |
| Gastric cancer | 17908304 | CNVD |
| Adenoid cystic carcinoma | 18698036 | CNVD |
| Salivary gland adenoid cystic carcinoma | 17545515 | CNVD |
| Chordoma | 18071362 | CNVD |
| Primary mediastinal b-cell lymphoma | 17728785 | CNVD |
| Sudden cardiac death | 19188705 | CNVD |
| Myoepithelioma | 18604193 | CNVD |
| Tuberous sclerosis | 19566914 | CNVD |
| Multiple myeloma | 16616336 | CNVD |
| Acute lymphoblastic leukemia | 19100363 | CNVD |
| Mantle cell lymphoma | 19029149 | CNVD |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr9:141119400-141123400 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 2 | chr9:141122200-141124800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
