The 2.0 version of rSNPBase

Variant report

Variant esv1047824
Chromosome Location chr1:10277048-10277049
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10272200-10277600 Weak transcription Esophagus oesophagus
2 chr1:10272200-10278000 Weak transcription Colonic Mucosa Colon
3 chr1:10272200-10278200 Weak transcription Placenta Placenta
4 chr1:10272600-10277600 Weak transcription Monocytes-CD14+_RO01746 blood
5 chr1:10272600-10277800 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr1:10272600-10277800 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr1:10272600-10284000 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr1:10272600-10284000 Weak transcription Fetal Intestine Small intestine
9 chr1:10272600-10368200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr1:10272800-10277600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:10272800-10284000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:10272800-10284400 Weak transcription Gastric stomach
13 chr1:10272800-10290000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:10272800-10296600 Weak transcription Placenta Amnion Placenta Amnion
15 chr1:10273600-10277800 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr1:10273600-10278200 Weak transcription Fetal Intestine Large intestine
17 chr1:10274000-10277800 Weak transcription Fetal Kidney kidney
18 chr1:10274000-10282400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr1:10274000-10285200 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr1:10274200-10277600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr1:10274200-10277800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr1:10274200-10277800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:10274200-10278200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr1:10274200-10284600 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr1:10274400-10278000 Weak transcription Fetal Stomach stomach
26 chr1:10274600-10281200 Weak transcription Fetal Muscle Trunk muscle
27 chr1:10275400-10277400 Enhancers Cortex derived primary cultured neurospheres brain
28 chr1:10275400-10278600 Enhancers Psoas Muscle Psoas
29 chr1:10275600-10277200 Enhancers Aorta Aorta
30 chr1:10275600-10278400 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:10275600-10278400 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr1:10275600-10278600 Enhancers Fetal Heart heart
33 chr1:10275600-10278800 Enhancers Left Ventricle heart
34 chr1:10275600-10279000 Enhancers Liver Liver
35 chr1:10275800-10278000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
36 chr1:10275800-10278000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
37 chr1:10275800-10278000 Enhancers Colon Smooth Muscle Colon
38 chr1:10275800-10278400 Enhancers HUVEC blood vessel
39 chr1:10275800-10278800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:10275800-10278800 Enhancers Rectal Smooth Muscle rectum
41 chr1:10276000-10277200 Weak transcription Ovary ovary
42 chr1:10276000-10278600 Enhancers Fetal Adrenal Gland Adrenal Gland
43 chr1:10276000-10278600 Enhancers Fetal Brain Male brain
44 chr1:10276200-10277200 Enhancers Small Intestine intestine
45 chr1:10276200-10278400 Enhancers Right Ventricle heart
46 chr1:10276200-10278400 Enhancers NH-A brain
47 chr1:10276200-10278800 Enhancers Right Atrium heart
48 chr1:10276200-10278800 Enhancers NHDF-Ad bronchial
49 chr1:10276200-10279000 Enhancers Osteobl bone
50 chr1:10276400-10277200 Enhancers HSMMtube muscle

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Last update: Aug 31, 2015