No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs554784854 |
chr19:42786922-42786923 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs576215845 |
chr19:42787036-42787037 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs543540504 |
chr19:42787047-42787048 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs35512593 |
chr19:42787130-42787131 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs111660203 |
chr19:42787134-42787135 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs553271424 |
chr19:42787147-42787148 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs578007386 |
chr19:42787158-42787159 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs575817158 |
chr19:42787175-42787176 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs35590680 |
chr19:42787198-42787199 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs545144025 |
chr19:42787238-42787239 |
Flanking Active TSS Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs193270537 |
chr19:42787262-42787263 |
Flanking Active TSS Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs563338447 |
chr19:42787330-42787331 |
Flanking Active TSS Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs559482548 |
chr19:42787377-42787378 |
Flanking Active TSS Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs530042226 |
chr19:42787392-42787393 |
Flanking Active TSS Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs548486330 |
chr19:42787435-42787436 |
Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Active TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs73552881 |
chr19:42787490-42787491 |
Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Active TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
17 |
rs542343486 |
chr19:42787522-42787523 |
Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Active TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs552366280 |
chr19:42787552-42787553 |
Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Active TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs138358776 |
chr19:42787603-42787604 |
Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs202176890 |
chr19:42787646-42787647 |
Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs3810148 |
chr19:42787664-42787665 |
Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
22 |
rs546622597 |
chr19:42787670-42787671 |
Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs183643724 |
chr19:42787676-42787677 |
Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs536988941 |
chr19:42787687-42787688 |
Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs546203098 |
chr19:42787700-42787701 |
Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs554823591 |
chr19:42787792-42787793 |
Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs576302784 |
chr19:42787866-42787867 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs12978818 |
chr19:42787890-42787891 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs12980581 |
chr19:42787891-42787892 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs537265525 |
chr19:42787953-42787954 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs566728587 |
chr19:42788002-42788003 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs577311604 |
chr19:42788019-42788020 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs541154669 |
chr19:42788022-42788023 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs113888433 |
chr19:42788175-42788176 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs187522860 |
chr19:42788222-42788223 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs192042891 |
chr19:42788228-42788229 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs184104469 |
chr19:42788231-42788232 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs188458677 |
chr19:42788420-42788421 |
Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs561141658 |
chr19:42788481-42788482 |
Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs574718288 |
chr19:42788498-42788499 |
Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs542215918 |
chr19:42788719-42788720 |
Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs549556810 |
chr19:42788769-42788770 |
Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs369985055 |
chr19:42788835-42788836 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs563589724 |
chr19:42788844-42788845 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs530785646 |
chr19:42788851-42788852 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs371261157 |
chr19:42788910-42788911 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs374815992 |
chr19:42788941-42788942 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs565197061 |
chr19:42788946-42788947 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs535810495 |
chr19:42788967-42788968 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs192606966 |
chr19:42788970-42788971 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|