The 2.0 version of rSNPBase

Variant report

Variant esv1217989
Chromosome Location chr5:61795419-61795420
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:61709800-61809200 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr5:61728400-61807600 Weak transcription Psoas Muscle Psoas
3 chr5:61728800-61838200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr5:61730000-61834200 Weak transcription Gastric stomach
5 chr5:61732800-61805200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr5:61739200-61862800 Weak transcription Brain Substantia Nigra brain
7 chr5:61744800-61838600 Weak transcription Colonic Mucosa Colon
8 chr5:61748000-61862800 Weak transcription Right Ventricle heart
9 chr5:61758800-61890000 Weak transcription Small Intestine intestine
10 chr5:61759000-61834200 Weak transcription Esophagus oesophagus
11 chr5:61760800-61847200 Weak transcription Rectal Smooth Muscle rectum
12 chr5:61763400-61799400 Weak transcription Fetal Heart heart
13 chr5:61763800-61809600 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr5:61764000-61833800 Weak transcription Fetal Brain Female brain
15 chr5:61764000-61858200 Weak transcription Placenta Placenta
16 chr5:61764200-61796400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr5:61764200-61798800 Weak transcription Spleen Spleen
18 chr5:61764200-61818000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr5:61764200-61821200 Weak transcription Aorta Aorta
20 chr5:61764200-61826600 Weak transcription Brain Hippocampus Middle brain
21 chr5:61764200-61827000 Weak transcription Thymus Thymus
22 chr5:61764200-61830000 Weak transcription Brain Angular Gyrus brain
23 chr5:61764200-61895800 Weak transcription Pancreas Pancrea
24 chr5:61764400-61796600 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr5:61764400-61801200 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr5:61766200-61849800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr5:61771200-61864800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr5:61771400-61797600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr5:61771400-61804000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr5:61771400-61863000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr5:61771800-61811400 Weak transcription HMEC breast
32 chr5:61772000-61801200 Weak transcription NH-A brain
33 chr5:61772200-61850800 Weak transcription HSMMtube muscle
34 chr5:61772600-61842000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr5:61773600-61813400 Weak transcription NHDF-Ad bronchial
36 chr5:61773800-61803000 Weak transcription NHLF lung
37 chr5:61774200-61827000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr5:61775000-61811600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr5:61775200-61829200 Weak transcription Brain Germinal Matrix brain
40 chr5:61778600-61798600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr5:61780800-61796200 Weak transcription Placenta Amnion Placenta Amnion
42 chr5:61781600-61867600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr5:61783600-61798600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr5:61785600-61811400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr5:61787000-61811400 Weak transcription HUVEC blood vessel
46 chr5:61787200-61836000 Weak transcription Colon Smooth Muscle Colon
47 chr5:61787400-61795800 Weak transcription Brain Inferior Temporal Lobe brain
48 chr5:61787400-61797800 Weak transcription H9 Cell Line embryonic stem cell
49 chr5:61787400-61799800 Weak transcription K562 blood
50 chr5:61787400-61818600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015