The 2.0 version of rSNPBase

Variant report

Variant esv1589834
Chromosome Location chr5:61829041-61829042
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:61728800-61838200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr5:61730000-61834200 Weak transcription Gastric stomach
3 chr5:61739200-61862800 Weak transcription Brain Substantia Nigra brain
4 chr5:61744800-61838600 Weak transcription Colonic Mucosa Colon
5 chr5:61748000-61862800 Weak transcription Right Ventricle heart
6 chr5:61758800-61890000 Weak transcription Small Intestine intestine
7 chr5:61759000-61834200 Weak transcription Esophagus oesophagus
8 chr5:61760800-61847200 Weak transcription Rectal Smooth Muscle rectum
9 chr5:61764000-61833800 Weak transcription Fetal Brain Female brain
10 chr5:61764000-61858200 Weak transcription Placenta Placenta
11 chr5:61764200-61830000 Weak transcription Brain Angular Gyrus brain
12 chr5:61764200-61895800 Weak transcription Pancreas Pancrea
13 chr5:61766200-61849800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr5:61771200-61864800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr5:61771400-61863000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr5:61772200-61850800 Weak transcription HSMMtube muscle
17 chr5:61772600-61842000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr5:61775200-61829200 Weak transcription Brain Germinal Matrix brain
19 chr5:61781600-61867600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr5:61787200-61836000 Weak transcription Colon Smooth Muscle Colon
21 chr5:61787400-61866800 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr5:61789400-61835400 Weak transcription Fetal Brain Male brain
23 chr5:61793600-61905000 Weak transcription NHEK skin
24 chr5:61795000-61834000 Weak transcription Ovary ovary
25 chr5:61795200-61850600 Weak transcription Fetal Intestine Small intestine
26 chr5:61796600-61866600 Weak transcription Osteobl bone
27 chr5:61796800-61899000 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr5:61797000-61833800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr5:61797000-61861200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr5:61802600-61889000 Weak transcription NH-A brain
31 chr5:61803000-61904400 Weak transcription Fetal Kidney kidney
32 chr5:61803200-61836200 Weak transcription Fetal Intestine Large intestine
33 chr5:61803200-61875000 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr5:61803400-61855000 Weak transcription HSMM muscle
35 chr5:61803400-61863600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr5:61804400-61865200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr5:61806800-61863400 Weak transcription Lung lung
38 chr5:61812000-61834400 Weak transcription Fetal Muscle Trunk muscle
39 chr5:61812000-61834600 Weak transcription HMEC breast
40 chr5:61812200-61865200 Weak transcription HUVEC blood vessel
41 chr5:61814400-61834200 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr5:61815000-61861400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr5:61815200-61890600 Weak transcription Primary T killer memory cells from peripheral blood blood
44 chr5:61816000-61857800 Weak transcription Fetal Stomach stomach
45 chr5:61816200-61862200 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr5:61817600-61833000 Weak transcription GM12878-XiMat blood
47 chr5:61819200-61834600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr5:61819200-61860400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr5:61819400-61838000 Weak transcription H9 Cell Line embryonic stem cell
50 chr5:61819800-61838000 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015