The 2.0 version of rSNPBase

Variant report

Variant esv1765547
Chromosome Location chr19:52212486-52212487
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52208000-52216600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr19:52208400-52213000 Weak transcription Esophagus oesophagus
3 chr19:52208400-52213000 Weak transcription Lung lung
4 chr19:52208400-52216200 Weak transcription Fetal Brain Male brain
5 chr19:52208400-52218200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr19:52208400-52220200 Weak transcription Ovary ovary
7 chr19:52208600-52212800 Weak transcription Primary T cells from cord blood blood
8 chr19:52208600-52212800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr19:52208600-52213000 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr19:52208600-52214400 Weak transcription Primary B cells from cord blood blood
11 chr19:52208600-52214400 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr19:52208600-52218800 Weak transcription Fetal Heart heart
13 chr19:52208800-52213000 Weak transcription Thymus Thymus
14 chr19:52208800-52213000 Weak transcription NHEK skin
15 chr19:52208800-52213200 Weak transcription Primary B cells from peripheral blood blood
16 chr19:52208800-52213600 Weak transcription Colon Smooth Muscle Colon
17 chr19:52208800-52214600 Weak transcription GM12878-XiMat blood
18 chr19:52208800-52222000 Weak transcription Brain Inferior Temporal Lobe brain
19 chr19:52209000-52214800 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr19:52209600-52213800 Weak transcription Brain Cingulate Gyrus brain
21 chr19:52209600-52222400 Weak transcription Spleen Spleen
22 chr19:52209800-52212600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr19:52209800-52212800 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr19:52209800-52213000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr19:52210000-52213000 Weak transcription Fetal Brain Female brain
26 chr19:52210000-52214800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr19:52210200-52213200 Weak transcription Fetal Intestine Large intestine
28 chr19:52210200-52213400 Weak transcription Primary monocytes fromperipheralblood blood
29 chr19:52210200-52213400 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr19:52210400-52212800 Weak transcription Pancreas Pancrea
31 chr19:52210400-52213000 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr19:52210400-52213600 Weak transcription Stomach Smooth Muscle stomach
33 chr19:52210400-52216400 Weak transcription Brain Anterior Caudate brain
34 chr19:52210400-52216800 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr19:52210400-52218200 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr19:52210400-52222000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr19:52210600-52213400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr19:52210800-52213800 Weak transcription Brain Substantia Nigra brain
39 chr19:52210800-52215800 Weak transcription Fetal Kidney kidney
40 chr19:52210800-52216400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr19:52211000-52213000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr19:52211000-52214400 Weak transcription Placenta Amnion Placenta Amnion
43 chr19:52211000-52215000 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr19:52211000-52216200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr19:52211000-52216200 Weak transcription HMEC breast
46 chr19:52211000-52218000 Weak transcription Brain Hippocampus Middle brain
47 chr19:52211200-52213000 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr19:52211200-52213200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr19:52211200-52213400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr19:52211200-52213600 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015