Variant report

Variant	esv1795476
Chromosome Location	chr1:224186148-224226044
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:802)
CpG islands
(count:183)
Chromatin interactive
region (count:1)
LncRNA
region (count:26)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:802 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:224200105-224202376	HepG2	liver:	n/a	n/a
2	ARID3A	chr1:224225266-224225295	K562	blood:	n/a	n/a
3	ARID3A	chr1:224203577-224204130	HepG2	liver:	n/a	n/a
4	ATF1	chr1:224201408-224202650	K562	blood:	n/a	n/a
5	ATF1	chr1:224203501-224203872	K562	blood:	n/a	n/a
6	ATF1	chr1:224200184-224201129	K562	blood:	n/a	n/a
7	BATF	chr1:224191763-224192172	GM12878	blood:	n/a	n/a
8	BATF	chr1:224203062-224203923	GM12878	blood:	n/a	n/a
9	BATF	chr1:224216986-224217637	GM12878	blood:	n/a	n/a
10	BATF	chr1:224202153-224202695	GM12878	blood:	n/a	n/a
11	BATF	chr1:224220653-224220945	GM12878	blood:	n/a	chr1:224220777-224220788
12	BATF	chr1:224199351-224200029	GM12878	blood:	n/a	n/a
13	BATF	chr1:224202697-224203908	GM12878	blood:	n/a	n/a
14	BATF	chr1:224203989-224204333	GM12878	blood:	n/a	n/a
15	BATF	chr1:224199329-224201189	GM12878	blood:	n/a	n/a
16	BATF	chr1:224200052-224202050	GM12878	blood:	n/a	n/a
17	BATF	chr1:224220613-224220910	GM12878	blood:	n/a	chr1:224220777-224220788
18	BATF	chr1:224201232-224201937	GM12878	blood:	n/a	n/a
19	BATF	chr1:224191763-224192234	GM12878	blood:	n/a	n/a
20	BATF	chr1:224203983-224204286	GM12878	blood:	n/a	n/a
21	BATF	chr1:224216980-224217656	GM12878	blood:	n/a	n/a
22	BATF	chr1:224202255-224203035	GM12878	blood:	n/a	n/a
23	BATF	chr1:224223656-224223852	GM12878	blood:	n/a	chr1:224223690-224223700
24	BCL11A	chr1:224202285-224202689	GM12878	blood:	n/a	n/a
25	BCL11A	chr1:224203213-224203942	GM12878	blood:	n/a	n/a
26	BCL11A	chr1:224199310-224200048	GM12878	blood:	n/a	n/a
27	BCL11A	chr1:224200072-224200955	GM12878	blood:	n/a	n/a
28	BCL11A	chr1:224199651-224199980	GM12878	blood:	n/a	n/a
29	BCL11A	chr1:224203976-224204332	GM12878	blood:	n/a	n/a
30	BCL11A	chr1:224199343-224199575	GM12878	blood:	n/a	n/a
31	BCL11A	chr1:224191830-224192355	GM12878	blood:	n/a	chr1:224192201-224192210
32	BCL11A	chr1:224203279-224203874	GM12878	blood:	n/a	n/a
33	BCL11A	chr1:224217248-224217715	GM12878	blood:	n/a	chr1:224217512-224217521
34	BCL11A	chr1:224217376-224217584	GM12878	blood:	n/a	chr1:224217512-224217521
35	BCL11A	chr1:224201297-224201971	GM12878	blood:	n/a	n/a
36	BCL11A	chr1:224200054-224203056	GM12878	blood:	n/a	n/a
37	BHLHE40	chr1:224203525-224203893	HepG2	liver:	n/a	n/a
38	BHLHE40	chr1:224199631-224200004	HepG2	liver:	n/a	n/a
39	BRCA1	chr1:224200261-224202783	HepG2	liver:	n/a	n/a
40	BRCA1	chr1:224199651-224202797	GM12878	blood:	n/a	n/a
41	CBX3	chr1:224199304-224200004	K562	blood:	n/a	n/a
42	CBX3	chr1:224201773-224202284	HCT-116	colon:	n/a	n/a
43	CBX3	chr1:224200060-224202725	K562	blood:	n/a	n/a
44	CBX3	chr1:224192280-224192953	K562	blood:	n/a	n/a
45	CBX3	chr1:224224984-224225484	K562	blood:	n/a	n/a
46	CEBPB	chr1:224225413-224225664	K562	blood:	n/a	n/a
47	CEBPB	chr1:224225457-224225635	HepG2	liver:	n/a	n/a
48	CEBPB	chr1:224217332-224217575	K562	blood:	n/a	n/a
49	CEBPB	chr1:224225002-224225648	K562	blood:	n/a	n/a
50	CEBPB	chr1:224192369-224192505	Hela-S3	cervix:	n/a	n/a

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:224224049-224224099	HUVEC	blood vessel:	n/a
2	chr1:224224049-224224099	HL-60	blood:	n/a
3	chr1:224222745-224222795	HRPEpiC	eye:	n/a
4	chr1:224224049-224224099	ovcar-3	ovarian:	n/a
5	chr1:224222745-224222795	NT2-D1	testis:	n/a
6	chr1:224224049-224224099	PrEC	prostate:	n/a
7	chr1:224222745-224222795	MCF10A-Er-Src	breast:	n/a
8	chr1:224195005-224195055	RPTEC	kidney:	n/a
9	chr1:224224049-224224099	HCF	heart:	n/a
10	chr1:224195005-224195055	HEK293	kidney:	embryo
11	chr1:224222745-224222795	AG04450	lung:	fetal
12	chr1:224224049-224224099	HCPEpiC	choroid plexus:	n/a
13	chr1:224222745-224222795	GM12891	blood:	n/a
14	chr1:224224049-224224099	RPTEC	kidney:	n/a
15	chr1:224222745-224222795	GM19239	blood:	n/a
16	chr1:224195005-224195055	CMK	blood:	n/a
17	chr1:224195005-224195055	Hepatocyte	liver:	n/a
18	chr1:224222745-224222795	LNCaP	prostate:	n/a
19	chr1:224224049-224224099	HRE	kidney:	n/a
20	chr1:224195005-224195055	HepG2	liver:	n/a
21	chr1:224222745-224222795	HUVEC	blood vessel:	n/a
22	chr1:224224049-224224099	Caco-2	colon:	n/a
23	chr1:224195005-224195055	NHDF-neo	bronchial:	n/a
24	chr1:224222745-224222795	HCM	heart:	n/a
25	chr1:224195005-224195055	Caco-2	colon:	n/a
26	chr1:224222745-224222795	HRCEpiC	kidney:	n/a
27	chr1:224222745-224222795	HepG2	liver:	n/a
28	chr1:224195005-224195055	AG10803	skin:	n/a
29	chr1:224195005-224195055	AoSMC	blood vessel:	n/a
30	chr1:224195005-224195055	HCT-116	colon:	n/a
31	chr1:224195005-224195055	IMR90	lung:	fetal
32	chr1:224222745-224222795	BJ	skin:	n/a
33	chr1:224224049-224224099	GM06990	blood:	n/a
34	chr1:224224049-224224099	HRPEpiC	eye:	n/a
35	chr1:224222745-224222795	SAEC	small airway:	n/a
36	chr1:224222745-224222795	SK-N-MC	brain:	n/a
37	chr1:224224049-224224099	NH-A	brain:	n/a
38	chr1:224224049-224224099	MCF10A-Er-Src	breast:	n/a
39	chr1:224224049-224224099	SK-N-SH_RA	brain:	n/a
40	chr1:224224049-224224099	HepG2	liver:	n/a
41	chr1:224195005-224195055	NHBE	bronchial:	n/a
42	chr1:224222745-224222795	HIPEpiC	eye:	n/a
43	chr1:224222745-224222795	Caco-2	colon:	n/a
44	chr1:224222745-224222795	A549	lung:	n/a
45	chr1:224195005-224195055	HPAEpiC	pulmonary alveolar:	n/a
46	chr1:224222745-224222795	HEK293	kidney:	embryo
47	chr1:224224049-224224099	AG04449	skin:	fetal
48	chr1:224222745-224222795	AG09319	gingival:	n/a
49	chr1:224224049-224224099	MCF-7	breast:	n/a
50	chr1:224224049-224224099	AG09319	gingival:	n/a

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:223885675..223886337-chr1:224192381..224192903,2	K562	blood:

(count:26 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FBXO28-4	chr1:224216529-224216829	NONHSAT009766
2	lnc-TP53BP2-7	chr1:224218406-224218498	NONHSAT009769
3	lnc-FBXO28-1	chr1:224190224-224190324	NONHSAT009761
4	lnc-FBXO28-1	chr1:224191222-224191356	ENSG00000185495.6
5	lnc-FBXO28-4	chr1:224216293-224216829	NONHSAT009768
6	lnc-FBXO28-1	chr1:224197022-224197405	ENSG00000185495.6
7	lnc-FBXO28-4	chr1:224216253-224216275	NONHSAT009766
8	lnc-TP53BP2-7	chr1:224221175-224221224	NONHSAT009769
9	lnc-FBXO28-4	chr1:224216529-224216829	NONHSAT009767
10	lnc-FBXO28-1	chr1:224190017-224190324	NONHSAT009760
11	lnc-FBXO28-4	chr1:224219818-224220034	NONHSAT009766
12	lnc-FBXO28-4	chr1:224222257-224222380	NONHSAT009767
13	lnc-FBXO28-4	chr1:224217383-224217533	NONHSAT009768
14	lnc-FBXO28-1	chr1:224196429-224198309	ENSG00000185495.6
15	lnc-FBXO28-1	chr1:224197022-224197818	NONHSAT009763
16	lnc-FBXO28-1	chr1:224191295-224191356	NONHSAT009760
17	lnc-FBXO28-1	chr1:224196429-224198314	ENSG00000263182.1
18	lnc-FBXO28-4	chr1:224216253-224216275	NONHSAT009767
19	lnc-FBXO28-1	chr1:224191222-224191356	NONHSAT009761
20	lnc-FBXO28-1	chr1:224197022-224197069	NONHSAT009760
21	lnc-FBXO28-1	chr1:224189609-224191356	NONHSAT009763
22	lnc-FBXO28-1	chr1:224194996-224195119	NONHSAT009763
23	lnc-TP53BP2-7	chr1:224222656-224222758	NONHSAT009769
24	lnc-FBXO28-1	chr1:224191211-224191356	NONHSAT009764
25	lnc-FBXO28-1	chr1:224190224-224190324	ENSG00000185495.6
26	lnc-FBXO28-1	chr1:224197022-224197245	NONHSAT009764

No data

Variant related genes	Relation type
ENSG00000263182	TF binding region
ENSG00000269358	TF binding region
ENSG00000185495	TF binding region
ENSG00000229930	TF binding region
ENSG00000263182	CpG island
ENSG00000269358	CpG island
ENSG00000185495	CpG island
ENSG00000229930	CpG island

Extended variants
information (count: 1630 )
Associated
traits (count: 96 )

Variant overlapped rSNPs/rCNVs (count:1630 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs185010002	chr1:224186160-224186161	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs565417736	chr1:224186257-224186258	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs535916865	chr1:224186258-224186259	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs12562321	chr1:224186260-224186261	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
5	rs569596675	chr1:224186296-224186297	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs564124707	chr1:224186326-224186327	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs145499847	chr1:224186340-224186341	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs559197070	chr1:224186447-224186448	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs577505545	chr1:224186516-224186517	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs535214972	chr1:224186601-224186602	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs190206746	chr1:224186656-224186657	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs575106669	chr1:224186676-224186677	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs533195626	chr1:224186746-224186747	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs182509656	chr1:224186772-224186773	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs186867518	chr1:224186773-224186774	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs575591492	chr1:224186814-224186815	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs545919244	chr1:224186847-224186848	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs565171994	chr1:224186902-224186903	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs546563233	chr1:224186908-224186909	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs59052313	chr1:224186912-224186913	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs559090690	chr1:224186937-224186938	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs529850813	chr1:224187008-224187009	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs547832677	chr1:224187069-224187070	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs191601527	chr1:224187087-224187088	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs372290316	chr1:224187102-224187103	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs551917953	chr1:224187112-224187113	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs566787638	chr1:224187133-224187134	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs4233236	chr1:224187180-224187181	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs183566482	chr1:224187201-224187202	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs200897989	chr1:224187230-224187231	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs369369181	chr1:224187247-224187248	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs553717742	chr1:224187248-224187249	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs557360945	chr1:224187249-224187250	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs201174614	chr1:224187301-224187302	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs75314931	chr1:224187318-224187319	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs374463530	chr1:224187403-224187404	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs529173056	chr1:224187463-224187464	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs575945297	chr1:224187466-224187467	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs137859661	chr1:224187474-224187475	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs59660058	chr1:224187490-224187491	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs371448980	chr1:224187496-224187497	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs536103030	chr1:224187508-224187509	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs368591335	chr1:224187520-224187521	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs548529662	chr1:224187571-224187572	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs188851321	chr1:224187615-224187616	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs72751623	chr1:224187621-224187622	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs372011323	chr1:224187668-224187669	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs537544195	chr1:224187670-224187671	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs557469858	chr1:224187723-224187724	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs9701865	chr1:224187759-224187760	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:96)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Liposarcoma	21253554	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
T-cell lymphomas	19863542	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Basal cell lymphoma	17170743	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Mental retardation	19951919	CNVD
Non-syndromic sensorineural hearing loss	17873649	CNVD
Basal cell lymphoma	17053054	CNVD
Developmental delay	21147756	CNVD
Autism	14699429	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	20808228	CNVD
Fumarase deficiency	21572526	CNVD
Autism	17483303	CNVD
Kartagener syndrome	16639409	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Leukoplakia	24403051	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Glioblastoma multiforme	21138945	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Cancer	20164920	CNVD
Cancer	17060936	CNVD
Breast cancer	22522925	CNVD
Schizophrenia	23813976	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:332 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:224181200-224199200	Weak transcription	Brain Substantia Nigra	brain
2	chr1:224181400-224186800	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr1:224181400-224199200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr1:224181600-224187000	Weak transcription	Fetal Lung	lung
5	chr1:224181600-224192000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr1:224181600-224192000	Weak transcription	K562	blood
7	chr1:224181600-224192400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr1:224181600-224192400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr1:224181600-224192400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
10	chr1:224181600-224193600	Weak transcription	Fetal Brain Female	brain
11	chr1:224181600-224195000	Weak transcription	HSMM	muscle
12	chr1:224181600-224195400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
13	chr1:224181600-224195800	Weak transcription	HSMMtube	muscle
14	chr1:224181600-224196400	Weak transcription	Fetal Intestine Large	intestine
15	chr1:224181600-224196400	Weak transcription	Fetal Muscle Leg	muscle
16	chr1:224181600-224196400	Weak transcription	A549	lung
17	chr1:224181600-224199000	Weak transcription	Fetal Stomach	stomach
18	chr1:224181600-224199200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
19	chr1:224181600-224199200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
20	chr1:224181600-224199200	Weak transcription	Primary T helper cells PMA-I stimulated	--
21	chr1:224181600-224199200	Weak transcription	Brain Cingulate Gyrus	brain
22	chr1:224181600-224199200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
23	chr1:224181600-224199200	Weak transcription	Colon Smooth Muscle	Colon
24	chr1:224181600-224199400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
25	chr1:224181600-224199400	Weak transcription	NH-A	brain
26	chr1:224181800-224186400	Weak transcription	Primary B cells from peripheral blood	blood
27	chr1:224181800-224186800	Weak transcription	Primary B cells from cord blood	blood
28	chr1:224181800-224191600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr1:224181800-224192000	Weak transcription	HUES48 Cell Line	embryonic stem cell
30	chr1:224181800-224192000	Weak transcription	Skeletal Muscle Female	skeletal muscle
31	chr1:224181800-224192600	Weak transcription	HUES64 Cell Line	embryonic stem cell
32	chr1:224181800-224192600	Weak transcription	Liver	Liver
33	chr1:224181800-224195200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
34	chr1:224181800-224195600	Weak transcription	Fetal Intestine Small	intestine
35	chr1:224181800-224196600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
36	chr1:224181800-224197800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
37	chr1:224181800-224199200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr1:224181800-224199200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr1:224181800-224199200	Weak transcription	Primary hematopoietic stem cells	blood
40	chr1:224181800-224199200	Weak transcription	Adipose Nuclei	Adipose
41	chr1:224181800-224199200	Weak transcription	Brain Anterior Caudate	brain
42	chr1:224181800-224199200	Weak transcription	Brain Inferior Temporal Lobe	brain
43	chr1:224181800-224199200	Weak transcription	Duodenum Mucosa	Duodenum
44	chr1:224181800-224199200	Weak transcription	Duodenum Smooth Muscle	Duodenum
45	chr1:224181800-224199200	Weak transcription	Fetal Kidney	kidney
46	chr1:224181800-224199200	Weak transcription	Ovary	ovary
47	chr1:224181800-224199200	Weak transcription	Rectal Mucosa Donor 29	rectum
48	chr1:224181800-224199200	Weak transcription	Skeletal Muscle Male	skeletal muscle
49	chr1:224181800-224201800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
50	chr1:224182200-224186200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links