Variant report

Variant esv1798404
Chromosome Location chr1:152472839-152587113
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:259 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:152470000-152473800 Enhancers A549 lung
2 chr1:152471000-152474600 Weak transcription Esophagus oesophagus
3 chr1:152471400-152478800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
4 chr1:152473200-152474800 Enhancers Fetal Intestine Large intestine
5 chr1:152473200-152480600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:152473600-152476200 Enhancers Placenta Placenta
7 chr1:152473600-152480200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:152473800-152475000 Enhancers NHEK skin
9 chr1:152473800-152475800 Flanking Active TSS A549 lung
10 chr1:152473800-152478400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:152473800-152480600 Enhancers HMEC breast
12 chr1:152474000-152475400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr1:152474200-152474600 Enhancers HepG2 liver
14 chr1:152474200-152475000 Enhancers Osteobl bone
15 chr1:152474600-152475200 Enhancers Esophagus oesophagus
16 chr1:152474600-152475200 Enhancers NHDF-Ad bronchial
17 chr1:152474800-152475800 Weak transcription Fetal Intestine Large intestine
18 chr1:152475000-152475400 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr1:152475000-152475400 Flanking Active TSS NHEK skin
20 chr1:152475200-152477200 Weak transcription Esophagus oesophagus
21 chr1:152475400-152480600 Enhancers NHEK skin
22 chr1:152475800-152476400 Enhancers A549 lung
23 chr1:152475800-152479600 Enhancers Fetal Intestine Large intestine
24 chr1:152476200-152477600 Weak transcription Placenta Placenta
25 chr1:152476400-152482400 Weak transcription A549 lung
26 chr1:152477000-152477200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr1:152477200-152478000 Enhancers Esophagus oesophagus
28 chr1:152477200-152478400 Enhancers Fetal Intestine Small intestine
29 chr1:152477600-152477800 Enhancers Placenta Placenta
30 chr1:152478000-152479400 Weak transcription Esophagus oesophagus
31 chr1:152478400-152478800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:152478400-152479000 Weak transcription Fetal Intestine Small intestine
33 chr1:152478800-152480400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:152479000-152479200 Enhancers Fetal Intestine Small intestine
35 chr1:152479200-152479400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
36 chr1:152479400-152479600 Enhancers Esophagus oesophagus
37 chr1:152479800-152480000 Enhancers Liver Liver
38 chr1:152480600-152486600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:152482000-152484600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
40 chr1:152483600-152485800 Weak transcription A549 lung
41 chr1:152485000-152485200 Bivalent Enhancer Duodenum Mucosa Duodenum
42 chr1:152485800-152486200 Enhancers A549 lung
43 chr1:152486200-152486400 Bivalent/Poised TSS Esophagus oesophagus
44 chr1:152486200-152487000 Weak transcription A549 lung
45 chr1:152486400-152486600 Weak transcription NHEK skin
46 chr1:152486400-152487000 Active TSS Esophagus oesophagus
47 chr1:152486400-152487200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:152486400-152487600 Enhancers HMEC breast
49 chr1:152486600-152486800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr1:152486600-152487600 Enhancers NHEK skin

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