Variant report

Variant	esv1802671
Chromosome Location	chr14:96942352-97035680
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1367)
CpG islands
(count:1222)
Chromatin interactive
region (count:111)
LncRNA
region (count:10)
Mature miRNA
region (count: 0)
miRNA target
sites (count:5)

(count:1367 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr14:96978913-96979336	HepG2	liver:	n/a	n/a
2	ARID3A	chr14:97030779-97030978	HepG2	liver:	n/a	n/a
3	ARID3A	chr14:96975227-96975533	HepG2	liver:	n/a	n/a
4	ARID3A	chr14:96967807-96968858	HepG2	liver:	n/a	n/a
5	ARID3A	chr14:96973384-96973459	HepG2	liver:	n/a	n/a
6	ATF1	chr14:97026028-97026228	K562	blood:	n/a	n/a
7	ATF1	chr14:96968320-96968900	K562	blood:	n/a	chr14:96968699-96968713
8	ATF2	chr14:96968335-96968901	GM12878	blood:	n/a	chr14:96968699-96968713
9	ATF2	chr14:96968160-96968794	H1-hESC	embryonic stem cell:	n/a	chr14:96968699-96968713
10	BACH1	chr14:97027940-97027967	K562	blood:	n/a	n/a
11	BACH1	chr14:96968226-96968972	K562	blood:	n/a	n/a
12	BACH1	chr14:96968150-96968670	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr14:96969149-96969219	H1-hESC	embryonic stem cell:	n/a	n/a
14	BATF	chr14:96963428-96963708	GM12878	blood:	n/a	n/a
15	BCL3	chr14:96968052-96968938	A549	lung:	n/a	chr14:96968870-96968883 chr14:96968878-96968887 chr14:96968874-96968887 chr14:96968873-96968886 chr14:96968303-96968316 chr14:96968351-96968364 chr14:96968433-96968442
16	BCL3	chr14:96949985-96950252	GM12878	blood:	n/a	n/a
17	BCLAF1	chr14:96967906-96968878	GM12878	blood:	n/a	chr14:96968303-96968316 chr14:96968351-96968364 chr14:96968433-96968442
18	BCLAF1	chr14:96968913-96969704	GM12878	blood:	n/a	chr14:96969176-96969185
19	BCLAF1	chr14:96968123-96968997	GM12878	blood:	n/a	chr14:96968870-96968883 chr14:96968878-96968887 chr14:96968874-96968887 chr14:96968873-96968886 chr14:96968303-96968316 chr14:96968351-96968364 chr14:96968433-96968442
20	BHLHE40	chr14:96967868-96969564	K562	blood:	n/a	chr14:96969150-96969166 chr14:96969158-96969174
21	BHLHE40	chr14:96968130-96969386	GM12878	blood:	n/a	chr14:96969150-96969166 chr14:96969158-96969174
22	BHLHE40	chr14:96968192-96969199	HepG2	liver:	n/a	chr14:96969150-96969166 chr14:96969158-96969174
23	BHLHE40	chr14:96975974-96976436	GM12878	blood:	n/a	n/a
24	BHLHE40	chr14:96975224-96975384	HepG2	liver:	n/a	n/a
25	BRCA1	chr14:96968499-96968717	HepG2	liver:	n/a	n/a
26	BRCA1	chr14:96968825-96969250	GM12878	blood:	n/a	n/a
27	BRCA1	chr14:96968258-96968734	H1-hESC	embryonic stem cell:	n/a	n/a
28	BRCA1	chr14:96967961-96968840	Hela-S3	cervix:	n/a	n/a
29	CBX3	chr14:96968233-96968902	K562	blood:	n/a	n/a
30	CCNT2	chr14:96968151-96969594	K562	blood:	n/a	chr14:96969136-96969145
31	CCNT2	chr14:97033729-97033854	K562	blood:	n/a	n/a
32	CEBPB	chr14:96973372-96973559	HepG2	liver:	n/a	n/a
33	CEBPB	chr14:96968333-96968795	Hela-S3	cervix:	n/a	n/a
34	CEBPB	chr14:96978860-96979289	HepG2	liver:	n/a	n/a
35	CEBPB	chr14:96950728-96951068	HepG2	liver:	n/a	chr14:96950878-96950889
36	CEBPB	chr14:96968457-96968788	HepG2	liver:	n/a	n/a
37	CEBPB	chr14:96944238-96944365	H1-hESC	embryonic stem cell:	n/a	n/a
38	CEBPB	chr14:96964005-96964303	K562	blood:	n/a	chr14:96964117-96964128
39	CEBPB	chr14:96950719-96951057	K562	blood:	n/a	chr14:96950878-96950889
40	CEBPB	chr14:96963981-96964261	HepG2	liver:	n/a	chr14:96964117-96964128
41	CEBPB	chr14:97025213-97025250	K562	blood:	n/a	n/a
42	CEBPB	chr14:96996751-96996882	HepG2	liver:	n/a	chr14:96996779-96996790
43	CEBPB	chr14:96968495-96968797	K562	blood:	n/a	n/a
44	CEBPB	chr14:96950746-96950963	K562	blood:	n/a	chr14:96950878-96950889
45	CEBPD	chr14:96968165-96968773	HepG2	liver:	n/a	n/a
46	CEBPD	chr14:96968469-96968845	K562	blood:	n/a	n/a
47	CHD1	chr14:96967884-96968472	H1-hESC	embryonic stem cell:	n/a	n/a
48	CHD1	chr14:96976251-96976351	H1-hESC	embryonic stem cell:	n/a	n/a
49	CHD1	chr14:96968006-96969685	GM12878	blood:	n/a	n/a
50	CHD1	chr14:96968720-96970198	H1-hESC	embryonic stem cell:	n/a	chr14:96969749-96969756

(count:1222 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr14:96969243-96969293	MCF-7	breast:	n/a
2	chr14:96968510-96968560	HCT-116	colon:	n/a
3	chr14:96969243-96969293	MCF-7	breast:	n/a
4	chr14:96968510-96968560	HCT-116	colon:	n/a
5	chr14:96968510-96968560	AG10803	skin:	n/a
6	chr14:96972280-96972330	Hela-S3	cervix:	n/a
7	chr14:96968614-96968664	HRE	kidney:	n/a
8	chr14:97031960-97032010	BE2_C	brain:	n/a
9	chr14:96968614-96968664	GM06990	blood:	n/a
10	chr14:96972280-96972330	LNCaP	prostate:	n/a
11	chr14:96968745-96968795	SAEC	small airway:	n/a
12	chr14:96968481-96968531	HMEC	breast:	n/a
13	chr14:96970127-96970177	NH-A	brain:	n/a
14	chr14:96969303-96969353	ProgFib	skin:	n/a
15	chr14:96968481-96968531	SK-N-SH	brain:	n/a
16	chr14:96967897-96967947	AG09319	gingival:	n/a
17	chr14:97019527-97019577	PFSK-1	brain:	n/a
18	chr14:96968625-96968675	SKMC	muscle:	n/a
19	chr14:96968614-96968664	CMK	blood:	n/a
20	chr14:96968625-96968675	HCM	heart:	n/a
21	chr14:96970127-96970177	AG10803	skin:	n/a
22	chr14:96970127-96970177	Hela-S3	cervix:	n/a
23	chr14:96968625-96968675	Hela-S3	cervix:	n/a
24	chr14:96967897-96967947	GM12892	blood:	n/a
25	chr14:96968640-96968690	Hepatocyte	liver:	n/a
26	chr14:96968510-96968560	HEK293	kidney:	embryo
27	chr14:96967897-96967947	NHDF-neo	bronchial:	n/a
28	chr14:96967897-96967947	HepG2	liver:	n/a
29	chr14:96972280-96972330	H1-hESC	embryonic stem cell:	embryo
30	chr14:97031960-97032010	HIPEpiC	eye:	n/a
31	chr14:96968625-96968675	HRE	kidney:	n/a
32	chr14:97031960-97032010	ovcar-3	ovarian:	n/a
33	chr14:97031960-97032010	NB4	blood:	n/a
34	chr14:97031960-97032010	NHBE	bronchial:	n/a
35	chr14:96965678-96965728	HL-60	blood:	n/a
36	chr14:96965678-96965728	K562	blood:	n/a
37	chr14:96968050-96968100	IMR90	lung:	fetal
38	chr14:96967798-96967848	Jurkat	blood:	n/a
39	chr14:96967798-96967848	NHDF-neo	bronchial:	n/a
40	chr14:96968614-96968664	AG04449	skin:	fetal
41	chr14:96967798-96967848	HCF	heart:	n/a
42	chr14:96972280-96972330	NHDF-neo	bronchial:	n/a
43	chr14:96967825-96967875	SK-N-SH	brain:	n/a
44	chr14:96972280-96972330	NT2-D1	testis:	n/a
45	chr14:96965678-96965728	NHBE	bronchial:	n/a
46	chr14:97019527-97019577	HPAEpiC	pulmonary alveolar:	n/a
47	chr14:96968737-96968787	HRE	kidney:	n/a
48	chr14:97019527-97019577	BJ	skin:	n/a
49	chr14:96965678-96965728	GM12878	blood:	n/a
50	chr14:96967798-96967848	RPTEC	kidney:	n/a

(count:111 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr14:96953479..96956403-chr14:96967198..96969398,3	K562	blood:
2	chr14:96975313..96976857-chr14:96978601..96981439,2	MCF-7	breast:
3	chr14:96992168..96995386-chr14:96999762..97002036,3	MCF-7	breast:
4	chr14:96977104..96978800-chr20:30195099..30197047,2	MCF-7	breast:
5	chr14:96960614..96962618-chr14:96966589..96970350,3	K562	blood:
6	chr14:97018033..97019612-chr14:97020291..97022357,2	K562	blood:
7	chr14:96956955..96959176-chr14:96966805..96969527,2	K562	blood:
8	chr14:96977217..96979586-chr14:96982926..96984761,2	MCF-7	breast:
9	chr14:96968041..96970064-chr14:96987625..96989616,3	MCF-7	breast:
10	chr14:96992168..96995386-chr14:96999762..97002036,3	MCF-7	breast:
11	chr14:96828300..96831729-chr14:96966894..96970584,3	K562	blood:
12	chr14:96965294..96968379-chr14:96992362..96994561,3	MCF-7	breast:
13	chr14:96968705..96971658-chr14:97028687..97030507,2	MCF-7	breast:
14	chr14:96946909..96948979-chr14:96949809..96951767,2	MCF-7	breast:
15	chr1:151512325..151513409-chr14:96967489..96968213,3	Hela-S3	cervix:
16	chr14:97006749..97008466-chr14:97026369..97029131,2	MCF-7	breast:
17	chr14:96948001..96951041-chr14:96966273..96969529,4	MCF-7	breast:
18	chr14:96991877..96993555-chr14:97010853..97012624,2	MCF-7	breast:
19	chr14:97007480..97011210-chr14:97011511..97014615,3	K562	blood:
20	chr14:97006749..97008466-chr14:97026369..97029131,2	MCF-7	breast:
21	chr14:96954618..96956476-chr14:96968310..96969915,2	MCF-7	breast:
22	chr14:96967688..96968587-chr7:91763296..91764137,2	Hela-S3	cervix:
23	chr14:97030602..97033303-chr14:97033642..97035609,3	K562	blood:
24	chr14:96947839..96950152-chr14:96988315..96991118,2	K562	blood:
25	chr14:96973732..96976070-chr14:96984297..96985956,2	K562	blood:
26	chr14:96968572..96970585-chr14:96987828..96990250,2	K562	blood:
27	chr14:96980357..96982346-chr14:96989639..96991890,2	MCF-7	breast:
28	chr14:96828603..96830880-chr14:96964867..96966868,2	MCF-7	breast:
29	chr14:96967956..96970809-chr14:96981741..96983595,3	MCF-7	breast:
30	chr14:97011141..97013270-chr14:97015044..97017205,2	K562	blood:
31	chr14:96968195..96968730-chr5:68389846..68390449,2	Hela-S3	cervix:
32	chr14:96968408..96969093-chr7:39989276..39989838,2	Hela-S3	cervix:
33	chr14:96967194..96972735-chr14:96975570..96985371,13	K562	blood:
34	chr14:96967956..96969589-chr9:140512244..140513858,2	MCF-7	breast:
35	chr14:96968705..96971658-chr14:97028687..97030507,2	MCF-7	breast:
36	chr14:96965294..96968379-chr14:96992362..96994561,3	MCF-7	breast:
37	chr14:96944597..96947618-chr14:96962282..96964814,3	MCF-7	breast:
38	chr14:96948001..96951041-chr14:96966273..96969529,4	MCF-7	breast:
39	chr14:97023617..97026546-chr14:97637896..97640052,3	K562	blood:
40	chr14:96968331..96969256-chr17:57915231..57915767,2	Hela-S3	cervix:
41	chr14:96207305..96209332-chr14:96958131..96960093,2	MCF-7	breast:
42	chr14:96967059..96970873-chr14:97003621..97006595,4	K562	blood:
43	chr14:96968706..96970870-chr14:96989041..96991198,2	MCF-7	breast:
44	chr14:96958156..96960045-chr14:96966380..96969772,3	MCF-7	breast:
45	chr14:96985630..96987652-chr14:97013134..97015914,2	MCF-7	breast:
46	chr14:96980357..96982346-chr14:96989639..96991890,2	MCF-7	breast:
47	chr14:96968318..96970026-chr14:96990174..96992851,2	K562	blood:
48	chr1:154946395..154947268-chr14:96968464..96969240,2	Hela-S3	cervix:
49	chr14:97030602..97033303-chr14:97033642..97035609,3	K562	blood:
50	chr14:96989700..96992252-chr14:96995292..96996938,2	MCF-7	breast:

(count:10 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PAPOLA-2	chr14:96994960-96995017	ucscGeneNc_uc001yfu_2
2	lnc-PAPOLA-2	chr14:96997894-96998422	ucscGeneNc_uc001yfu_2
3	lnc-ATG2B-7	chr14:96949043-96949280	uc_381_-
4	lnc-AK7-5	chr14:97031292-97031443	NONHSAT039542
5	lnc-PAPOLA-2	chr14:96999722-97000248	ucscGeneNc_uc001yfu_2
6	lnc-AK7-5	chr14:97028795-97029230	NONHSAT039542
7	lnc-ATG2B-2	chr14:96967147-96968658	ENSG00000260806.1
8	lnc-ATG2B-2	chr14:96967985-96968630	NONHSAT039531
9	lnc-ATG2B-2	chr14:96967028-96968641	NONHSAT039529
10	lnc-PAPOLA-3	chr14:96949043-96949280	uc_381_+

No data

(count:5 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	PAPOLA	hsa-miR-93-5p	chr14:97031753-97031759
2	PAPOLA	hsa-miR-155-5p	chr14:97031585-97031607
3	PAPOLA	hsa-miR-93-5p	chr14:97031736-97031760
4	PAPOLA	hsa-miR-320a	chr14:97031785-97031808
5	PAPOLA	hsa-miR-155-5p	chr14:96998551-96998571

Variant related genes	Relation type
PAPOLA	TF binding region
ENSG00000260806	TF binding region
AK7	TF binding region
PAPOLA	CpG island
ENSG00000260806	CpG island
AK7	CpG island
ENSG00000065883	chromatin interactions
ENSG00000260806	chromatin interactions
ENSG00000170315	chromatin interactions
ENSG00000066739	chromatin interactions
ENSG00000171469	chromatin interactions
ENSG00000235706	chromatin interactions
ENSG00000228265	chromatin interactions
ENSG00000181090	chromatin interactions
ENSG00000259826	chromatin interactions
ENSG00000105323	chromatin interactions
ENSG00000224699	chromatin interactions
ENSG00000086758	chromatin interactions
ENSG00000167930	chromatin interactions
ENSG00000160691	chromatin interactions
ENSG00000143367	chromatin interactions
ENSG00000057608	chromatin interactions
ENSG00000140057	chromatin interactions
ENSG00000255198	chromatin interactions
ENSG00000140988	chromatin interactions
ENSG00000238776	chromatin interactions
ENSG00000197429	chromatin interactions
ENSG00000134248	chromatin interactions
ENSG00000232536	chromatin interactions
ENSG00000124207	chromatin interactions
ENSG00000267106	chromatin interactions
ENSG00000100744	chromatin interactions
ENSG00000265692	chromatin interactions
ENSG00000168395	chromatin interactions
ENSG00000145740	chromatin interactions
ENSG00000188693	chromatin interactions
ENSG00000125970	chromatin interactions
ENSG00000062716	chromatin interactions
ENSG00000259059	chromatin interactions
ENSG00000229980	chromatin interactions
ENSG00000203993	chromatin interactions
ENSG00000122034	chromatin interactions
ENSG00000173207	chromatin interactions
ENSG00000100697	chromatin interactions
ENSG00000141232	chromatin interactions
ENSG00000001630	chromatin interactions
ENSG00000090060	chromatin interactions

Extended variants
information (count: 3391 )
Associated
traits (count: 70 )

Variant overlapped rSNPs/rCNVs (count:3391 , 50 per page) page: 1 2 3 4 5 6 7 ... 68

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10146607	chr14:96942352-96942353	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs563801881	chr14:96942382-96942383	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs73351152	chr14:96942476-96942477	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs549586543	chr14:96942544-96942545	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs567888257	chr14:96942550-96942551	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs571411938	chr14:96942568-96942569	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs557051814	chr14:96942609-96942610	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs528720448	chr14:96942617-96942618	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs144522388	chr14:96942678-96942679	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs571854601	chr14:96942715-96942716	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs538580019	chr14:96942718-96942719	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs556726701	chr14:96942719-96942720	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs191273176	chr14:96942729-96942730	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs568923528	chr14:96942732-96942733	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs193301389	chr14:96942799-96942800	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs146627621	chr14:96942830-96942831	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs377721013	chr14:96942842-96942843	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs34683106	chr14:96942843-96942844	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs572668766	chr14:96942860-96942861	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs561287613	chr14:96942865-96942866	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs540049134	chr14:96942878-96942879	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs550560113	chr14:96942914-96942915	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs558769753	chr14:96942920-96942921	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs577111944	chr14:96942938-96942939	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs141364582	chr14:96942948-96942949	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs563570035	chr14:96942982-96942983	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs369610574	chr14:96943003-96943004	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs182827087	chr14:96943010-96943011	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs543118715	chr14:96943056-96943057	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs561381000	chr14:96943154-96943155	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs542989394	chr14:96943261-96943262	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs528652643	chr14:96943293-96943294	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs372865349	chr14:96943303-96943304	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs150240457	chr14:96943384-96943385	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs138551135	chr14:96943413-96943414	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs187467960	chr14:96943423-96943424	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs12894430	chr14:96943448-96943449	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs12894713	chr14:96943485-96943486	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs532734182	chr14:96943490-96943491	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs192173286	chr14:96943492-96943493	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs183856585	chr14:96943524-96943525	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs373075686	chr14:96943548-96943549	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs535865883	chr14:96943580-96943581	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs554204390	chr14:96943617-96943618	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs566232933	chr14:96943618-96943619	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs148849160	chr14:96943620-96943621	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs112065398	chr14:96943628-96943629	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs577053491	chr14:96943646-96943647	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs544209486	chr14:96943652-96943653	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs556445876	chr14:96943662-96943663	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:70)

Disease	PMID	Source
Esophageal cancer	21851588	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Non-small cell lung cancer	21044232	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	17899364	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Renal cell carcinoma	21668985	CNVD
Chronic myeloid leukemia	20724749	CNVD
Wilms tumour	21544195	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Colorectal cancer	16774939	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Neuroblastoma	18923191	CNVD
Barrett''s syndrome	19417022	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Basal cell lymphoma	17053054	CNVD
cataract	16735990	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Developmental delay	21147756	CNVD
Glioblastoma	21080181	CNVD
Cancer	20164920	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Biliary cancer	19435499	CNVD
Follicular lymphoma	20505157	CNVD
Acute lymphoblastic leukemia	20139093	CNVD
Hepatocellular carcinoma	16750200	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Glioblastoma multiforme	21922591	CNVD
Breast cancer	21509527	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Multiple myeloma	16616336	CNVD
small cell lung cancer	17426248	CNVD
Myelofibrosis	22110671	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Ovarian cancer	22174824	CNVD
Non-small cell lung cancer	18320023	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:2596 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:96917200-96954800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr14:96929400-96946200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr14:96939400-96947400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr14:96940600-96943400	Weak transcription	Right Atrium	heart
5	chr14:96941800-96945800	Weak transcription	HepG2	liver
6	chr14:96942000-96948200	Weak transcription	Pancreas	Pancrea
7	chr14:96943200-96944400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr14:96944600-96944800	Enhancers	Placenta	Placenta
9	chr14:96944800-96945800	Weak transcription	Placenta	Placenta
10	chr14:96945800-96946400	Enhancers	Placenta	Placenta
11	chr14:96945800-96946400	Enhancers	HepG2	liver
12	chr14:96946200-96946400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr14:96946200-96947400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr14:96946400-96947400	Weak transcription	Placenta	Placenta
15	chr14:96946400-96947400	Weak transcription	HepG2	liver
16	chr14:96946400-96949400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr14:96947000-96947400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr14:96947000-96947400	Enhancers	GM12878-XiMat	blood
19	chr14:96947000-96947400	Enhancers	HMEC	breast
20	chr14:96947000-96948600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
21	chr14:96947400-96947600	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr14:96947400-96947600	Enhancers	Placenta	Placenta
23	chr14:96947400-96947600	Enhancers	HepG2	liver
24	chr14:96947400-96952800	Weak transcription	GM12878-XiMat	blood
25	chr14:96947600-96948000	Weak transcription	HepG2	liver
26	chr14:96948000-96948800	Enhancers	HepG2	liver
27	chr14:96948200-96948600	Enhancers	Pancreas	Pancrea
28	chr14:96948600-96950800	Weak transcription	Pancreas	Pancrea
29	chr14:96949400-96949600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr14:96950200-96950800	Enhancers	Primary hematopoietic stem cells short term culture	blood
31	chr14:96950600-96951000	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
32	chr14:96952000-96953000	Enhancers	Primary B cells from cord blood	blood
33	chr14:96952400-96954400	Enhancers	Primary B cells from peripheral blood	blood
34	chr14:96952800-96953200	Enhancers	GM12878-XiMat	blood
35	chr14:96953000-96953200	Flanking Active TSS	Primary B cells from cord blood	blood
36	chr14:96953200-96953400	Enhancers	Primary B cells from cord blood	blood
37	chr14:96953200-96954000	Weak transcription	GM12878-XiMat	blood
38	chr14:96953400-96953600	Flanking Active TSS	Primary B cells from cord blood	blood
39	chr14:96953600-96954200	Enhancers	Primary B cells from cord blood	blood
40	chr14:96954000-96954200	Enhancers	GM12878-XiMat	blood
41	chr14:96954200-96956200	Weak transcription	Primary B cells from cord blood	blood
42	chr14:96954200-96959000	Weak transcription	GM12878-XiMat	blood
43	chr14:96954400-96957400	Weak transcription	Primary B cells from peripheral blood	blood
44	chr14:96956000-96956200	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr14:96956200-96956600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chr14:96956200-96959600	Enhancers	Primary B cells from cord blood	blood
47	chr14:96957400-96964400	Enhancers	Primary B cells from peripheral blood	blood
48	chr14:96959000-96960600	Enhancers	GM12878-XiMat	blood
49	chr14:96959600-96960400	Flanking Active TSS	Primary B cells from cord blood	blood
50	chr14:96960400-96961000	Enhancers	Primary B cells from cord blood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links