Variant report

Variant	esv1825865
Chromosome Location	chr7:6431933-6554222
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4465)
CpG islands
(count:4949)
Chromatin interactive
region (count:195)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:3)

(count:4465 , 50 per page) page: 1 2 3 4 5 6 7 ... 90

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:6529428-6529548	HepG2	liver:	n/a	n/a
2	ARID3A	chr7:6475284-6475749	K562	blood:	n/a	n/a
3	ARID3A	chr7:6488062-6488548	HepG2	liver:	n/a	n/a
4	ARID3A	chr7:6488139-6488172	K562	blood:	n/a	n/a
5	ARID3A	chr7:6486701-6486946	HepG2	liver:	n/a	n/a
6	ARID3A	chr7:6488936-6489138	HepG2	liver:	n/a	n/a
7	ARID3A	chr7:6523743-6524104	HepG2	liver:	n/a	n/a
8	ARID3A	chr7:6432227-6433385	K562	blood:	n/a	n/a
9	ARID3A	chr7:6529443-6529488	K562	blood:	n/a	n/a
10	ARID3A	chr7:6521920-6522237	HepG2	liver:	n/a	n/a
11	ARID3A	chr7:6522729-6523152	HepG2	liver:	n/a	n/a
12	ARID3A	chr7:6490873-6491305	K562	blood:	n/a	n/a
13	ATF1	chr7:6490921-6491255	K562	blood:	n/a	n/a
14	ATF1	chr7:6522614-6523091	K562	blood:	n/a	chr7:6522795-6522809
15	ATF1	chr7:6469907-6470154	K562	blood:	n/a	n/a
16	ATF1	chr7:6493526-6493770	K562	blood:	n/a	n/a
17	ATF1	chr7:6432902-6433406	K562	blood:	n/a	n/a
18	ATF2	chr7:6487336-6487955	GM12878	blood:	n/a	n/a
19	ATF2	chr7:6486523-6487023	H1-hESC	embryonic stem cell:	n/a	n/a
20	ATF2	chr7:6486610-6487004	H1-hESC	embryonic stem cell:	n/a	n/a
21	ATF3	chr7:6487386-6487931	A549	lung:	n/a	n/a
22	ATF3	chr7:6488046-6488342	HepG2	liver:	n/a	n/a
23	ATF3	chr7:6475163-6475532	A549	lung:	n/a	n/a
24	ATF3	chr7:6487909-6488473	A549	lung:	n/a	n/a
25	ATF3	chr7:6487977-6488395	K562	blood:	n/a	n/a
26	ATF3	chr7:6488075-6488312	K562	blood:	n/a	n/a
27	ATF3	chr7:6487423-6487720	K562	blood:	n/a	n/a
28	ATF3	chr7:6487381-6487905	A549	lung:	n/a	n/a
29	ATF3	chr7:6487978-6488464	A549	lung:	n/a	n/a
30	ATF3	chr7:6487409-6487848	K562	blood:	n/a	n/a
31	BACH1	chr7:6475273-6475570	H1-hESC	embryonic stem cell:	n/a	n/a
32	BACH1	chr7:6486734-6487392	H1-hESC	embryonic stem cell:	n/a	n/a
33	BACH1	chr7:6475300-6475426	K562	blood:	n/a	n/a
34	BACH1	chr7:6522707-6524156	H1-hESC	embryonic stem cell:	n/a	n/a
35	BATF	chr7:6488084-6488303	GM12878	blood:	n/a	n/a
36	BATF	chr7:6466755-6466947	GM12878	blood:	n/a	n/a
37	BATF	chr7:6432890-6433246	GM12878	blood:	n/a	n/a
38	BCL3	chr7:6476895-6477258	GM12878	blood:	n/a	n/a
39	BCL3	chr7:6507378-6507738	A549	lung:	n/a	n/a
40	BCL3	chr7:6487027-6487786	A549	lung:	n/a	n/a
41	BCL3	chr7:6456237-6456719	A549	lung:	n/a	n/a
42	BCL3	chr7:6443320-6444094	K562	blood:	n/a	n/a
43	BCL3	chr7:6511732-6512603	K562	blood:	n/a	n/a
44	BCL3	chr7:6519323-6519614	GM12878	blood:	n/a	n/a
45	BCL3	chr7:6493126-6493626	A549	lung:	n/a	n/a
46	BCL3	chr7:6487927-6488489	A549	lung:	n/a	n/a
47	BCL3	chr7:6487925-6488405	A549	lung:	n/a	n/a
48	BCLAF1	chr7:6523560-6524076	GM12878	blood:	n/a	chr7:6523584-6523593 chr7:6523577-6523586
49	BCLAF1	chr7:6487250-6487905	GM12878	blood:	n/a	n/a
50	BCLAF1	chr7:6432751-6433409	GM12878	blood:	n/a	n/a

(count:4949 , 50 per page) page: 1 2 3 4 5 6 7 ... 99

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:6542473-6542523	MCF-7	breast:	n/a
2	chr7:6436101-6436151	GM12891	blood:	n/a
3	chr7:6488916-6488966	GM12892	blood:	n/a
4	chr7:6523282-6523332	BE2_C	brain:	n/a
5	chr7:6522802-6522852	HAEpiC	amniotic membrane:	n/a
6	chr7:6486951-6487001	HPAEpiC	pulmonary alveolar:	n/a
7	chr7:6441810-6441860	SK-N-SH_RA	brain:	n/a
8	chr7:6483368-6483418	RPTEC	kidney:	n/a
9	chr7:6542473-6542523	MCF-7	breast:	n/a
10	chr7:6436101-6436151	GM12891	blood:	n/a
11	chr7:6488916-6488966	GM12892	blood:	n/a
12	chr7:6523282-6523332	BE2_C	brain:	n/a
13	chr7:6522802-6522852	HAEpiC	amniotic membrane:	n/a
14	chr7:6486951-6487001	HPAEpiC	pulmonary alveolar:	n/a
15	chr7:6441810-6441860	SK-N-SH_RA	brain:	n/a
16	chr7:6483368-6483418	RPTEC	kidney:	n/a
17	chr7:6460966-6461016	HEK293	kidney:	embryo
18	chr7:6541332-6541382	NT2-D1	testis:	n/a
19	chr7:6442531-6442581	CMK	blood:	n/a
20	chr7:6441974-6442024	HEK293	kidney:	embryo
21	chr7:6441810-6441860	HRE	kidney:	n/a
22	chr7:6493555-6493605	NHDF-neo	bronchial:	n/a
23	chr7:6520004-6520054	AG10803	skin:	n/a
24	chr7:6523611-6523661	HCF	heart:	n/a
25	chr7:6542473-6542523	HUVEC	blood vessel:	n/a
26	chr7:6449156-6449206	PANC-1	pancreas:	n/a
27	chr7:6522842-6522892	ovcar-3	ovarian:	n/a
28	chr7:6523896-6523946	NHDF-neo	bronchial:	n/a
29	chr7:6435144-6435194	HepG2	liver:	n/a
30	chr7:6449981-6450031	GM06990	blood:	n/a
31	chr7:6435090-6435140	RPTEC	kidney:	n/a
32	chr7:6436101-6436151	ovcar-3	ovarian:	n/a
33	chr7:6474306-6474356	ECC-1	luminal epithelium:	n/a
34	chr7:6443295-6443345	Hela-S3	cervix:	n/a
35	chr7:6522842-6522892	SKMC	muscle:	n/a
36	chr7:6550361-6550411	BE2_C	brain:	n/a
37	chr7:6474306-6474356	NB4	blood:	n/a
38	chr7:6493555-6493605	HEEpiC	esophagus:	n/a
39	chr7:6523282-6523332	NHBE	bronchial:	n/a
40	chr7:6487512-6487562	U87	brain:	n/a
41	chr7:6443295-6443345	NHDF-neo	bronchial:	n/a
42	chr7:6523917-6523967	HCPEpiC	choroid plexus:	n/a
43	chr7:6520004-6520054	HEEpiC	esophagus:	n/a
44	chr7:6476110-6476160	SKMC	muscle:	n/a
45	chr7:6476110-6476160	HCPEpiC	choroid plexus:	n/a
46	chr7:6543354-6543404	HCM	heart:	n/a
47	chr7:6461393-6461443	AoSMC	blood vessel:	n/a
48	chr7:6544329-6544379	CMK	blood:	n/a
49	chr7:6486951-6487001	NHDF-neo	bronchial:	n/a
50	chr7:6551374-6551424	HL-60	blood:	n/a

(count:195 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr7:6477471..6480538-chr7:6480717..6482413,3	K562	blood:
2	chr7:6463957..6465802-chr7:6468835..6470445,2	MCF-7	breast:
3	chr7:6533713..6536649-chr7:6538902..6541303,3	K562	blood:
4	chr7:6497678..6499764-chr7:6515399..6517836,2	K562	blood:
5	chr7:6485731..6488707-chr7:6533916..6535810,2	K562	blood:
6	chr7:6478323..6480538-chr7:6480717..6482413,2	K562	blood:
7	chr7:6503445..6506169-chr7:6511956..6514111,2	K562	blood:
8	chr7:6420136..6422492-chr7:6433519..6436270,2	MCF-7	breast:
9	chr7:6475431..6480249-chr7:6480514..6484908,6	MCF-7	breast:
10	chr7:6499717..6507603-chr7:6511410..6517764,12	K562	blood:
11	chr7:6521451..6526537-chr7:6541616..6547791,14	MCF-7	breast:
12	chr7:6523102..6525727-chr7:6628447..6631086,2	MCF-7	breast:
13	chr7:6413599..6415567-chr7:6443758..6446728,2	K562	blood:
14	chr7:6478323..6480538-chr7:6480717..6482413,2	K562	blood:
15	chr7:6515446..6517619-chr7:6541586..6543669,2	MCF-7	breast:
16	chr7:6479621..6482383-chr7:6485568..6487663,2	MCF-7	breast:
17	chr7:6450208..6453839-chr7:6454159..6457397,3	MCF-7	breast:
18	chr7:6475563..6476129-chr8:50550159..50551004,2	MCF-7	breast:
19	chr7:6501893..6503760-chr7:6541357..6543829,2	MCF-7	breast:
20	chr7:6425039..6427961-chr7:6431283..6434070,6	K562	blood:
21	chr7:6500191..6503008-chr7:6519492..6521377,2	K562	blood:
22	chr7:6454958..6457155-chr7:6459947..6462538,2	MCF-7	breast:
23	chr7:6485603..6488536-chr7:6541994..6543811,2	K562	blood:
24	chr7:6482815..6485017-chr7:6485346..6488810,3	MCF-7	breast:
25	chr7:6414178..6415764-chr7:6434413..6437205,2	K562	blood:
26	chr7:6474092..6477009-chr7:6483600..6487126,3	K562	blood:
27	chr7:6459143..6461711-chr7:6462987..6466871,3	K562	blood:
28	chr7:6521681..6526038-chr7:6526623..6531331,7	K562	blood:
29	chr7:6484395..6490398-chr7:6492212..6496662,5	MCF-7	breast:
30	chr7:6432861..6434417-chr7:6442117..6443834,2	MCF-7	breast:
31	chr7:6500350..6502598-chr7:6505904..6507972,2	MCF-7	breast:
32	chr7:6522590..6525464-chr7:6629667..6631342,2	K562	blood:
33	chr7:6488240..6490209-chr7:6490613..6492203,2	MCF-7	breast:
34	chr7:6505053..6507706-chr7:6514500..6517460,3	K562	blood:
35	chr7:6521419..6527137-chr7:6531683..6539786,11	MCF-7	breast:
36	chr7:6402943..6405122-chr7:6514612..6517402,2	K562	blood:
37	chr7:6036905..6037494-chr7:6475471..6476167,2	MCF-7	breast:
38	chr7:6143603..6145893-chr7:6507665..6509813,2	MCF-7	breast:
39	chr7:6421913..6424520-chr7:6475642..6477904,2	MCF-7	breast:
40	chr7:6412676..6416102-chr7:6462596..6465621,3	MCF-7	breast:
41	chr7:6543086..6544609-chr7:6628754..6631098,2	MCF-7	breast:
42	chr7:6495113..6497493-chr7:6497529..6500079,3	MCF-7	breast:
43	chr7:6475514..6477086-chr7:6478544..6480685,2	K562	blood:
44	chr7:6541800..6543644-chr7:6564855..6567732,2	K562	blood:
45	chr7:6499949..6501557-chr7:6518916..6521343,2	MCF-7	breast:
46	chr7:6534685..6537281-chr7:6539803..6541467,2	K562	blood:
47	chr7:6444358..6447267-chr7:6449792..6451395,2	K562	blood:
48	chr17:58217109..58217819-chr7:6541185..6541709,2	MCF-7	breast:
49	chr1:43124082..43125028-chr7:6440861..6441591,2	NB4	blood:
50	chr7:6199867..6200929-chr7:6475011..6475738,3	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-GRID2IP-4	chr7:6486625-6486971	expReg_chr7_744_-

No data

(count:3 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	KDELR2	hsa-miR-124-3p	chr7:6502588-6502582
2	KDELR2	hsa-miR-124-3p	chr7:6502583-6502602
3	KDELR2	hsa-miR-124-3p	chr7:6502583-6502596

Variant related genes	Relation type
RAC1	TF binding region
ENSG00000231359	TF binding region
ENSG00000269781	TF binding region
DAGLB	TF binding region
KDELR2	TF binding region
RAC1	CpG island
ENSG00000231359	CpG island
ENSG00000269781	CpG island
DAGLB	CpG island
KDELR2	CpG island
ENSG00000171960	chromatin interactions
ENSG00000136247	chromatin interactions
ENSG00000184575	chromatin interactions
ENSG00000205903	chromatin interactions
ENSG00000178397	chromatin interactions
ENSG00000106346	chromatin interactions
ENSG00000197956	chromatin interactions
ENSG00000232581	chromatin interactions
ENSG00000136238	chromatin interactions
ENSG00000197153	chromatin interactions
ENSG00000153044	chromatin interactions
ENSG00000269781	chromatin interactions
ENSG00000146576	chromatin interactions
ENSG00000267095	chromatin interactions
ENSG00000136240	chromatin interactions
ENSG00000164535	chromatin interactions
ENSG00000231359	chromatin interactions

Extended variants
information (count: 6313 )
Associated
traits (count: 82 )

Variant overlapped rSNPs/rCNVs (count:6313 , 50 per page) page: 1 2 3 4 5 6 7 ... 127

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs702484	chr7:6431933-6431934	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs189532330	chr7:6431952-6431953	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs180678690	chr7:6431953-6431954	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs185938785	chr7:6431958-6431959	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs534734891	chr7:6431969-6431970	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs552755886	chr7:6431975-6431976	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs191187579	chr7:6432009-6432010	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs538807605	chr7:6432025-6432026	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs139093343	chr7:6432110-6432111	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs149392402	chr7:6432126-6432127	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs542643547	chr7:6432137-6432138	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs560970354	chr7:6432149-6432150	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs35253135	chr7:6432164-6432165	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs181222678	chr7:6432205-6432206	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs836477	chr7:6432217-6432218	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
16	rs34484930	chr7:6432220-6432221	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs186661972	chr7:6432230-6432231	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs533201785	chr7:6432266-6432267	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs560892609	chr7:6432303-6432304	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs545212672	chr7:6432305-6432306	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs386709824	chr7:6432311-6432312	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs836476	chr7:6432312-6432313	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs28545021	chr7:6432338-6432339	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs567266403	chr7:6432349-6432350	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs528031725	chr7:6432359-6432360	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs191458259	chr7:6432365-6432366	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs182930553	chr7:6432372-6432373	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs34351012	chr7:6432446-6432447	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs557113485	chr7:6432477-6432478	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs569083894	chr7:6432507-6432508	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs36094359	chr7:6432519-6432520	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs187561352	chr7:6432536-6432537	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs35699473	chr7:6432543-6432544	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs564910953	chr7:6432547-6432548	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs114466953	chr7:6432554-6432555	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs543250210	chr7:6432586-6432587	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs559051085	chr7:6432603-6432604	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs75233683	chr7:6432624-6432625	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs35573362	chr7:6432646-6432647	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs573640744	chr7:6432668-6432669	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs35649698	chr7:6432692-6432693	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs530689660	chr7:6432711-6432712	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs542949669	chr7:6432725-6432726	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs550652053	chr7:6432726-6432727	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs33986000	chr7:6432750-6432751	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
46	rs35621463	chr7:6432779-6432780	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs531171948	chr7:6432819-6432820	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs139745630	chr7:6432820-6432821	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs549696768	chr7:6432862-6432863	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs571349058	chr7:6432884-6432885	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:82)

Disease	PMID	Source
Lynch syndrome	22585707	CNVD
Follicular lymphoma	20505157	CNVD
Breast cancer	16397240	CNVD
Raine Syndrome	17924334	CNVD
Diffuse large b-cell lymphoma	21266526	CNVD
Melanoma	18172304	CNVD
Sudden cardiac death	19188705	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Glioma	18556773	CNVD
Ovarian cancer	21720365	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Ovarian cancer	22174824	CNVD
Urothelial carcinoma	18382360	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Leukemia	23979775	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Bladder cancer	21909424	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	21045282	CNVD
Disorders of sex development	21048976	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Acute myeloid leukemia	21251322	CNVD
Glioblastoma multiforme	21525872	CNVD
Ependymoma	20639864	CNVD
Autism	20685689	CNVD
Amyotrophic lateral sclerosis	20685689	CNVD
Breast cancer	22522925	CNVD
Ovarian cancer	21781307	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Intracranial arachnoid cysts	20187927	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:5324 , 50 per page) page: 1 2 3 4 5 6 7 ... 107

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:6417200-6435400	Weak transcription	Fetal Brain Male	brain
2	chr7:6423000-6432400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr7:6424000-6432400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr7:6424000-6432400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr7:6425400-6432600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
6	chr7:6425600-6432200	Weak transcription	Fetal Heart	heart
7	chr7:6425800-6432600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr7:6426000-6432400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
9	chr7:6426000-6432400	Weak transcription	Ovary	ovary
10	chr7:6426000-6432400	Weak transcription	Right Atrium	heart
11	chr7:6426000-6456400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
12	chr7:6426000-6475600	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr7:6426400-6432400	Weak transcription	Psoas Muscle	Psoas
14	chr7:6426400-6457400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr7:6426600-6432000	Strong transcription	Muscle Satellite Cultured Cells	--
16	chr7:6426600-6432400	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr7:6426600-6432600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
18	chr7:6426600-6434200	Strong transcription	HUES48 Cell Line	embryonic stem cell
19	chr7:6426600-6434400	Strong transcription	iPS-20b Cell Line	embryonic stem cell
20	chr7:6426600-6436200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr7:6426800-6432400	Strong transcription	Primary B cells from peripheral blood	blood
22	chr7:6426800-6432400	Strong transcription	Primary T cells fromperipheralblood	blood
23	chr7:6426800-6432400	Strong transcription	GM12878-XiMat	blood
24	chr7:6426800-6432400	Strong transcription	HSMM	muscle
25	chr7:6426800-6432600	Strong transcription	HUES6 Cell Line	embryonic stem cell
26	chr7:6426800-6434600	Strong transcription	HepG2	liver
27	chr7:6426800-6436200	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
28	chr7:6426800-6436400	Strong transcription	HUES64 Cell Line	embryonic stem cell
29	chr7:6426800-6436600	Strong transcription	Dnd41	blood
30	chr7:6427000-6432000	Strong transcription	Primary T helper cells fromperipheralblood	blood
31	chr7:6427000-6432200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
32	chr7:6427000-6432400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr7:6427000-6432400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
34	chr7:6427000-6432400	Strong transcription	Fetal Muscle Leg	muscle
35	chr7:6427000-6433000	Strong transcription	Primary neutrophils fromperipheralblood	blood
36	chr7:6427000-6433000	Strong transcription	Fetal Thymus	thymus
37	chr7:6427000-6436400	Strong transcription	Fetal Stomach	stomach
38	chr7:6427200-6432400	Strong transcription	Osteobl	bone
39	chr7:6427200-6433600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
40	chr7:6427200-6434200	Strong transcription	Fetal Brain Female	brain
41	chr7:6427400-6432200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr7:6427400-6432400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr7:6427400-6432400	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
44	chr7:6427400-6432400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
45	chr7:6427400-6432400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
46	chr7:6427400-6432400	Strong transcription	Thymus	Thymus
47	chr7:6427400-6434600	Strong transcription	Primary T cells from cord blood	blood
48	chr7:6427600-6435600	Strong transcription	Cortex derived primary cultured neurospheres	brain
49	chr7:6428000-6432400	Weak transcription	Esophagus	oesophagus
50	chr7:6428200-6432200	Strong transcription	Adipose Nuclei	Adipose

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