The 2.0 version of rSNPBase

Variant report

Variant esv2088595
Chromosome Location chr6:2122770-2122771
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:2081600-2131800 Weak transcription Fetal Intestine Small intestine
2 chr6:2104400-2132000 Weak transcription Fetal Intestine Large intestine
3 chr6:2104600-2128200 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr6:2105200-2123400 Weak transcription Gastric stomach
5 chr6:2108000-2126400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr6:2109600-2127800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr6:2109600-2133600 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr6:2110200-2129000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr6:2111800-2127800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr6:2111800-2129000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr6:2112000-2124000 Weak transcription Primary hematopoietic stem cells blood
12 chr6:2112000-2124600 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr6:2112400-2127200 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr6:2112400-2129400 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr6:2114200-2134200 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr6:2115600-2123600 Weak transcription HUVEC blood vessel
17 chr6:2116000-2134200 Weak transcription H9 Cell Line embryonic stem cell
18 chr6:2117800-2125200 Weak transcription Primary T cells from cord blood blood
19 chr6:2118000-2131800 Weak transcription Duodenum Mucosa Duodenum
20 chr6:2118400-2123400 Weak transcription Pancreas Pancrea
21 chr6:2118600-2126400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr6:2118600-2129000 Weak transcription Aorta Aorta
23 chr6:2119200-2127800 Weak transcription Primary B cells from cord blood blood
24 chr6:2119600-2132600 Weak transcription NHEK skin
25 chr6:2119800-2124400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr6:2120200-2123400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr6:2120800-2124600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr6:2121000-2124000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr6:2121200-2125800 Strong transcription HepG2 liver
30 chr6:2121800-2124400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr6:2122000-2123200 Weak transcription Small Intestine intestine
32 chr6:2122000-2127800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr6:2122400-2127200 Weak transcription GM12878-XiMat blood
34 chr6:2122600-2123400 Enhancers Brain Germinal Matrix brain
35 chr6:2122600-2129400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015