The 2.0 version of rSNPBase

Variant report

Variant esv2454681
Chromosome Location chr2:55524244-55524244
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55509000-55541200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:55509400-55545200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr2:55510000-55541600 Weak transcription Esophagus oesophagus
4 chr2:55510000-55553600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr2:55510000-55578800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr2:55510200-55542200 Weak transcription Fetal Intestine Large intestine
7 chr2:55510200-55559000 Weak transcription Psoas Muscle Psoas
8 chr2:55510200-55616800 Weak transcription Fetal Intestine Small intestine
9 chr2:55510400-55529000 Weak transcription Placenta Placenta
10 chr2:55510600-55533800 Weak transcription Pancreas Pancrea
11 chr2:55510600-55536600 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr2:55510600-55537400 Weak transcription Lung lung
13 chr2:55510800-55542200 Weak transcription Rectal Smooth Muscle rectum
14 chr2:55511000-55540600 Weak transcription Spleen Spleen
15 chr2:55511200-55542200 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr2:55511200-55547000 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr2:55512000-55549800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr2:55512400-55577400 Weak transcription Right Ventricle heart
19 chr2:55512600-55525000 Weak transcription Gastric stomach
20 chr2:55512600-55546000 Weak transcription Small Intestine intestine
21 chr2:55513200-55525400 Strong transcription Fetal Thymus thymus
22 chr2:55513600-55531400 Strong transcription Dnd41 blood
23 chr2:55514800-55549600 Strong transcription iPS-20b Cell Line embryonic stem cell
24 chr2:55515800-55550400 Strong transcription HUES64 Cell Line embryonic stem cell
25 chr2:55516200-55525400 Strong transcription HUES48 Cell Line embryonic stem cell
26 chr2:55516400-55527800 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr2:55518600-55532200 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr2:55518600-55591400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr2:55519400-55524400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr2:55519400-55529400 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr2:55519400-55533400 Weak transcription Stomach Smooth Muscle stomach
32 chr2:55519800-55579000 Weak transcription Primary B cells from cord blood blood
33 chr2:55520000-55538800 Weak transcription Ovary ovary
34 chr2:55520000-55541200 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr2:55520200-55529000 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr2:55520200-55531600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr2:55520200-55539000 Weak transcription Primary neutrophils fromperipheralblood blood
38 chr2:55520200-55554400 Weak transcription Duodenum Mucosa Duodenum
39 chr2:55520400-55591200 Strong transcription Monocytes-CD14+_RO01746 blood
40 chr2:55521200-55529400 Strong transcription Osteobl bone
41 chr2:55521400-55591000 Strong transcription Primary monocytes fromperipheralblood blood
42 chr2:55521600-55526000 Strong transcription Hela-S3 cervix
43 chr2:55521600-55529600 Strong transcription HepG2 liver
44 chr2:55521800-55525400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr2:55521800-55531600 Strong transcription Fetal Muscle Trunk muscle
46 chr2:55522000-55525200 Strong transcription Brain Germinal Matrix brain
47 chr2:55522200-55526000 Strong transcription Fetal Muscle Leg muscle
48 chr2:55522400-55524400 Strong transcription Left Ventricle heart
49 chr2:55522600-55524800 Strong transcription Fetal Stomach stomach
50 chr2:55522800-55529600 Strong transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015