Variant report

Variant	esv2763143
Chromosome Location	chr19:36805705-36847498
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:390)
CpG islands
(count:612)
Chromatin interactive
region (count:0)
LncRNA
region (count:28)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:390 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr19:36822690-36822768	K562	blood:	n/a	n/a
2	BACH1	chr19:36822319-36822665	H1-hESC	embryonic stem cell:	n/a	n/a
3	BHLHE40	chr19:36822590-36822698	K562	blood:	n/a	n/a
4	BHLHE40	chr19:36822480-36822814	GM12878	blood:	n/a	n/a
5	CEBPB	chr19:36830460-36830486	A549	lung:	n/a	n/a
6	CEBPB	chr19:36822504-36822774	H1-hESC	embryonic stem cell:	n/a	n/a
7	CHD1	chr19:36821511-36822557	H1-hESC	embryonic stem cell:	n/a	n/a
8	CHD2	chr19:36822351-36823045	H1-hESC	embryonic stem cell:	n/a	n/a
9	CHD2	chr19:36822518-36822932	GM12878	blood:	n/a	n/a
10	CREB1	chr19:36822370-36822951	H1-hESC	embryonic stem cell:	n/a	n/a
11	CREB1	chr19:36822377-36823060	H1-hESC	embryonic stem cell:	n/a	n/a
12	CTCF	chr19:36822480-36822630	GM12874	blood:	n/a	n/a
13	CTCF	chr19:36806218-36806352	K562	blood:	n/a	n/a
14	CTCF	chr19:36822440-36822590	WERI-Rb-1	eye:	n/a	n/a
15	CTCF	chr19:36817200-36817236	Kidney_OC	kidney:	n/a	n/a
16	CTCF	chr19:36806206-36806350	HepG2	liver:	n/a	n/a
17	CTCF	chr19:36822480-36822630	HCPEpiC	choroid plexus:	n/a	n/a
18	CTCF	chr19:36822560-36822710	HUVEC	blood vessel:	n/a	n/a
19	CTCF	chr19:36822500-36822650	GM12873	blood:	n/a	n/a
20	CTCF	chr19:36822516-36822545	Fibrobl	skin:	n/a	n/a
21	CTCF	chr19:36840481-36840536	GM13976	blood:	n/a	n/a
22	CTCF	chr19:36822260-36822410	GM12871	blood:	n/a	n/a
23	CTCF	chr19:36822400-36822550	HBMEC	blood vessel:	n/a	n/a
24	CTCF	chr19:36807273-36807403	LNCaP	prostate:	n/a	n/a
25	CTCF	chr19:36822500-36822650	HCM	heart:	n/a	n/a
26	CTCF	chr19:36822520-36822670	GM12873	blood:	n/a	n/a
27	CTCF	chr19:36822583-36822628	GM12878	blood:	n/a	n/a
28	CTCF	chr19:36822480-36822630	HEK293	kidney:	n/a	n/a
29	CTCF	chr19:36822320-36822470	GM12869	blood:	n/a	n/a
30	CTCF	chr19:36822475-36822648	GM19238	blood:	n/a	n/a
31	CTCF	chr19:36822540-36822690	GM12866	blood:	n/a	n/a
32	CTCF	chr19:36806185-36806275	GM13977	blood:	n/a	n/a
33	CTCF	chr19:36822417-36822830	Spleen_OC	spleen:	n/a	n/a
34	CTCF	chr19:36806212-36806306	Kidney_OC	kidney:	n/a	n/a
35	CTCF	chr19:36822580-36822730	BE2_C	brain:	n/a	n/a
36	CTCF	chr19:36822960-36823110	SK-N-SH_RA	brain:	n/a	n/a
37	CTCF	chr19:36806224-36806345	GM19240	blood:	n/a	n/a
38	CTCF	chr19:36822320-36822470	NHDF-neo	bronchial:	n/a	n/a
39	CTCF	chr19:36806249-36806279	GM13976	blood:	n/a	n/a
40	CTCF	chr19:36806192-36806349	GM19238	blood:	n/a	n/a
41	CTCF	chr19:36822600-36822750	HBMEC	blood vessel:	n/a	n/a
42	CTCF	chr19:36806260-36806283	MCF-7	breast:	n/a	n/a
43	CTCF	chr19:36820718-36820760	Lung_OC	lung:	n/a	n/a
44	CTCF	chr19:36822420-36822570	HEK293	kidney:	n/a	n/a
45	CTCF	chr19:36822500-36822650	HMEC	breast:	n/a	n/a
46	CTCF	chr19:36822523-36822604	GM12891	blood:	n/a	n/a
47	CTCF	chr19:36806287-36806329	MCF-7	breast:	n/a	n/a
48	CTCF	chr19:36806198-36806353	GM12892	blood:	n/a	n/a
49	CTCF	chr19:36822520-36822670	HPF	lung:	n/a	n/a
50	CTCF	chr19:36822500-36822650	HPAF	blood vessel:	n/a	n/a

(count:612 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:36822770-36822820	GM19239	blood:	n/a
2	chr19:36822442-36822492	HCF	heart:	n/a
3	chr19:36822770-36822820	GM19239	blood:	n/a
4	chr19:36822442-36822492	HCF	heart:	n/a
5	chr19:36827430-36827480	AG10803	skin:	n/a
6	chr19:36822549-36822599	ProgFib	skin:	n/a
7	chr19:36818607-36818657	HNPCEpiC	eye:	n/a
8	chr19:36818607-36818657	CMK	blood:	n/a
9	chr19:36822564-36822614	NHDF-neo	bronchial:	n/a
10	chr19:36822311-36822361	SK-N-SH	brain:	n/a
11	chr19:36822564-36822614	SK-N-SH_RA	brain:	n/a
12	chr19:36827430-36827480	NHBE	bronchial:	n/a
13	chr19:36818607-36818657	HepG2	liver:	n/a
14	chr19:36822442-36822492	HL-60	blood:	n/a
15	chr19:36833695-36833745	CMK	blood:	n/a
16	chr19:36827430-36827480	PFSK-1	brain:	n/a
17	chr19:36818607-36818657	HCF	heart:	n/a
18	chr19:36833695-36833745	LNCaP	prostate:	n/a
19	chr19:36822442-36822492	AG09309	skin:	n/a
20	chr19:36822672-36822722	HRE	kidney:	n/a
21	chr19:36833695-36833745	Jurkat	blood:	n/a
22	chr19:36818607-36818657	BJ	skin:	n/a
23	chr19:36827430-36827480	HPAEpiC	pulmonary alveolar:	n/a
24	chr19:36822549-36822599	MCF-7	breast:	n/a
25	chr19:36822442-36822492	AG10803	skin:	n/a
26	chr19:36833695-36833745	GM12892	blood:	n/a
27	chr19:36822770-36822820	SK-N-MC	brain:	n/a
28	chr19:36822549-36822599	BE2_C	brain:	n/a
29	chr19:36822442-36822492	CMK	blood:	n/a
30	chr19:36822311-36822361	Hepatocyte	liver:	n/a
31	chr19:36822311-36822361	AG04449	skin:	fetal
32	chr19:36822549-36822599	Hela-S3	cervix:	n/a
33	chr19:36822672-36822722	SK-N-SH	brain:	n/a
34	chr19:36822770-36822820	A549	lung:	n/a
35	chr19:36818607-36818657	HIPEpiC	eye:	n/a
36	chr19:36833695-36833745	HNPCEpiC	eye:	n/a
37	chr19:36822311-36822361	RPTEC	kidney:	n/a
38	chr19:36822770-36822820	PrEC	prostate:	n/a
39	chr19:36822549-36822599	HUVEC	blood vessel:	n/a
40	chr19:36833695-36833745	K562	blood:	n/a
41	chr19:36822564-36822614	AG10803	skin:	n/a
42	chr19:36827430-36827480	BE2_C	brain:	n/a
43	chr19:36822672-36822722	A549	lung:	n/a
44	chr19:36827430-36827480	HCM	heart:	n/a
45	chr19:36822311-36822361	ovcar-3	ovarian:	n/a
46	chr19:36833695-36833745	GM06990	blood:	n/a
47	chr19:36833695-36833745	HAEpiC	amniotic membrane:	n/a
48	chr19:36822549-36822599	AG04449	skin:	fetal
49	chr19:36825565-36825615	RPTEC	kidney:	n/a
50	chr19:36833695-36833745	HIPEpiC	eye:	n/a

No data

(count:28 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF146-1	chr19:36811922-36812079	XLOC_013054
2	lnc-ZFP14-1	chr19:36812895-36812932	ENSG00000232677
3	lnc-ZFP14-1	chr19:36812202-36812259	ENSG00000232677
4	lnc-ZFP14-1	chr19:36813032-36813112	ENSG00000232677
5	lnc-ZFP14-1	chr19:36806262-36806430	ENSG00000232677
6	lnc-ZFP14-1	chr19:36806859-36806972	ENSG00000232677
7	lnc-ZFP14-1	chr19:36807080-36807229	NONHSAT065986
8	lnc-ZFP14-1	chr19:36806478-36806972	ENSG00000232677.2
9	lnc-ZFP14-1	chr19:36812895-36812933	NONHSAT065992
10	lnc-ZFP14-1	chr19:36803969-36806639	ENSG00000232677.2
11	lnc-ZFP14-1	chr19:36812202-36812259	NONHSAT065992
12	lnc-ZNF146-1	chr19:36811922-36812194	XLOC_013054
13	lnc-ZFP14-1	chr19:36813032-36813286	ENSG00000232677
14	lnc-ZFP14-1	chr19:36806859-36807236	NONHSAT065983
15	lnc-ZFP14-1	chr19:36813032-36813130	ENSG00000232677.2
16	lnc-ZNF146-1	chr19:36811922-36812260	XLOC_013054
17	lnc-ZFP14-1	chr19:36813032-36813127	ENSG00000232677
18	lnc-ZFP14-1	chr19:36811026-36811662	NONHSAT065992
19	lnc-ZFP14-1	chr19:36812895-36812932	ENSG00000232677.2
20	lnc-ZFP14-1	chr19:36812202-36812259	ENSG00000232677.2
21	lnc-ZFP14-1	chr19:36806859-36806972	NONHSAT065986
22	lnc-ZFP14-1	chr19:36812202-36812259	ENSG00000232677
23	lnc-ZFP14-1	chr19:36822349-36822602	ENSG00000232677
24	lnc-ZFP14-1	chr19:36812895-36812932	ENSG00000232677
25	lnc-ZFP14-1	chr19:36806859-36806972	ENSG00000232677
26	lnc-ZFP14-1	chr19:36812202-36812259	ENSG00000232677
27	lnc-ZFP14-1	chr19:36811507-36811662	ENSG00000232677
28	lnc-ZFP14-1	chr19:36812895-36812932	ENSG00000232677

No data

Variant related genes	Relation type
LINC00665	TF binding region
ENSG00000222730	TF binding region
LINC00665	CpG island
ENSG00000222730	CpG island
SLC35F5	miRNA target sites

Extended variants
information (count: 1610 )
Associated
traits (count: 60 )

Variant overlapped rSNPs/rCNVs (count:1610 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs543735964	chr19:36805706-36805707	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
2	rs369894192	chr19:36805731-36805732	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
3	rs562551633	chr19:36805834-36805835	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
4	rs577558169	chr19:36805920-36805921	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
5	rs76224545	chr19:36805999-36806000	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
6	rs374809021	chr19:36806000-36806001	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
7	rs144885602	chr19:36806066-36806067	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
8	rs546342677	chr19:36806067-36806068	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
9	rs397968769	chr19:36806068-36806069	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
10	rs75070203	chr19:36806069-36806070	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
11	rs397830412	chr19:36806087-36806088	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
12	rs2972640	chr19:36806118-36806119	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
13	rs559770211	chr19:36806134-36806135	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
14	rs527506982	chr19:36806162-36806163	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
15	rs548736164	chr19:36806176-36806177	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
16	rs560911521	chr19:36806244-36806245	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
17	rs549428848	chr19:36806289-36806290	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
18	rs368893799	chr19:36806313-36806314	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
19	rs148976822	chr19:36806314-36806315	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
20	rs149844108	chr19:36806330-36806331	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
21	rs72623859	chr19:36806431-36806432	ZNF genes & repeats Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
22	rs202051708	chr19:36806432-36806433	ZNF genes & repeats Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
23	rs549795283	chr19:36806469-36806470	ZNF genes & repeats Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
24	rs571623740	chr19:36806471-36806472	ZNF genes & repeats Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
25	rs55676133	chr19:36806475-36806476	ZNF genes & repeats Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
26	rs3752724	chr19:36806503-36806504	ZNF genes & repeats Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
27	rs3752725	chr19:36806508-36806509	ZNF genes & repeats Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
28	rs547931763	chr19:36806516-36806517	ZNF genes & repeats Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
29	rs566144422	chr19:36806529-36806530	ZNF genes & repeats Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
30	rs536728711	chr19:36806584-36806585	ZNF genes & repeats Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
31	rs555171021	chr19:36806588-36806589	ZNF genes & repeats Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
32	rs200746265	chr19:36806598-36806599	ZNF genes & repeats Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
33	rs10425490	chr19:36806625-36806626	ZNF genes & repeats Weak transcription Strong transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs376593733	chr19:36806667-36806668	ZNF genes & repeats Weak transcription Strong transcription	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
35	rs537790566	chr19:36806696-36806697	ZNF genes & repeats Weak transcription Strong transcription	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
36	rs535048473	chr19:36806701-36806702	ZNF genes & repeats Weak transcription Strong transcription	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
37	rs184455213	chr19:36806708-36806709	ZNF genes & repeats Weak transcription Strong transcription	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
38	rs558946940	chr19:36806715-36806716	ZNF genes & repeats Weak transcription Strong transcription	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
39	rs577221685	chr19:36806737-36806738	ZNF genes & repeats Weak transcription Strong transcription	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
40	rs547168575	chr19:36806775-36806776	ZNF genes & repeats Weak transcription Strong transcription	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
41	rs544577669	chr19:36806794-36806795	ZNF genes & repeats Weak transcription Strong transcription	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
42	rs559833360	chr19:36806816-36806817	Strong transcription Weak transcription ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
43	rs13345089	chr19:36806827-36806828	Strong transcription Weak transcription ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
44	rs386808991	chr19:36806843-36806844	Strong transcription Weak transcription ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
45	rs114970552	chr19:36806844-36806845	Strong transcription Weak transcription ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
46	rs561186577	chr19:36806858-36806859	Strong transcription Weak transcription ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
47	rs62115241	chr19:36806866-36806867	Strong transcription Weak transcription ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
48	rs200685267	chr19:36806870-36806871	Strong transcription Weak transcription ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
49	rs201847869	chr19:36806871-36806872	Strong transcription Weak transcription ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
50	rs199967412	chr19:36806927-36806928	Strong transcription Weak transcription ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:60)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Ductal carcinoma	22052326	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21858162	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Ovarian cancer	21397856	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Ovarian cancer	20844748	CNVD
Non-small cell lung cancer	21829676	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Cancer	21183584	CNVD
Honadal dysgenesis	21048976	CNVD
Neurodevelopmental disorder	22521361	CNVD
Endometrial cancer	23636398	CNVD
Disorders of sex development	21048976	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21364760	CNVD
Invasive pancreatic ductal carcinoma	18765526	CNVD
Rhabdomyosarcoma	16790082	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Glioma	17123091	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Multiple myeloma	16616336	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:1427 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:36799000-36806600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr19:36799400-36806400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr19:36799400-36816400	Weak transcription	Primary T cells from cord blood	blood
4	chr19:36799600-36806600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr19:36799800-36809600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr19:36800400-36810000	Weak transcription	Placenta	Placenta
7	chr19:36800600-36806600	Weak transcription	Fetal Stomach	stomach
8	chr19:36800600-36810400	Weak transcription	Esophagus	oesophagus
9	chr19:36800600-36811200	Weak transcription	Pancreas	Pancrea
10	chr19:36800600-36816400	Weak transcription	Ovary	ovary
11	chr19:36800600-36816600	Weak transcription	Spleen	Spleen
12	chr19:36800800-36806400	Weak transcription	H1 Cell Line	embryonic stem cell
13	chr19:36800800-36806400	Weak transcription	Left Ventricle	heart
14	chr19:36800800-36806600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr19:36800800-36808200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
16	chr19:36800800-36810000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr19:36800800-36816400	Weak transcription	Brain Inferior Temporal Lobe	brain
18	chr19:36800800-36822000	Weak transcription	Psoas Muscle	Psoas
19	chr19:36801000-36806600	Weak transcription	HUES6 Cell Line	embryonic stem cell
20	chr19:36801000-36810200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr19:36801000-36816400	Weak transcription	Stomach Smooth Muscle	stomach
22	chr19:36801200-36806200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr19:36801200-36806200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
24	chr19:36801200-36806400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
25	chr19:36801200-36806400	Weak transcription	Duodenum Smooth Muscle	Duodenum
26	chr19:36801200-36806400	Weak transcription	Fetal Brain Female	brain
27	chr19:36801200-36806600	Weak transcription	Fetal Intestine Large	intestine
28	chr19:36801200-36806600	Weak transcription	Fetal Muscle Trunk	muscle
29	chr19:36801200-36810200	Weak transcription	Brain Cingulate Gyrus	brain
30	chr19:36801200-36810400	Weak transcription	Brain Germinal Matrix	brain
31	chr19:36801200-36814400	Weak transcription	Primary B cells from cord blood	blood
32	chr19:36801200-36816000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
33	chr19:36801200-36816200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr19:36801200-36816400	Weak transcription	Primary B cells from peripheral blood	blood
35	chr19:36801200-36816400	Weak transcription	Adipose Nuclei	Adipose
36	chr19:36801200-36816600	Weak transcription	Right Ventricle	heart
37	chr19:36801200-36817000	Weak transcription	Brain Anterior Caudate	brain
38	chr19:36801200-36817000	Weak transcription	Fetal Kidney	kidney
39	chr19:36801200-36817600	Weak transcription	Skeletal Muscle Male	skeletal muscle
40	chr19:36801600-36809800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
41	chr19:36802200-36815800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr19:36802600-36806400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
43	chr19:36802800-36816400	Weak transcription	Brain Hippocampus Middle	brain
44	chr19:36803000-36806400	Weak transcription	Fetal Muscle Leg	muscle
45	chr19:36803200-36808000	Weak transcription	H9 Cell Line	embryonic stem cell
46	chr19:36804000-36811600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
47	chr19:36804000-36820600	Strong transcription	HUES48 Cell Line	embryonic stem cell
48	chr19:36804200-36811200	Weak transcription	Fetal Lung	lung
49	chr19:36804600-36808600	Weak transcription	Cortex derived primary cultured neurospheres	brain
50	chr19:36804800-36806400	Weak transcription	HUES64 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links