Variant report

Variant	esv3327671
Chromosome Location	chr9:141020431-141022329
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 87 )
Associated
traits (count: 19 )

Variant overlapped rSNPs/rCNVs (count:87 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs536517500	chr9:141020436-141020437	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs551151496	chr9:141020437-141020438	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs71495307	chr9:141020447-141020448	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs12350308	chr9:141020454-141020455	ZNF genes & repeats Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs531008530	chr9:141020463-141020464	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs62579508	chr9:141020483-141020484	ZNF genes & repeats Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
7	rs544863607	chr9:141020497-141020498	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs558747440	chr9:141020499-141020500	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs71510872	chr9:141020534-141020535	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs71510873	chr9:141020566-141020567	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs4876930	chr9:141020633-141020634	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs566706157	chr9:141020669-141020670	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs11791148	chr9:141020673-141020674	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs559083150	chr9:141020696-141020697	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs575854360	chr9:141020716-141020717	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs566526632	chr9:141020791-141020792	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs369462290	chr9:141020792-141020793	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs376769411	chr9:141020795-141020796	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs9314646	chr9:141020813-141020814	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs372689807	chr9:141020815-141020816	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs573792713	chr9:141020847-141020848	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs542525754	chr9:141020852-141020853	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs373540148	chr9:141020857-141020858	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs4876931	chr9:141020876-141020877	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs376894522	chr9:141020913-141020914	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs4876932	chr9:141020934-141020935	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs4876933	chr9:141020937-141020938	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs373006748	chr9:141020964-141020965	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs71269010	chr9:141020978-141020979	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs11794481	chr9:141020996-141020997	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs4876934	chr9:141020998-141020999	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs11793201	chr9:141021029-141021030	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs11794000	chr9:141021059-141021060	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs79300996	chr9:141021074-141021075	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs564618478	chr9:141021108-141021109	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs530554111	chr9:141021119-141021120	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs11794003	chr9:141021120-141021121	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs377034692	chr9:141021160-141021161	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs62579510	chr9:141021180-141021181	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs187497929	chr9:141021268-141021269	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs35972412	chr9:141021277-141021278	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs530319338	chr9:141021280-141021281	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs370316465	chr9:141021300-141021301	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs546937064	chr9:141021306-141021307	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs35367837	chr9:141021337-141021338	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs375012981	chr9:141021361-141021362	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs369726536	chr9:141021397-141021398	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs34671407	chr9:141021401-141021402	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs367953689	chr9:141021421-141021422	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs370690103	chr9:141021426-141021427	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:19)

Disease	PMID	Source
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Cardiac fibroma	18329553	CNVD
Lung cancer	19147751	CNVD
Cervical cancer	17311676	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Chordoma	18071362	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Sudden cardiac death	19188705	CNVD
Myoepithelioma	18604193	CNVD
Tuberous sclerosis	19566914	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Mantle cell lymphoma	19029149	CNVD

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:140988200-141044600	Weak transcription	Right Atrium	heart
2	chr9:141012600-141022200	Weak transcription	Brain Angular Gyrus	brain
3	chr9:141019000-141020800	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
4	chr9:141020600-141020800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell

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