Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr20:25817889-25818079	HepG2	liver:	n/a	n/a
2	POLR2A	chr20:25819913-25820151	HepG2	liver:	n/a	n/a
3	POLR2A	chr20:25820154-25820202	HepG2	liver:	n/a	n/a
4	POLR2A	chr20:25819058-25819226	HepG2	liver:	n/a	n/a
5	POLR2A	chr20:25821300-25821582	HepG2	liver:	n/a	n/a
6	POLR2A	chr20:25820671-25821117	HepG2	liver:	n/a	n/a
7	POLR2A	chr20:25821213-25821296	HepG2	liver:	n/a	n/a
8	POLR2A	chr20:25820272-25820281	HepG2	liver:	n/a	n/a

Variant related genes	Relation type
ENSG00000250090	TF binding region

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs6115316	chr20:25819122-25819123	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs6115317	chr20:25819131-25819132	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs112556828	chr20:25820178-25820179	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs62214067	chr20:25820899-25820900	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs2263729	chr20:25821018-25821019	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs541853302	chr20:25821054-25821055	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs188610973	chr20:25821228-25821229	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs112622984	chr20:25821289-25821290	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:44)

Disease	PMID	Source
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	19627613	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Colorectal cancer	19359472	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Central neurocytomas	17123091	CNVD
Colorectal cancer	16272173	CNVD
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Urothelial carcinoma	21177765	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Colorectal cancer	21645411	CNVD
Lung cancer	18438408	CNVD
Autism	22495311	CNVD
Anaplastic large cell lymphoma	18179710	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Bladder cancer	21909424	CNVD
Esophageal cancer	21851588	CNVD
Chordoma	18071362	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
Colorectal cancer	16774939	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be: