Variant report

Variant	esv3348896
Chromosome Location	chr2:55429540-55498552
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2206)
CpG islands
(count:2627)
Chromatin interactive
region (count:114)
LncRNA
region (count:10)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:2206 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr2:55450390-55450572	K562	blood:	n/a	n/a
2	ARID3A	chr2:55454827-55454947	K562	blood:	n/a	n/a
3	ARID3A	chr2:55496079-55496648	HepG2	liver:	n/a	n/a
4	ARID3A	chr2:55466768-55467114	HepG2	liver:	n/a	n/a
5	ARID3A	chr2:55459183-55460292	HepG2	liver:	n/a	n/a
6	ATF1	chr2:55456490-55456547	K562	blood:	n/a	n/a
7	ATF1	chr2:55454851-55455480	K562	blood:	n/a	n/a
8	ATF2	chr2:55459128-55460231	GM12878	blood:	n/a	n/a
9	ATF2	chr2:55458899-55460028	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr2:55458796-55460366	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF2	chr2:55464037-55464538	GM12878	blood:	n/a	n/a
12	ATF2	chr2:55463140-55464509	H1-hESC	embryonic stem cell:	n/a	n/a
13	ATF2	chr2:55462825-55463402	H1-hESC	embryonic stem cell:	n/a	n/a
14	ATF2	chr2:55496023-55496744	GM12878	blood:	n/a	n/a
15	ATF2	chr2:55496054-55496589	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr2:55461348-55461866	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF2	chr2:55459114-55460522	GM12878	blood:	n/a	n/a
18	ATF2	chr2:55496074-55496639	H1-hESC	embryonic stem cell:	n/a	n/a
19	ATF2	chr2:55496025-55496883	GM12878	blood:	n/a	n/a
20	ATF3	chr2:55495945-55496752	A549	lung:	n/a	n/a
21	ATF3	chr2:55459035-55459942	A549	lung:	n/a	n/a
22	ATF3	chr2:55495727-55496643	A549	lung:	n/a	n/a
23	ATF3	chr2:55458927-55460317	A549	lung:	n/a	n/a
24	BACH1	chr2:55495852-55496650	H1-hESC	embryonic stem cell:	n/a	n/a
25	BACH1	chr2:55450562-55450925	H1-hESC	embryonic stem cell:	n/a	n/a
26	BATF	chr2:55496203-55496583	GM12878	blood:	n/a	n/a
27	BCL11A	chr2:55496170-55496563	GM12878	blood:	n/a	n/a
28	BCL3	chr2:55495902-55496848	A549	lung:	n/a	chr2:55496096-55496109
29	BCL3	chr2:55495510-55496662	A549	lung:	n/a	chr2:55496096-55496109
30	BCL3	chr2:55458961-55460747	A549	lung:	n/a	chr2:55459307-55459316
31	BCL3	chr2:55496202-55496581	GM12878	blood:	n/a	n/a
32	BCL3	chr2:55462736-55464796	A549	lung:	n/a	chr2:55464104-55464113
33	BCL3	chr2:55458688-55460236	A549	lung:	n/a	chr2:55459307-55459316
34	BCL3	chr2:55461606-55462520	A549	lung:	n/a	n/a
35	BCLAF1	chr2:55495968-55496709	GM12878	blood:	n/a	chr2:55496096-55496109
36	BCLAF1	chr2:55459032-55460058	GM12878	blood:	n/a	chr2:55459307-55459316
37	BCLAF1	chr2:55463895-55464498	GM12878	blood:	n/a	chr2:55464104-55464113
38	BCLAF1	chr2:55496004-55496844	K562	blood:	n/a	chr2:55496096-55496109
39	BCLAF1	chr2:55450339-55450864	GM12878	blood:	n/a	n/a
40	BCLAF1	chr2:55495891-55496691	GM12878	blood:	n/a	chr2:55496096-55496109
41	BCLAF1	chr2:55463286-55463850	GM12878	blood:	n/a	n/a
42	BCLAF1	chr2:55459276-55460435	GM12878	blood:	n/a	chr2:55459307-55459316
43	BCLAF1	chr2:55495967-55496768	K562	blood:	n/a	chr2:55496096-55496109
44	BCLAF1	chr2:55460093-55460733	GM12878	blood:	n/a	n/a
45	BHLHE40	chr2:55497679-55497736	K562	blood:	n/a	n/a
46	BHLHE40	chr2:55459225-55460576	GM12878	blood:	n/a	n/a
47	BHLHE40	chr2:55459085-55460430	HepG2	liver:	n/a	n/a
48	BHLHE40	chr2:55469863-55469879	GM12878	blood:	n/a	n/a
49	BHLHE40	chr2:55495943-55496589	K562	blood:	n/a	n/a
50	BHLHE40	chr2:55459059-55460621	K562	blood:	n/a	n/a

(count:2627 , 50 per page) page: 1 2 3 4 5 6 7 ... 53

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr2:55458451-55458501	HNPCEpiC	eye:	n/a
2	chr2:55459201-55459251	AG10803	skin:	n/a
3	chr2:55458451-55458501	HL-60	blood:	n/a
4	chr2:55460012-55460062	HEK293	kidney:	embryo
5	chr2:55458451-55458501	HNPCEpiC	eye:	n/a
6	chr2:55459201-55459251	AG10803	skin:	n/a
7	chr2:55458451-55458501	HL-60	blood:	n/a
8	chr2:55460012-55460062	HEK293	kidney:	embryo
9	chr2:55459073-55459123	AoSMC	blood vessel:	n/a
10	chr2:55459782-55459832	AG10803	skin:	n/a
11	chr2:55496384-55496434	AG04449	skin:	fetal
12	chr2:55496144-55496194	GM12892	blood:	n/a
13	chr2:55496552-55496602	HEEpiC	esophagus:	n/a
14	chr2:55477848-55477898	PFSK-1	brain:	n/a
15	chr2:55458422-55458472	ECC-1	luminal epithelium:	n/a
16	chr2:55493212-55493262	HepG2	liver:	n/a
17	chr2:55450737-55450787	HCF	heart:	n/a
18	chr2:55459779-55459829	GM19239	blood:	n/a
19	chr2:55450823-55450873	AG04449	skin:	fetal
20	chr2:55496004-55496054	HepG2	liver:	n/a
21	chr2:55458963-55459013	PrEC	prostate:	n/a
22	chr2:55453474-55453524	HCF	heart:	n/a
23	chr2:55458963-55459013	NHDF-neo	bronchial:	n/a
24	chr2:55460177-55460227	A549	lung:	n/a
25	chr2:55460405-55460455	CMK	blood:	n/a
26	chr2:55459843-55459893	AG09309	skin:	n/a
27	chr2:55450823-55450873	HEEpiC	esophagus:	n/a
28	chr2:55496144-55496194	HCF	heart:	n/a
29	chr2:55450823-55450873	HCT-116	colon:	n/a
30	chr2:55446669-55446719	HPAEpiC	pulmonary alveolar:	n/a
31	chr2:55459612-55459662	ECC-1	luminal epithelium:	n/a
32	chr2:55460177-55460227	HUVEC	blood vessel:	n/a
33	chr2:55496462-55496512	HMEC	breast:	n/a
34	chr2:55496552-55496602	GM06990	blood:	n/a
35	chr2:55459779-55459829	HNPCEpiC	eye:	n/a
36	chr2:55459201-55459251	HNPCEpiC	eye:	n/a
37	chr2:55453474-55453524	HMEC	breast:	n/a
38	chr2:55460043-55460093	ProgFib	skin:	n/a
39	chr2:55459735-55459785	K562	blood:	n/a
40	chr2:55450577-55450627	NB4	blood:	n/a
41	chr2:55460012-55460062	BJ	skin:	n/a
42	chr2:55459759-55459809	HPAEpiC	pulmonary alveolar:	n/a
43	chr2:55459779-55459829	HL-60	blood:	n/a
44	chr2:55496371-55496421	HAEpiC	amniotic membrane:	n/a
45	chr2:55450823-55450873	ProgFib	skin:	n/a
46	chr2:55446669-55446719	AoSMC	blood vessel:	n/a
47	chr2:55496390-55496440	NHBE	bronchial:	n/a
48	chr2:55458963-55459013	NB4	blood:	n/a
49	chr2:55459201-55459251	H1-hESC	embryonic stem cell:	embryo
50	chr2:55460177-55460227	SK-N-SH	brain:	n/a

(count:114 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr2:55496311..55498089-chr2:55508225..55509799,2	MCF-7	breast:
2	chr2:55458825..55461494-chr2:55489314..55491027,2	MCF-7	breast:
3	chr2:55491409..55498987-chr2:55507178..55511380,11	MCF-7	breast:
4	chr2:55496021..55497900-chr2:55843389..55845266,2	K562	blood:
5	chr2:55495879..55496701-chr7:143598878..143599680,2	HCT-116	colon:
6	chr2:55437973..55440553-chr2:55504006..55505515,2	K562	blood:
7	chr2:55275648..55277729-chr2:55462893..55465890,2	K562	blood:
8	chr2:55462896..55465238-chr2:55491054..55493846,2	MCF-7	breast:
9	chr2:55466265..55468556-chr2:55485634..55487612,2	MCF-7	breast:
10	chr2:55435664..55437797-chr2:55450159..55452087,2	MCF-7	breast:
11	chr2:55468652..55470899-chr2:55494882..55496931,2	MCF-7	breast:
12	chr2:55490801..55492846-chr2:55494879..55496493,2	K562	blood:
13	chr2:55494631..55497013-chr2:55842868..55845390,2	MCF-7	breast:
14	chr2:55458156..55461118-chr2:55494163..55499368,6	MCF-7	breast:
15	chr2:55313997..55316994-chr2:55461231..55462844,2	K562	blood:
16	chr11:120172949..120175534-chr2:55468115..55470994,2	MCF-7	breast:
17	chr2:55275304..55279887-chr2:55458370..55461390,5	K562	blood:
18	chr2:55446836..55449379-chr2:55449395..55451739,2	MCF-7	breast:
19	chr2:55475194..55477770-chr2:55494963..55497132,2	MCF-7	breast:
20	chr2:55468640..55470171-chr2:55482025..55483624,2	MCF-7	breast:
21	chr2:55458256..55462359-chr2:55494864..55497801,3	K562	blood:
22	chr2:55463171..55466180-chr2:55659869..55661423,3	MCF-7	breast:
23	chr17:56707291..56709390-chr2:55464798..55466329,2	MCF-7	breast:
24	chr2:55439611..55442389-chr2:55444067..55447159,3	K562	blood:
25	chr2:55447082..55449248-chr2:55452286..55454032,2	MCF-7	breast:
26	chr2:55439611..55442389-chr2:55444067..55447159,3	K562	blood:
27	chr2:55120040..55122606-chr2:55452810..55455603,2	K562	blood:
28	chr2:55480502..55483270-chr2:55485037..55488051,3	K562	blood:
29	chr2:55480148..55483393-chr2:55492366..55494655,3	K562	blood:
30	chr2:55462241..55464416-chr2:55656583..55659722,3	MCF-7	breast:
31	chr2:55459912..55461600-chr2:55842449..55844888,2	K562	blood:
32	chr2:55464242..55465805-chr2:55843421..55845196,2	MCF-7	breast:
33	chr2:55494928..55498059-chr2:55506695..55512310,8	K562	blood:
34	chr2:55445674..55448372-chr2:55457401..55459208,2	MCF-7	breast:
35	chr2:55457538..55465596-chr2:55493335..55497971,13	MCF-7	breast:
36	chr2:55346562..55348270-chr2:55453778..55456492,2	K562	blood:
37	chr2:55461063..55464036-chr2:55678930..55681673,2	MCF-7	breast:
38	chr2:55275729..55276355-chr2:55459417..55460280,3	Hela-S3	cervix:
39	chr2:55274992..55277411-chr2:55494676..55497816,3	K562	blood:
40	chr2:55497553..55499335-chr2:55513107..55515419,2	K562	blood:
41	chr2:55439611..55442665-chr2:55443845..55449055,6	K562	blood:
42	chr2:55435664..55437797-chr2:55450159..55452087,2	MCF-7	breast:
43	chr2:55483346..55485243-chr2:55507754..55509735,2	MCF-7	breast:
44	chr2:55463589..55465767-chr2:55732207..55734884,2	MCF-7	breast:
45	chr2:55466265..55468556-chr2:55485634..55487612,2	MCF-7	breast:
46	chr2:55469201..55471074-chr2:55473270..55475726,2	K562	blood:
47	chr2:55459243..55461012-chr2:55645151..55647509,2	MCF-7	breast:
48	chr2:55489175..55493124-chr2:55494672..55498680,8	MCF-7	breast:
49	chr2:55439611..55442665-chr2:55443845..55449055,6	K562	blood:
50	chr2:55471561..55473794-chr2:55479566..55481301,2	MCF-7	breast:

(count:10 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RPS27A-2	chr2:55451416-55451646	NONHSAT070769
2	lnc-MTIF2-3	chr2:55449371-55449629	NONHSAT070768
3	lnc-MTIF2-1	chr2:55441523-55442286	ENSG00000203327.2
4	lnc-MTIF2-1	chr2:55443111-55443262	ENSG00000203327.2
5	lnc-MTIF2-3	chr2:55445481-55445736	NONHSAT070768
6	lnc-MTIF2-3	chr2:55445256-55445736	NONHSAT070767
7	lnc-MTIF2-3	chr2:55459372-55459439	NONHSAT070763
8	lnc-MTIF2-3	chr2:55459372-55459399	NONHSAT070767
9	lnc-MTIF2-3	chr2:55459372-55459428	NONHSAT070768
10	lnc-RPS27A-2	chr2:55451842-55453044	NONHSAT070769

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	RPS27A	hsa-miR-17-5p	chr2:55462628-55462651

Variant related genes	Relation type
ENSG00000227799	TF binding region
RPS27A	TF binding region
CLHC1	TF binding region
ENSG00000203327	TF binding region
MTIF2	TF binding region
ENSG00000227799	CpG island
RPS27A	CpG island
CLHC1	CpG island
ENSG00000203327	CpG island
MTIF2	CpG island
ENSG00000170634	chromatin interactions
ENSG00000206964	chromatin interactions
ENSG00000227799	chromatin interactions
ENSG00000272606	chromatin interactions
ENSG00000139437	chromatin interactions
ENSG00000068878	chromatin interactions
ENSG00000111196	chromatin interactions
ENSG00000115355	chromatin interactions
ENSG00000138041	chromatin interactions
ENSG00000162994	chromatin interactions
ENSG00000085760	chromatin interactions
ENSG00000038002	chromatin interactions
ENSG00000212195	chromatin interactions
ENSG00000115310	chromatin interactions
ENSG00000143947	chromatin interactions
ENSG00000165458	chromatin interactions
ENSG00000162997	chromatin interactions
ENSG00000202538	chromatin interactions
ENSG00000197780	chromatin interactions
ENSG00000140939	chromatin interactions
ENSG00000198420	chromatin interactions
ENSG00000255135	chromatin interactions

Extended variants
information (count: 3108 )
Associated
traits (count: 78 )

Variant overlapped rSNPs/rCNVs (count:3108 , 50 per page) page: 1 2 3 4 5 6 7 ... 63

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs566718081	chr2:55429569-55429570	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs368789508	chr2:55429595-55429596	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs549258489	chr2:55429618-55429619	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs569190458	chr2:55429619-55429620	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs184546207	chr2:55429623-55429624	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs139649035	chr2:55429629-55429630	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs577249578	chr2:55429647-55429648	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs189019175	chr2:55429648-55429649	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs368647719	chr2:55429649-55429650	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs553055795	chr2:55429658-55429659	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs77904023	chr2:55429692-55429693	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs78523920	chr2:55429693-55429694	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs573062449	chr2:55429713-55429714	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs542037124	chr2:55429720-55429721	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs562018861	chr2:55429725-55429726	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs575922071	chr2:55429773-55429774	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs142841060	chr2:55429833-55429834	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs564150631	chr2:55429862-55429863	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs532884048	chr2:55429869-55429870	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs546670747	chr2:55429907-55429908	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs1987124	chr2:55429921-55429922	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs560296859	chr2:55429942-55429943	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs34720924	chr2:55429976-55429977	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs529064403	chr2:55430016-55430017	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs372344346	chr2:55430026-55430027	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs567269782	chr2:55430033-55430034	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs561773889	chr2:55430034-55430035	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs79410686	chr2:55430036-55430037	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs111501380	chr2:55430051-55430052	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs144251443	chr2:55430069-55430070	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs182585167	chr2:55430087-55430088	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs538171867	chr2:55430104-55430105	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs148711098	chr2:55430128-55430129	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs545164632	chr2:55430158-55430159	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs539461931	chr2:55430177-55430178	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs72916760	chr2:55430251-55430252	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs185509752	chr2:55430259-55430260	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs560433708	chr2:55430322-55430323	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs555575961	chr2:55430398-55430399	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs142468968	chr2:55430577-55430578	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs544936743	chr2:55430607-55430608	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs564627289	chr2:55430667-55430668	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs577524790	chr2:55430688-55430689	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs540248272	chr2:55430693-55430694	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs189197288	chr2:55430715-55430716	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs529024260	chr2:55430717-55430718	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs550573840	chr2:55430718-55430719	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs76826174	chr2:55430733-55430734	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs562741358	chr2:55430790-55430791	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs369106418	chr2:55430849-55430850	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:78)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17387387	CNVD
Neuroblastoma	17533364	CNVD
Neuroblastoma	18923191	CNVD
Endometrial cancer	22040021	CNVD
Adrenal tumor	17535989	CNVD
Breast cancer	21264507	CNVD
Basal cell lymphoma	17053054	CNVD
Medulloblastoma	17522785	CNVD
Cancer	23418310	CNVD
Breast cancer	17603634	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Ependymoma	16718352	CNVD
lymphocytic leukemia	21291569	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	20505157	CNVD
Autism	17483303	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Medulloblastoma	20607354	CNVD
Leukemia	18628472	CNVD
Autism	22495311	CNVD
Autism	18522746	CNVD
Breast cancer	21785460	CNVD
Lung cancer	18438408	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21508638	CNVD
Neurodevelopmental disorder	22521361	CNVD
Melanoma	18172304	CNVD
Cancer	16751803	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Williams Syndrome	20824207	CNVD
Breast cancer	16272173	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Ovarian cancer	21720365	CNVD
abnormal development	18461090	CNVD
Retinoblastoma	22278416	CNVD
Cancer	21183584	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	17053054	CNVD
Hereditary non-polyposis colorectal cancer	19566914	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
Mental retardation	19951919	CNVD
Myelofibrosis	22110671	CNVD
Microcephaly	20799320	CNVD
camptodactyly	20799320	CNVD
cognitive delay	20799320	CNVD
prenatal and postnatal growth deficiency	20799320	CNVD
ptosis of eyelids	20799320	CNVD
Maculopathy	20981449	CNVD
2p16.1 microdeletion syndrome	22283845	CNVD
Autism	22579565	CNVD
Autism	16963482	CNVD
Autism	21750575	CNVD
idiopathic intellectual disability	16963482	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Multiple myeloma	16616336	CNVD
Follicular lymphoma	17699855	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	22522925	CNVD
Melanoma	20877625	CNVD

Chromatin state (count:2812 , 50 per page) page: 1 2 3 4 5 6 7 ... 57

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:55397200-55450000	Weak transcription	NH-A	brain
2	chr2:55402800-55450000	Weak transcription	NHDF-Ad	bronchial
3	chr2:55403200-55431800	Weak transcription	Fetal Brain Male	brain
4	chr2:55415400-55450000	Weak transcription	GM12878-XiMat	blood
5	chr2:55416800-55450000	Weak transcription	Rectal Smooth Muscle	rectum
6	chr2:55417400-55450200	Weak transcription	Placenta	Placenta
7	chr2:55417800-55439200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr2:55417800-55450000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr2:55418400-55433600	Weak transcription	Brain Anterior Caudate	brain
10	chr2:55419200-55429600	Weak transcription	Fetal Intestine Large	intestine
11	chr2:55419400-55434400	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr2:55419600-55431800	Weak transcription	Fetal Heart	heart
13	chr2:55420400-55433800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr2:55420600-55433600	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr2:55421000-55433600	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr2:55421800-55432000	Weak transcription	Skeletal Muscle Male	skeletal muscle
17	chr2:55423200-55438800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
18	chr2:55423600-55431000	Weak transcription	Gastric	stomach
19	chr2:55423800-55432800	Weak transcription	Pancreas	Pancrea
20	chr2:55423800-55448000	Weak transcription	HSMM	muscle
21	chr2:55424200-55432600	Weak transcription	HSMMtube	muscle
22	chr2:55424200-55432800	Weak transcription	NHEK	skin
23	chr2:55424200-55450000	Weak transcription	Muscle Satellite Cultured Cells	--
24	chr2:55424400-55434200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr2:55424400-55435000	Weak transcription	Osteobl	bone
26	chr2:55424400-55442200	Weak transcription	Duodenum Smooth Muscle	Duodenum
27	chr2:55424600-55430200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr2:55424600-55430200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr2:55424600-55430800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr2:55424600-55431200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr2:55424600-55442800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
32	chr2:55424600-55449800	Weak transcription	Thymus	Thymus
33	chr2:55424600-55450000	Weak transcription	Brain Inferior Temporal Lobe	brain
34	chr2:55424600-55450200	Weak transcription	Brain Germinal Matrix	brain
35	chr2:55424600-55451200	Weak transcription	HepG2	liver
36	chr2:55424800-55434000	Weak transcription	Stomach Smooth Muscle	stomach
37	chr2:55424800-55450200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
38	chr2:55425000-55430800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
39	chr2:55425600-55449800	Weak transcription	Fetal Muscle Trunk	muscle
40	chr2:55427000-55430000	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
41	chr2:55427000-55432200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr2:55427200-55430000	Weak transcription	Colon Smooth Muscle	Colon
43	chr2:55427400-55432600	Weak transcription	Fetal Stomach	stomach
44	chr2:55427400-55432600	Weak transcription	Lung	lung
45	chr2:55427400-55433800	Weak transcription	Fetal Thymus	thymus
46	chr2:55427400-55434200	Weak transcription	Sigmoid Colon	Sigmoid Colon
47	chr2:55427400-55450200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
48	chr2:55427400-55450200	Weak transcription	Aorta	Aorta
49	chr2:55427400-55450600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr2:55427400-55450600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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