Variant report

Variant	esv3356530
Chromosome Location	chr19:53301807-53342968
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:390)
CpG islands
(count:671)
Chromatin interactive
region (count:9)
LncRNA
region (count:11)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:390 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr19:53324738-53324945	H1-hESC	embryonic stem cell:	n/a	n/a
2	BATF	chr19:53336721-53337013	GM12878	blood:	n/a	chr19:53336917-53336927 chr19:53336913-53336923 chr19:53336723-53336732 chr19:53336898-53336906
3	BATF	chr19:53336688-53337003	GM12878	blood:	n/a	chr19:53336917-53336927 chr19:53336913-53336923 chr19:53336723-53336732 chr19:53336898-53336906
4	BHLHE40	chr19:53324867-53324898	K562	blood:	n/a	n/a
5	CBX3	chr19:53303091-53303540	K562	blood:	n/a	n/a
6	CBX3	chr19:53324640-53325255	K562	blood:	n/a	n/a
7	CBX3	chr19:53303081-53303524	K562	blood:	n/a	n/a
8	CEBPB	chr19:53329012-53329572	K562	blood:	n/a	n/a
9	CEBPB	chr19:53328995-53329384	K562	blood:	n/a	n/a
10	CEBPB	chr19:53319087-53319167	HepG2	liver:	n/a	chr19:53319119-53319130
11	CEBPB	chr19:53329098-53329325	K562	blood:	n/a	n/a
12	CEBPB	chr19:53329092-53329271	MCF-7	breast:	n/a	n/a
13	CEBPB	chr19:53329163-53329370	H1-hESC	embryonic stem cell:	n/a	n/a
14	CEBPD	chr19:53329085-53329417	K562	blood:	n/a	n/a
15	CTCF	chr19:53304620-53304770	K562	blood:	n/a	n/a
16	CTCF	chr19:53328417-53328457	K562	blood:	n/a	n/a
17	CTCF	chr19:53324980-53325130	SK-N-SH_RA	brain:	n/a	chr19:53325004-53325017
18	CTCF	chr19:53324957-53325018	GM12892	blood:	n/a	chr19:53325004-53325017
19	CTCF	chr19:53324891-53325076	GM19238	blood:	n/a	chr19:53325004-53325017
20	CTCF	chr19:53324966-53325041	GM19239	blood:	n/a	chr19:53325004-53325017
21	CTCF	chr19:53324899-53325011	GM13976	blood:	n/a	n/a
22	CTCF	chr19:53324543-53324634	Lung_OC	lung:	n/a	n/a
23	CTCF	chr19:53324940-53325090	AG04449	skin:	n/a	chr19:53325004-53325017
24	CTCF	chr19:53324957-53324996	GM13977	blood:	n/a	n/a
25	CTCF	chr19:53333123-53333177	Kidney_OC	kidney:	n/a	n/a
26	CTCF	chr19:53324761-53325046	K562	blood:	n/a	chr19:53325004-53325017
27	CTCF	chr19:53325872-53325890	LNCaP	prostate:	n/a	n/a
28	CTCF	chr19:53304200-53304350	GM12801	blood:	n/a	n/a
29	CTCF	chr19:53324949-53325037	LNCaP	prostate:	n/a	chr19:53325004-53325017
30	CTCF	chr19:53324895-53325063	K562	blood:	n/a	chr19:53325004-53325017
31	CTCF	chr19:53324940-53325090	HUVEC	blood vessel:	n/a	chr19:53325004-53325017
32	CTCF	chr19:53324920-53325004	Pancreas_OC	pancreas:	n/a	n/a
33	CTCF	chr19:53324925-53325031	MCF-7	breast:	n/a	chr19:53325004-53325017
34	CTCF	chr19:53324864-53325078	Lung_OC	lung:	n/a	chr19:53325004-53325017
35	CTCF	chr19:53324879-53325039	GM12891	blood:	n/a	chr19:53325004-53325017
36	CTCF	chr19:53325000-53325150	HBMEC	blood vessel:	n/a	chr19:53325004-53325017
37	CTCF	chr19:53324980-53325130	AoAF	blood vessel:	n/a	chr19:53325004-53325017
38	CTCF	chr19:53324960-53325034	MCF-7	breast:	n/a	chr19:53325004-53325017
39	CTCF	chr19:53324980-53325130	SAEC	small airway:	n/a	chr19:53325004-53325017
40	CTCF	chr19:53324459-53324474	GM19238	blood:	n/a	n/a
41	CTCF	chr19:53325357-53325460	LNCaP	prostate:	n/a	n/a
42	CTCF	chr19:53328020-53328170	HCPEpiC	choroid plexus:	n/a	n/a
43	CTCF	chr19:53325000-53325150	HCPEpiC	choroid plexus:	n/a	chr19:53325004-53325017
44	CTCF	chr19:53324779-53325090	Spleen_OC	spleen:	n/a	chr19:53325004-53325017
45	CTCF	chr19:53324785-53325148	K562	blood:	n/a	chr19:53325004-53325017
46	CTCF	chr19:53324938-53325019	MCF-7	breast:	n/a	chr19:53325004-53325017
47	CTCF	chr19:53325011-53325045	GM12878	blood:	n/a	n/a
48	CTCF	chr19:53324966-53325041	Kidney_OC	kidney:	n/a	chr19:53325004-53325017
49	CTCF	chr19:53324960-53325110	HMEC	breast:	n/a	chr19:53325004-53325017
50	CTCF	chr19:53324904-53325077	GM19240	blood:	n/a	chr19:53325004-53325017

(count:671 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:53325080-53325130	T-47D	breast:	n/a
2	chr19:53326219-53326269	K562	blood:	n/a
3	chr19:53325913-53325963	NHBE	bronchial:	n/a
4	chr19:53325104-53325154	ovcar-3	ovarian:	n/a
5	chr19:53325080-53325130	MCF-7	breast:	n/a
6	chr19:53324198-53324248	HCPEpiC	choroid plexus:	n/a
7	chr19:53325913-53325963	ovcar-3	ovarian:	n/a
8	chr19:53325913-53325963	HL-60	blood:	n/a
9	chr19:53324278-53324328	HL-60	blood:	n/a
10	chr19:53326091-53326141	T-47D	breast:	n/a
11	chr19:53325913-53325963	PrEC	prostate:	n/a
12	chr19:53325913-53325963	AG04450	lung:	fetal
13	chr19:53342580-53342630	PrEC	prostate:	n/a
14	chr19:53326219-53326269	IMR90	lung:	fetal
15	chr19:53326219-53326269	HRPEpiC	eye:	n/a
16	chr19:53325913-53325963	AG04449	skin:	fetal
17	chr19:53324278-53324328	SAEC	small airway:	n/a
18	chr19:53326091-53326141	Hela-S3	cervix:	n/a
19	chr19:53326219-53326269	HepG2	liver:	n/a
20	chr19:53324732-53324782	HepG2	liver:	n/a
21	chr19:53342580-53342630	AG09309	skin:	n/a
22	chr19:53324732-53324782	NB4	blood:	n/a
23	chr19:53324198-53324248	HEEpiC	esophagus:	n/a
24	chr19:53302456-53302506	SAEC	small airway:	n/a
25	chr19:53342580-53342630	K562	blood:	n/a
26	chr19:53326219-53326269	HEEpiC	esophagus:	n/a
27	chr19:53342580-53342630	GM06990	blood:	n/a
28	chr19:53325913-53325963	AoSMC	blood vessel:	n/a
29	chr19:53324732-53324782	H1-hESC	embryonic stem cell:	embryo
30	chr19:53324278-53324328	HCPEpiC	choroid plexus:	n/a
31	chr19:53324732-53324782	Caco-2	colon:	n/a
32	chr19:53325080-53325130	HRE	kidney:	n/a
33	chr19:53324278-53324328	NH-A	brain:	n/a
34	chr19:53326219-53326269	NH-A	brain:	n/a
35	chr19:53303448-53303498	SAEC	small airway:	n/a
36	chr19:53342580-53342630	SK-N-SH_RA	brain:	n/a
37	chr19:53303448-53303498	HCM	heart:	n/a
38	chr19:53326219-53326269	SK-N-SH_RA	brain:	n/a
39	chr19:53303448-53303498	AG09319	gingival:	n/a
40	chr19:53302456-53302506	HIPEpiC	eye:	n/a
41	chr19:53326219-53326269	AG10803	skin:	n/a
42	chr19:53326091-53326141	GM06990	blood:	n/a
43	chr19:53324278-53324328	HNPCEpiC	eye:	n/a
44	chr19:53302456-53302506	A549	lung:	n/a
45	chr19:53325913-53325963	SAEC	small airway:	n/a
46	chr19:53326091-53326141	HEK293	kidney:	embryo
47	chr19:53326091-53326141	AoSMC	blood vessel:	n/a
48	chr19:53342580-53342630	IMR90	lung:	fetal
49	chr19:53342580-53342630	HRPEpiC	eye:	n/a
50	chr19:53325080-53325130	HUVEC	blood vessel:	n/a

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:53288948..53291766-chr19:53301308..53304079,2	K562	blood:
2	chr19:53324392..53324894-chr19:53934932..53935516,2	MCF-7	breast:
3	chr19:53335113..53339470-chr19:53340101..53344099,5	K562	blood:
4	chr19:53324497..53325251-chr19:53360339..53360857,4	MCF-7	breast:
5	chr19:53322321..53326212-chr19:53359321..53361245,3	K562	blood:
6	chr19:53335113..53339470-chr19:53340101..53344099,5	K562	blood:
7	chr19:53322321..53326212-chr19:53359240..53361245,4	K562	blood:
8	chr19:53339213..53341134-chr20:46203984..46206130,2	MCF-7	breast:
9	chr19:53338835..53341536-chr19:53343202..53344870,2	K562	blood:

(count:11 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF701-2	chr19:53301030-53301858	NONHSAT067586
2	lnc-ZNF468-1	chr19:53341785-53345404	NR_102299
3	lnc-ZNF468-1	chr19:53341785-53345404	NR_102301
4	lnc-ZNF468-3	chr19:53321197-53321284	NONHSAT067588
5	lnc-ZNF468-3	chr19:53317537-53317679	NONHSAT067589
6	lnc-ZNF701-2	chr19:53342913-53343520	NONHSAT067585
7	lnc-ZNF468-3	chr19:53321197-53321281	NONHSAT067589
8	lnc-ZNF468-3	chr19:53311129-53311386	NONHSAT067588
9	lnc-ZNF701-2	chr19:53300917-53301869	NONHSAT067585
10	lnc-ZNF468-3	chr19:53324839-53324886	NONHSAT067588
11	lnc-ZNF468-1	chr19:53341785-53345404	NR_102300

No data

Variant related genes	Relation type
ZNF28	TF binding region
ENSG00000255875	TF binding region
ZNF28	CpG island
ENSG00000255875	CpG island
ENSG00000204604	chromatin interactions
ENSG00000241015	chromatin interactions
ENSG00000189190	chromatin interactions
ENSG00000198538	chromatin interactions
ENSG00000160336	chromatin interactions

Extended variants
information (count: 2198 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:2198 , 50 per page) page: 1 2 3 4 5 6 7 ... 44

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7253764	chr19:53301808-53301809	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
2	rs192896534	chr19:53301819-53301820	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
3	rs371207217	chr19:53301831-53301832	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
4	rs202072929	chr19:53301867-53301868	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
5	rs34599433	chr19:53301877-53301878	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs56327714	chr19:53301878-53301879	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs398059837	chr19:53301881-53301882	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs551258904	chr19:53301987-53301988	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs375226510	chr19:53301988-53301989	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs530208129	chr19:53301989-53301990	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs548298374	chr19:53302025-53302026	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs149207502	chr19:53302027-53302028	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs533588277	chr19:53302048-53302049	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs7248697	chr19:53302057-53302058	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
15	rs142460682	chr19:53302061-53302062	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs183378789	chr19:53302086-53302087	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs556018148	chr19:53302117-53302118	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs574610296	chr19:53302126-53302127	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs73936419	chr19:53302179-53302180	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs113544382	chr19:53302252-53302253	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs191565995	chr19:53302257-53302258	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs540693916	chr19:53302262-53302263	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs183636509	chr19:53302264-53302265	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs577279518	chr19:53302320-53302321	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs141562216	chr19:53302325-53302326	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs567413726	chr19:53302371-53302372	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs534203181	chr19:53302376-53302377	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs10407516	chr19:53302453-53302454	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
29	rs530359938	chr19:53302456-53302457	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs34964374	chr19:53302464-53302465	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs546844401	chr19:53302474-53302475	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs548496427	chr19:53302479-53302480	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs10407539	chr19:53302481-53302482	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
34	rs527395218	chr19:53302489-53302490	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs538279572	chr19:53302493-53302494	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs186504807	chr19:53302527-53302528	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs147045862	chr19:53302559-53302560	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs550088835	chr19:53302578-53302579	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs10408156	chr19:53302622-53302623	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
40	rs575039843	chr19:53302624-53302625	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs192672365	chr19:53302639-53302640	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs138371643	chr19:53302678-53302679	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs142480960	chr19:53302695-53302696	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs185550273	chr19:53302699-53302700	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs559075349	chr19:53302712-53302713	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs371465484	chr19:53302723-53302724	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs544610019	chr19:53302724-53302725	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs115119333	chr19:53302726-53302727	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs10410012	chr19:53302737-53302738	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
50	rs542469740	chr19:53302764-53302765	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Cancer	20164920	CNVD
Melanoma	17363583	CNVD
Breast cancer	21785460	CNVD
Adrenocortical carcinoma	18281524	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:1309 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:53290800-53302400	Weak transcription	Brain Germinal Matrix	brain
2	chr19:53294600-53311400	ZNF genes & repeats	Liver	Liver
3	chr19:53296200-53324000	Weak transcription	Fetal Brain Male	brain
4	chr19:53297400-53314000	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
5	chr19:53299200-53305000	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr19:53299200-53311400	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr19:53299200-53314000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr19:53299200-53314000	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
9	chr19:53299200-53314000	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr19:53299200-53314000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr19:53299600-53314000	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr19:53299600-53314000	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
13	chr19:53299800-53314000	ZNF genes & repeats	Primary hematopoietic stem cells	blood
14	chr19:53300000-53303200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr19:53300000-53308200	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
16	chr19:53300200-53305600	ZNF genes & repeats	Fetal Brain Female	brain
17	chr19:53300200-53306600	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr19:53300400-53302200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr19:53300400-53308200	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
20	chr19:53301000-53305800	ZNF genes & repeats	Brain Angular Gyrus	brain
21	chr19:53301000-53308000	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr19:53301000-53308400	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
23	chr19:53301000-53314000	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr19:53301200-53302000	ZNF genes & repeats	Left Ventricle	heart
25	chr19:53301400-53302000	ZNF genes & repeats	Pancreas	Pancrea
26	chr19:53301400-53305000	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
27	chr19:53301400-53305600	ZNF genes & repeats	Muscle Satellite Cultured Cells	--
28	chr19:53301400-53306000	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
29	chr19:53301400-53306000	ZNF genes & repeats	Skeletal Muscle Female	skeletal muscle
30	chr19:53301400-53308000	ZNF genes & repeats	Fetal Lung	lung
31	chr19:53301400-53308800	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
32	chr19:53301400-53309200	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
33	chr19:53301400-53309600	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
34	chr19:53301400-53309600	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
35	chr19:53301400-53310200	ZNF genes & repeats	Adipose Nuclei	Adipose
36	chr19:53301400-53312000	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr19:53301400-53314000	ZNF genes & repeats	Duodenum Mucosa	Duodenum
38	chr19:53301600-53302000	Weak transcription	Placenta	Placenta
39	chr19:53301600-53302000	Strong transcription	K562	blood
40	chr19:53301600-53302400	Strong transcription	Ovary	ovary
41	chr19:53301600-53303200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr19:53301600-53304400	ZNF genes & repeats	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
43	chr19:53301600-53305600	ZNF genes & repeats	Dnd41	blood
44	chr19:53301600-53307800	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
45	chr19:53301600-53308200	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
46	chr19:53301800-53302600	ZNF genes & repeats	ES-WA7 Cell Line	embryonic stem cell
47	chr19:53301800-53303600	Weak transcription	Fetal Thymus	thymus
48	chr19:53301800-53308200	ZNF genes & repeats	Brain Hippocampus Middle	brain
49	chr19:53301800-53308600	ZNF genes & repeats	Primary T cells from cord blood	blood
50	chr19:53302000-53303200	Weak transcription	Pancreas	Pancrea

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