Variant report

Variant	esv3376897
Chromosome Location	chr9:13277977-13280925
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr9:13278032-13278621	K562	blood:	n/a	n/a
2	BACH1	chr9:13278144-13278639	H1-hESC	embryonic stem cell:	n/a	n/a
3	BACH1	chr9:13279363-13279954	H1-hESC	embryonic stem cell:	n/a	n/a
4	BHLHE40	chr9:13278045-13278680	K562	blood:	n/a	n/a
5	BHLHE40	chr9:13279384-13279648	K562	blood:	n/a	n/a
6	CCNT2	chr9:13279271-13279892	K562	blood:	n/a	chr9:13279622-13279631
7	CCNT2	chr9:13278210-13278873	K562	blood:	n/a	n/a
8	CEBPD	chr9:13279233-13279576	HepG2	liver:	n/a	n/a
9	CHD2	chr9:13279452-13279788	K562	blood:	n/a	n/a
10	CHD2	chr9:13279406-13279700	HepG2	liver:	n/a	n/a
11	CHD2	chr9:13278750-13278753	HepG2	liver:	n/a	n/a
12	CHD2	chr9:13279436-13279848	H1-hESC	embryonic stem cell:	n/a	n/a
13	CHD2	chr9:13278431-13278782	H1-hESC	embryonic stem cell:	n/a	chr9:13278434-13278444
14	CHD2	chr9:13279455-13279700	Hela-S3	cervix:	n/a	n/a
15	CREB1	chr9:13279252-13279948	HepG2	liver:	n/a	n/a
16	CREB1	chr9:13277932-13278478	K562	blood:	n/a	chr9:13278215-13278228
17	CREB1	chr9:13278371-13278850	A549	lung:	n/a	n/a
18	CREB1	chr9:13279298-13279841	A549	lung:	n/a	n/a
19	CREB1	chr9:13279395-13279883	H1-hESC	embryonic stem cell:	n/a	n/a
20	CTBP2	chr9:13278130-13279032	H1-hESC	embryonic stem cell:	n/a	n/a
21	CTCF	chr9:13278800-13278950	HEK293	kidney:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
22	CTCF	chr9:13278860-13279010	HFF	foreskin:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
23	CTCF	chr9:13278840-13278990	AG09309	skin:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
24	CTCF	chr9:13278800-13278950	HBMEC	blood vessel:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
25	CTCF	chr9:13279600-13279750	HMEC	breast:	n/a	n/a
26	CTCF	chr9:13278834-13278939	MCF-7	breast:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
27	CTCF	chr9:13278760-13278910	K562	blood:	n/a	chr9:13278884-13278897
28	CTCF	chr9:13278820-13278970	HVMF	connective:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
29	CTCF	chr9:13278820-13278970	AG10803	skin:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
30	CTCF	chr9:13278860-13279010	SK-N-SH_RA	brain:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
31	CTCF	chr9:13278800-13278950	HPF	lung:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
32	CTCF	chr9:13278722-13279014	IMR90	lung:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
33	CTCF	chr9:13278760-13278910	HEEpiC	esophagus:	n/a	chr9:13278884-13278897
34	CTCF	chr9:13278820-13278970	HCPEpiC	choroid plexus:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
35	CTCF	chr9:13278820-13278970	HRE	kidney:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
36	CTCF	chr9:13278780-13278930	HMEC	breast:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
37	CTCF	chr9:13278700-13278850	HVMF	connective:	n/a	n/a
38	CTCF	chr9:13278800-13278950	HMF	breast:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
39	CTCF	chr9:13278780-13278930	HAc	cerebellar:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
40	CTCF	chr9:13278800-13278950	AoAF	blood vessel:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
41	CTCF	chr9:13278800-13278950	HRPEpiC	eye:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
42	CTCF	chr9:13278829-13278832	K562	blood:	n/a	n/a
43	CTCF	chr9:13278740-13278890	WI-38	lung:	n/a	n/a
44	CTCF	chr9:13278800-13278950	AG09309	skin:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
45	CTCF	chr9:13278854-13278908	Kidney_OC	kidney:	n/a	chr9:13278884-13278897
46	CTCF	chr9:13278740-13278890	HepG2	liver:	n/a	n/a
47	CTCF	chr9:13278800-13278950	RPTEC	kidney:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
48	CTCF	chr9:13278840-13278990	HepG2	liver:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
49	CTCF	chr9:13278780-13278930	HPF	lung:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
50	CTCF	chr9:13278800-13278950	AG04449	skin:	n/a	chr9:13278914-13278927 chr9:13278884-13278897

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:13278512-13278562	AG04449	skin:	fetal
2	chr9:13278512-13278562	SK-N-SH_RA	brain:	n/a
3	chr9:13278512-13278562	AG04449	skin:	fetal
4	chr9:13278512-13278562	SK-N-SH_RA	brain:	n/a
5	chr9:13279482-13279532	SKMC	muscle:	n/a
6	chr9:13280025-13280075	HPAEpiC	pulmonary alveolar:	n/a
7	chr9:13278626-13278676	NHBE	bronchial:	n/a
8	chr9:13278626-13278676	AG09319	gingival:	n/a
9	chr9:13278512-13278562	HPAEpiC	pulmonary alveolar:	n/a
10	chr9:13280025-13280075	AoSMC	blood vessel:	n/a
11	chr9:13278626-13278676	SK-N-SH_RA	brain:	n/a
12	chr9:13278977-13279027	HCPEpiC	choroid plexus:	n/a
13	chr9:13278977-13279027	AG09309	skin:	n/a
14	chr9:13278626-13278676	A549	lung:	n/a
15	chr9:13278512-13278562	T-47D	breast:	n/a
16	chr9:13278626-13278676	GM12892	blood:	n/a
17	chr9:13279482-13279532	SK-N-SH_RA	brain:	n/a
18	chr9:13278626-13278676	CMK	blood:	n/a
19	chr9:13278977-13279027	HIPEpiC	eye:	n/a
20	chr9:13278626-13278676	Hela-S3	cervix:	n/a
21	chr9:13280025-13280075	ECC-1	luminal epithelium:	n/a
22	chr9:13280025-13280075	HRE	kidney:	n/a
23	chr9:13278977-13279027	HL-60	blood:	n/a
24	chr9:13278626-13278676	HEK293	kidney:	embryo
25	chr9:13278977-13279027	Caco-2	colon:	n/a
26	chr9:13278977-13279027	Hela-S3	cervix:	n/a
27	chr9:13278512-13278562	SAEC	small airway:	n/a
28	chr9:13278626-13278676	T-47D	breast:	n/a
29	chr9:13280025-13280075	GM19239	blood:	n/a
30	chr9:13278512-13278562	GM12891	blood:	n/a
31	chr9:13280025-13280075	HCF	heart:	n/a
32	chr9:13278977-13279027	MCF10A-Er-Src	breast:	n/a
33	chr9:13279482-13279532	GM12878	blood:	n/a
34	chr9:13278626-13278676	PFSK-1	brain:	n/a
35	chr9:13278512-13278562	HMEC	breast:	n/a
36	chr9:13278626-13278676	AG04449	skin:	fetal
37	chr9:13278512-13278562	K562	blood:	n/a
38	chr9:13279482-13279532	U87	brain:	n/a
39	chr9:13278512-13278562	GM19239	blood:	n/a
40	chr9:13280025-13280075	NH-A	brain:	n/a
41	chr9:13278512-13278562	BE2_C	brain:	n/a
42	chr9:13278977-13279027	HMEC	breast:	n/a
43	chr9:13278626-13278676	U87	brain:	n/a
44	chr9:13278977-13279027	HCF	heart:	n/a
45	chr9:13278977-13279027	HNPCEpiC	eye:	n/a
46	chr9:13278512-13278562	AoSMC	blood vessel:	n/a
47	chr9:13278512-13278562	ProgFib	skin:	n/a
48	chr9:13278977-13279027	CMK	blood:	n/a
49	chr9:13278512-13278562	PrEC	prostate:	n/a
50	chr9:13278977-13279027	HEK293	kidney:	embryo

No.	Distal block	Cell Line	Cell type
1	chr9:13266586..13268806-chr9:13275605..13278055,2	MCF-7	breast:
2	chr9:13275549..13278427-chr9:13279998..13281670,2	K562	blood:
3	chr17:55977919..55980808-chr9:13278471..13279995,2	MCF-7	breast:
4	chr9:13278089..13282078-chr9:14313109..14316114,3	MCF-7	breast:
5	chr9:13033734..13035793-chr9:13280439..13283221,2	K562	blood:
6	chr9:13275549..13278427-chr9:13279998..13281670,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NFIB-1	chr9:13279029-13279186	ENSG00000234740.1

Variant related genes	Relation type
MPDZ	TF binding region
ENSG00000234740	TF binding region
MPDZ	CpG island
ENSG00000234740	CpG island
ENSG00000180891	chromatin interactions
ENSG00000147862	chromatin interactions

Extended variants
information (count: 121 )
Associated
traits (count: 96 )

Variant overlapped rSNPs/rCNVs (count:121 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs189857054	chr9:13278065-13278066	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs10960997	chr9:13278073-13278074	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs183169882	chr9:13278097-13278098	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs563975441	chr9:13278138-13278139	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs560636545	chr9:13278167-13278168	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs187951963	chr9:13278185-13278186	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs147433544	chr9:13278208-13278209	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs112283447	chr9:13278248-13278249	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs137856989	chr9:13278253-13278254	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs13289853	chr9:13278256-13278257	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs549140297	chr9:13278273-13278274	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs566037445	chr9:13278316-13278317	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs570914817	chr9:13278328-13278329	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs535045266	chr9:13278389-13278390	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs13290208	chr9:13278402-13278403	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs556994786	chr9:13278403-13278404	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs573905825	chr9:13278417-13278418	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs536141031	chr9:13278426-13278427	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs377081971	chr9:13278433-13278434	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs573069903	chr9:13278447-13278448	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs143440223	chr9:13278475-13278476	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs147157732	chr9:13278550-13278551	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs571577388	chr9:13278585-13278586	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs563515228	chr9:13278596-13278597	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs369561459	chr9:13278652-13278653	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs549402670	chr9:13278656-13278657	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs11790299	chr9:13278657-13278658	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs528616339	chr9:13278659-13278660	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs145811978	chr9:13278712-13278713	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs551072150	chr9:13278724-13278725	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs557506005	chr9:13278751-13278752	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs376073210	chr9:13278764-13278765	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs77636009	chr9:13278795-13278796	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs550584972	chr9:13278800-13278801	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs142128806	chr9:13278831-13278832	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs111653137	chr9:13278840-13278841	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs552943630	chr9:13278859-13278860	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs573082353	chr9:13278897-13278898	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs10960998	chr9:13278899-13278900	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs558307336	chr9:13278909-13278910	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs11788311	chr9:13278943-13278944	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs192890760	chr9:13278960-13278961	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs555843698	chr9:13278989-13278990	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs150666957	chr9:13279035-13279036	Active TSS Weak transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
45	rs573948630	chr9:13279102-13279103	Active TSS Weak transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
46	rs543309950	chr9:13279103-13279104	Active TSS Weak transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
47	rs10960999	chr9:13279112-13279113	Active TSS Weak transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs116440919	chr9:13279114-13279115	Active TSS Weak transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
49	rs185310802	chr9:13279127-13279128	Active TSS Weak transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
50	rs565122337	chr9:13279162-13279163	Active TSS Weak transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:96)

Disease	PMID	Source
Disorders of sex development	21048976	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
abnormal development	18461090	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma	19074898	CNVD
Malignant melanoma	19074898	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Developmental delay	21147756	CNVD
small cell lung cancer	21764851	CNVD
Glioblastoma multiforme	22286061	CNVD
Glioma	17123091	CNVD
Lung cancer	16773561	CNVD
Colorectal cancer	16272173	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Gastric cancer	16891809	CNVD
Mental retardation	17847001	CNVD
Cutaneous squamous cell carcinomas	17420988	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	22183965	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD

Chromatin state (count:332 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:13226800-13278000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr9:13240000-13278000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr9:13265600-13278200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr9:13268800-13278000	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr9:13268800-13278000	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr9:13270000-13278200	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr9:13272600-13278000	Weak transcription	Right Ventricle	heart
8	chr9:13273200-13278200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr9:13274800-13278000	Enhancers	Fetal Heart	heart
10	chr9:13275200-13278000	Weak transcription	NHDF-Ad	bronchial
11	chr9:13275400-13278000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr9:13275400-13278000	Weak transcription	Brain Germinal Matrix	brain
13	chr9:13275400-13278000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr9:13275400-13278200	Weak transcription	Liver	Liver
15	chr9:13275600-13278000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
16	chr9:13275600-13278000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr9:13275600-13278000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr9:13275600-13278000	Weak transcription	Muscle Satellite Cultured Cells	--
19	chr9:13275600-13278000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr9:13275600-13278000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr9:13275600-13278000	Weak transcription	Brain Angular Gyrus	brain
22	chr9:13275600-13278000	Weak transcription	Right Atrium	heart
23	chr9:13275600-13278000	Weak transcription	Skeletal Muscle Female	skeletal muscle
24	chr9:13275600-13278000	Weak transcription	HMEC	breast
25	chr9:13275600-13278000	Weak transcription	HSMM	muscle
26	chr9:13275600-13278200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr9:13275600-13278200	Weak transcription	Left Ventricle	heart
28	chr9:13275600-13278200	Weak transcription	Psoas Muscle	Psoas
29	chr9:13275600-13278200	Weak transcription	NHEK	skin
30	chr9:13275800-13278000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
31	chr9:13275800-13278000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
32	chr9:13275800-13278000	Weak transcription	Brain Hippocampus Middle	brain
33	chr9:13276000-13278000	Weak transcription	K562	blood
34	chr9:13276000-13278200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
35	chr9:13276200-13278000	Weak transcription	Brain Cingulate Gyrus	brain
36	chr9:13276600-13278000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
37	chr9:13276600-13278000	Enhancers	HepG2	liver
38	chr9:13277000-13278000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
39	chr9:13277000-13278000	Enhancers	HUES48 Cell Line	embryonic stem cell
40	chr9:13277000-13278000	Enhancers	Adipose Nuclei	Adipose
41	chr9:13277200-13278000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
42	chr9:13277200-13278000	Enhancers	Cortex derived primary cultured neurospheres	brain
43	chr9:13277600-13278000	Flanking Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
44	chr9:13277600-13278000	Enhancers	Fetal Muscle Leg	muscle
45	chr9:13277600-13278000	Enhancers	Fetal Stomach	stomach
46	chr9:13277600-13278000	Enhancers	Ovary	ovary
47	chr9:13277600-13278000	Enhancers	Rectal Smooth Muscle	rectum
48	chr9:13277600-13278200	Enhancers	Placenta	Placenta
49	chr9:13277600-13278200	Enhancers	Lung	lung
50	chr9:13277600-13278400	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived

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