No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs35036752 |
chr12:50897739-50897740 |
Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs566424299 |
chr12:50897760-50897761 |
Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs532052047 |
chr12:50897773-50897774 |
Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs567853669 |
chr12:50897777-50897778 |
Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs563656066 |
chr12:50897788-50897789 |
Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs531054733 |
chr12:50897818-50897819 |
Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs561314363 |
chr12:50897882-50897883 |
Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs373157391 |
chr12:50897898-50897899 |
Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs28479152 |
chr12:50897926-50897927 |
Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
10 |
rs11302728 |
chr12:50897963-50897964 |
Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs398019515 |
chr12:50897978-50897979 |
Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs530063585 |
chr12:50897999-50898000 |
Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs568187252 |
chr12:50898006-50898007 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs540689004 |
chr12:50898014-50898015 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs536707928 |
chr12:50898028-50898029 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs553230069 |
chr12:50898029-50898030 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs113457700 |
chr12:50898042-50898043 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs538672898 |
chr12:50898043-50898044 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs558808577 |
chr12:50898045-50898046 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs370219247 |
chr12:50898089-50898090 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs575499247 |
chr12:50898101-50898102 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs11169465 |
chr12:50898110-50898111 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs74348131 |
chr12:50898126-50898127 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs574945251 |
chr12:50898181-50898182 |
Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs142204046 |
chr12:50898190-50898191 |
Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs564167303 |
chr12:50898193-50898194 |
Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs192489371 |
chr12:50898211-50898212 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs532111570 |
chr12:50898224-50898225 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs183782675 |
chr12:50898229-50898230 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs562485915 |
chr12:50898255-50898256 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs531609719 |
chr12:50898280-50898281 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs11169466 |
chr12:50898296-50898297 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
33 |
rs568234030 |
chr12:50898361-50898362 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs377653745 |
chr12:50898420-50898421 |
Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs147855330 |
chr12:50898433-50898434 |
Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs79564340 |
chr12:50898435-50898436 |
Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs566884841 |
chr12:50898448-50898449 |
Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs377723986 |
chr12:50898483-50898484 |
Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs546581591 |
chr12:50898520-50898521 |
Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs558501302 |
chr12:50898529-50898530 |
Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs79684541 |
chr12:50898568-50898569 |
Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs538107603 |
chr12:50898722-50898723 |
Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs61927768 |
chr12:50898728-50898729 |
Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
mRNA abundance
|
44 |
rs370159733 |
chr12:50898732-50898733 |
Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs7975780 |
chr12:50898754-50898755 |
Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs368648487 |
chr12:50898759-50898760 |
Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs540498691 |
chr12:50898769-50898770 |
Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs560180152 |
chr12:50898774-50898775 |
Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs372915240 |
chr12:50898778-50898779 |
Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs576980972 |
chr12:50898783-50898784 |
Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|