Variant report

Variant	esv3405883
Chromosome Location	chr9:13278702-13280900
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr9:13279363-13279954	H1-hESC	embryonic stem cell:	n/a	n/a
2	BHLHE40	chr9:13279384-13279648	K562	blood:	n/a	n/a
3	CCNT2	chr9:13279271-13279892	K562	blood:	n/a	chr9:13279622-13279631
4	CCNT2	chr9:13278210-13278873	K562	blood:	n/a	n/a
5	CEBPD	chr9:13279233-13279576	HepG2	liver:	n/a	n/a
6	CHD2	chr9:13279406-13279700	HepG2	liver:	n/a	n/a
7	CHD2	chr9:13278750-13278753	HepG2	liver:	n/a	n/a
8	CHD2	chr9:13279452-13279788	K562	blood:	n/a	n/a
9	CHD2	chr9:13278431-13278782	H1-hESC	embryonic stem cell:	n/a	chr9:13278434-13278444
10	CHD2	chr9:13279455-13279700	Hela-S3	cervix:	n/a	n/a
11	CHD2	chr9:13279436-13279848	H1-hESC	embryonic stem cell:	n/a	n/a
12	CREB1	chr9:13279252-13279948	HepG2	liver:	n/a	n/a
13	CREB1	chr9:13278371-13278850	A549	lung:	n/a	n/a
14	CREB1	chr9:13279395-13279883	H1-hESC	embryonic stem cell:	n/a	n/a
15	CREB1	chr9:13279298-13279841	A549	lung:	n/a	n/a
16	CTBP2	chr9:13278130-13279032	H1-hESC	embryonic stem cell:	n/a	n/a
17	CTCF	chr9:13278800-13278950	AoAF	blood vessel:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
18	CTCF	chr9:13279537-13279761	SK-N-SH_RA	brain:	n/a	n/a
19	CTCF	chr9:13278760-13278910	HEEpiC	esophagus:	n/a	chr9:13278884-13278897
20	CTCF	chr9:13278840-13278990	HA-sp	spinal cord:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
21	CTCF	chr9:13278820-13278970	HA-sp	spinal cord:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
22	CTCF	chr9:13279650-13279738	Kidney_OC	kidney:	n/a	n/a
23	CTCF	chr9:13278800-13278950	HPAF	blood vessel:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
24	CTCF	chr9:13279320-13279470	HUVEC	blood vessel:	n/a	chr9:13279426-13279442
25	CTCF	chr9:13278740-13278890	WI-38	lung:	n/a	n/a
26	CTCF	chr9:13278804-13278914	Gliobla	brain:	n/a	chr9:13278884-13278897
27	CTCF	chr9:13278780-13278930	NHDF-neo	bronchial:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
28	CTCF	chr9:13279420-13279570	HBMEC	blood vessel:	n/a	chr9:13279426-13279442
29	CTCF	chr9:13278800-13278950	AG04449	skin:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
30	CTCF	chr9:13278820-13278970	HUVEC	blood vessel:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
31	CTCF	chr9:13278800-13278950	HRPEpiC	eye:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
32	CTCF	chr9:13278836-13278953	H1-hESC	embryonic stem cell:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
33	CTCF	chr9:13278820-13278970	AG10803	skin:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
34	CTCF	chr9:13278824-13278949	MCF-7	breast:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
35	CTCF	chr9:13278780-13278930	AG04450	lung:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
36	CTCF	chr9:13278860-13279010	HFF	foreskin:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
37	CTCF	chr9:13278800-13278950	NHLF	lung:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
38	CTCF	chr9:13278800-13278950	BJ	skin:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
39	CTCF	chr9:13278820-13278970	HCPEpiC	choroid plexus:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
40	CTCF	chr9:13278780-13278930	HEK293	kidney:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
41	CTCF	chr9:13278840-13278990	AG09309	skin:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
42	CTCF	chr9:13278840-13278990	NHDF-neo	bronchial:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
43	CTCF	chr9:13279440-13279590	HMEC	breast:	n/a	n/a
44	CTCF	chr9:13278820-13278970	HVMF	connective:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
45	CTCF	chr9:13278780-13278930	AoAF	blood vessel:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
46	CTCF	chr9:13278765-13278961	A549	lung:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
47	CTCF	chr9:13278700-13278850	HVMF	connective:	n/a	n/a
48	CTCF	chr9:13278833-13278923	K562	blood:	n/a	chr9:13278884-13278897
49	CTCF	chr9:13278820-13278970	AG04449	skin:	n/a	chr9:13278914-13278927 chr9:13278884-13278897
50	CTCF	chr9:13278813-13278920	MCF-7	breast:	n/a	chr9:13278884-13278897

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:13279482-13279532	AoSMC	blood vessel:	n/a
2	chr9:13279482-13279532	AG10803	skin:	n/a
3	chr9:13280025-13280075	GM12878	blood:	n/a
4	chr9:13280025-13280075	NHBE	bronchial:	n/a
5	chr9:13280025-13280075	RPTEC	kidney:	n/a
6	chr9:13280025-13280075	HCM	heart:	n/a
7	chr9:13278977-13279027	HCM	heart:	n/a
8	chr9:13279482-13279532	SK-N-SH	brain:	n/a
9	chr9:13280025-13280075	BE2_C	brain:	n/a
10	chr9:13279482-13279532	IMR90	lung:	fetal
11	chr9:13280025-13280075	U87	brain:	n/a
12	chr9:13279482-13279532	HMEC	breast:	n/a
13	chr9:13278977-13279027	NH-A	brain:	n/a
14	chr9:13279482-13279532	GM12891	blood:	n/a
15	chr9:13279482-13279532	K562	blood:	n/a
16	chr9:13280025-13280075	Hepatocyte	liver:	n/a
17	chr9:13279482-13279532	ECC-1	luminal epithelium:	n/a
18	chr9:13279482-13279532	BJ	skin:	n/a
19	chr9:13280025-13280075	K562	blood:	n/a
20	chr9:13280025-13280075	PANC-1	pancreas:	n/a
21	chr9:13278977-13279027	ovcar-3	ovarian:	n/a
22	chr9:13278977-13279027	LNCaP	prostate:	n/a
23	chr9:13280025-13280075	NB4	blood:	n/a
24	chr9:13278977-13279027	A549	lung:	n/a
25	chr9:13278977-13279027	AG04449	skin:	fetal
26	chr9:13279482-13279532	NT2-D1	testis:	n/a
27	chr9:13278977-13279027	GM12891	blood:	n/a
28	chr9:13278977-13279027	AG10803	skin:	n/a
29	chr9:13280025-13280075	NH-A	brain:	n/a
30	chr9:13279482-13279532	A549	lung:	n/a
31	chr9:13279482-13279532	LNCaP	prostate:	n/a
32	chr9:13280025-13280075	LNCaP	prostate:	n/a
33	chr9:13278977-13279027	NHDF-neo	bronchial:	n/a
34	chr9:13278977-13279027	AG09319	gingival:	n/a
35	chr9:13278977-13279027	HPAEpiC	pulmonary alveolar:	n/a
36	chr9:13279482-13279532	HPAEpiC	pulmonary alveolar:	n/a
37	chr9:13280025-13280075	AG04450	lung:	fetal
38	chr9:13279482-13279532	AG09319	gingival:	n/a
39	chr9:13280025-13280075	HRCEpiC	kidney:	n/a
40	chr9:13278977-13279027	AG09309	skin:	n/a
41	chr9:13279482-13279532	H1-hESC	embryonic stem cell:	embryo
42	chr9:13278977-13279027	SK-N-SH_RA	brain:	n/a
43	chr9:13279482-13279532	Hela-S3	cervix:	n/a
44	chr9:13280025-13280075	GM19239	blood:	n/a
45	chr9:13279482-13279532	ovcar-3	ovarian:	n/a
46	chr9:13279482-13279532	GM06990	blood:	n/a
47	chr9:13278977-13279027	Jurkat	blood:	n/a
48	chr9:13278977-13279027	Hela-S3	cervix:	n/a
49	chr9:13278977-13279027	U87	brain:	n/a
50	chr9:13278977-13279027	PFSK-1	brain:	n/a

No.	Distal block	Cell Line	Cell type
1	chr9:13275549..13278427-chr9:13279998..13281670,2	K562	blood:
2	chr9:13278089..13282078-chr9:14313109..14316114,3	MCF-7	breast:
3	chr9:13033734..13035793-chr9:13280439..13283221,2	K562	blood:
4	chr17:55977919..55980808-chr9:13278471..13279995,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NFIB-1	chr9:13279029-13279186	ENSG00000234740.1

Variant related genes	Relation type
MPDZ	TF binding region
ENSG00000234740	TF binding region
MPDZ	CpG island
ENSG00000234740	CpG island
ENSG00000180891	chromatin interactions
ENSG00000147862	chromatin interactions

Extended variants
information (count: 93 )
Associated
traits (count: 96 )

Variant overlapped rSNPs/rCNVs (count:93 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs145811978	chr9:13278712-13278713	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs551072150	chr9:13278724-13278725	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs557506005	chr9:13278751-13278752	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs376073210	chr9:13278764-13278765	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs77636009	chr9:13278795-13278796	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs550584972	chr9:13278800-13278801	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs142128806	chr9:13278831-13278832	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs111653137	chr9:13278840-13278841	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs552943630	chr9:13278859-13278860	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs573082353	chr9:13278897-13278898	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs10960998	chr9:13278899-13278900	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs558307336	chr9:13278909-13278910	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs11788311	chr9:13278943-13278944	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs192890760	chr9:13278960-13278961	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs555843698	chr9:13278989-13278990	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs150666957	chr9:13279035-13279036	Active TSS Weak transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
17	rs573948630	chr9:13279102-13279103	Active TSS Weak transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
18	rs543309950	chr9:13279103-13279104	Active TSS Weak transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
19	rs10960999	chr9:13279112-13279113	Active TSS Weak transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs116440919	chr9:13279114-13279115	Active TSS Weak transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
21	rs185310802	chr9:13279127-13279128	Active TSS Weak transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
22	rs565122337	chr9:13279162-13279163	Active TSS Weak transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
23	rs530559964	chr9:13279194-13279195	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs550779502	chr9:13279262-13279263	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs10961000	chr9:13279298-13279299	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs10961001	chr9:13279299-13279300	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs200267439	chr9:13279303-13279304	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs10961002	chr9:13279311-13279312	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs111959918	chr9:13279318-13279319	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs111307259	chr9:13279319-13279320	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs529616163	chr9:13279374-13279375	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs546887423	chr9:13279392-13279393	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs566746589	chr9:13279479-13279480	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs9696523	chr9:13279498-13279499	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs558822413	chr9:13279503-13279504	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
36	rs569063878	chr9:13279525-13279526	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
37	rs201292907	chr9:13279536-13279537	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
38	rs77520402	chr9:13279538-13279539	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
39	rs537601959	chr9:13279583-13279584	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
40	rs376306848	chr9:13279600-13279601	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
41	rs139926461	chr9:13279646-13279647	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
42	rs370697668	chr9:13279722-13279723	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
43	rs143862875	chr9:13279752-13279753	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
44	rs573990808	chr9:13279776-13279777	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
45	rs542622424	chr9:13279854-13279855	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
46	rs575166668	chr9:13279858-13279859	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
47	rs552925052	chr9:13279863-13279864	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
48	rs560435507	chr9:13279882-13279883	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
49	rs71331537	chr9:13279892-13279893	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
50	rs78027547	chr9:13279925-13279926	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:96)

Disease	PMID	Source
Disorders of sex development	21048976	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
abnormal development	18461090	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma	19074898	CNVD
Malignant melanoma	19074898	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Developmental delay	21147756	CNVD
small cell lung cancer	21764851	CNVD
Glioblastoma multiforme	22286061	CNVD
Glioma	17123091	CNVD
Lung cancer	16773561	CNVD
Colorectal cancer	16272173	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Gastric cancer	16891809	CNVD
Mental retardation	17847001	CNVD
Cutaneous squamous cell carcinomas	17420988	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	22183965	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD

Chromatin state (count:215 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:13277600-13279800	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr9:13277800-13278800	Flanking Active TSS	NH-A	brain
3	chr9:13277800-13280000	Active TSS	Brain Anterior Caudate	brain
4	chr9:13277800-13280000	Active TSS	Colon Smooth Muscle	Colon
5	chr9:13277800-13280000	Active TSS	Fetal Brain Female	brain
6	chr9:13277800-13280000	Active TSS	A549	lung
7	chr9:13277800-13280000	Active TSS	Osteobl	bone
8	chr9:13277800-13280200	Active TSS	ES-I3 Cell Line	embryonic stem cell
9	chr9:13277800-13280200	Active TSS	iPS-20b Cell Line	embryonic stem cell
10	chr9:13277800-13280200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr9:13277800-13280200	Active TSS	Aorta	Aorta
12	chr9:13277800-13280200	Active TSS	Duodenum Smooth Muscle	Duodenum
13	chr9:13277800-13280200	Active TSS	NHLF	lung
14	chr9:13277800-13280400	Active TSS	iPS-18 Cell Line	embryonic stem cell
15	chr9:13277800-13280400	Active TSS	Brain Inferior Temporal Lobe	brain
16	chr9:13278000-13278800	Flanking Active TSS	Adipose Nuclei	Adipose
17	chr9:13278000-13279000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr9:13278000-13279800	Active TSS	Primary hematopoietic stem cells	blood
19	chr9:13278000-13280000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr9:13278000-13280000	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr9:13278000-13280000	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr9:13278000-13280000	Active TSS	Brain Angular Gyrus	brain
23	chr9:13278000-13280000	Active TSS	Brain Germinal Matrix	brain
24	chr9:13278000-13280000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
25	chr9:13278000-13280000	Bivalent/Poised TSS	Fetal Intestine Large	intestine
26	chr9:13278000-13280000	Active TSS	Fetal Kidney	kidney
27	chr9:13278000-13280000	Active TSS	HSMM	muscle
28	chr9:13278000-13280000	Active TSS	K562	blood
29	chr9:13278000-13280000	Active TSS	NHDF-Ad	bronchial
30	chr9:13278000-13280200	Active TSS	H1 Cell Line	embryonic stem cell
31	chr9:13278000-13280200	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
32	chr9:13278000-13280200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
33	chr9:13278000-13280200	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
34	chr9:13278000-13280200	Active TSS	Rectal Mucosa Donor 29	rectum
35	chr9:13278000-13280200	Active TSS	Right Atrium	heart
36	chr9:13278000-13280200	Active TSS	Right Ventricle	heart
37	chr9:13278000-13280200	Active TSS	HSMMtube	muscle
38	chr9:13278000-13280400	Active TSS	Brain Cingulate Gyrus	brain
39	chr9:13278000-13280400	Active TSS	Pancreatic Islets	Pancreatic Islet
40	chr9:13278200-13278800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
41	chr9:13278200-13278800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
42	chr9:13278200-13278800	Active TSS	Fetal Heart	heart
43	chr9:13278200-13278800	Flanking Active TSS	Pancreas	Pancrea
44	chr9:13278200-13278800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
45	chr9:13278200-13278800	Flanking Active TSS	HMEC	breast
46	chr9:13278200-13279000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
47	chr9:13278200-13279000	Flanking Active TSS	Placenta	Placenta
48	chr9:13278200-13279800	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
49	chr9:13278200-13279800	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr9:13278200-13279800	Active TSS	Esophagus	oesophagus

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