Variant report

Variant	esv3412678
Chromosome Location	chr6:64282218-64284766
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:64283508-64284006	K562	blood:	n/a	n/a
2	ARID3A	chr6:64284207-64284625	K562	blood:	n/a	chr6:64284580-64284596
3	ARID3A	chr6:64283365-64284790	HepG2	liver:	n/a	chr6:64284580-64284596
4	ARID3A	chr6:64281418-64282668	HepG2	liver:	n/a	n/a
5	ATF1	chr6:64281800-64282557	K562	blood:	n/a	n/a
6	ATF2	chr6:64281580-64282268	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr6:64281716-64282574	GM12878	blood:	n/a	n/a
8	ATF2	chr6:64283263-64283688	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr6:64283107-64283988	GM12878	blood:	n/a	n/a
10	ATF2	chr6:64281735-64282780	GM12878	blood:	n/a	n/a
11	ATF3	chr6:64283268-64283513	K562	blood:	n/a	n/a
12	ATF3	chr6:64281559-64282273	A549	lung:	n/a	chr6:64282180-64282189 chr6:64282244-64282264
13	ATF3	chr6:64281498-64282379	A549	lung:	n/a	chr6:64282267-64282276 chr6:64282180-64282189 chr6:64282244-64282264
14	BACH1	chr6:64282000-64282337	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr6:64281865-64282332	K562	blood:	n/a	n/a
16	BACH1	chr6:64283138-64284076	H1-hESC	embryonic stem cell:	n/a	n/a
17	BATF	chr6:64281992-64282265	GM12878	blood:	n/a	n/a
18	BCL3	chr6:64281388-64282571	A549	lung:	n/a	chr6:64282276-64282285 chr6:64282179-64282188 chr6:64282240-64282253 chr6:64282237-64282250 chr6:64282236-64282249 chr6:64282239-64282252
19	BCL3	chr6:64283204-64283701	GM12878	blood:	n/a	n/a
20	BCL3	chr6:64281279-64282487	A549	lung:	n/a	chr6:64282276-64282285 chr6:64282179-64282188 chr6:64282240-64282253 chr6:64282237-64282250 chr6:64282236-64282249 chr6:64282239-64282252
21	BCL3	chr6:64282043-64282637	GM12878	blood:	n/a	chr6:64282276-64282285 chr6:64282179-64282188 chr6:64282240-64282253 chr6:64282237-64282250 chr6:64282236-64282249 chr6:64282239-64282252
22	BCL3	chr6:64283417-64284718	A549	lung:	n/a	chr6:64284626-64284635 chr6:64284625-64284634
23	BCLAF1	chr6:64281803-64282739	GM12878	blood:	n/a	chr6:64282276-64282285 chr6:64282179-64282188 chr6:64282240-64282253 chr6:64282237-64282250 chr6:64282236-64282249 chr6:64282239-64282252
24	BCLAF1	chr6:64284025-64284655	GM12878	blood:	n/a	chr6:64284626-64284635 chr6:64284625-64284634
25	BCLAF1	chr6:64284161-64284604	GM12878	blood:	n/a	n/a
26	BCLAF1	chr6:64282778-64283868	GM12878	blood:	n/a	chr6:64282920-64282933 chr6:64282900-64282909
27	BCLAF1	chr6:64281771-64283862	GM12878	blood:	n/a	chr6:64282276-64282285 chr6:64282920-64282933 chr6:64282179-64282188 chr6:64282240-64282253 chr6:64282237-64282250 chr6:64282236-64282249 chr6:64282900-64282909 chr6:64282239-64282252
28	BHLHE40	chr6:64282948-64284564	K562	blood:	n/a	chr6:64282948-64282964
29	BHLHE40	chr6:64281622-64282613	GM12878	blood:	n/a	chr6:64282293-64282309 chr6:64282236-64282252 chr6:64282279-64282295 chr6:64282237-64282253 chr6:64282231-64282247 chr6:64282239-64282255 chr6:64282410-64282426
30	BHLHE40	chr6:64283097-64283834	HepG2	liver:	n/a	n/a
31	BHLHE40	chr6:64283005-64283951	GM12878	blood:	n/a	n/a
32	BHLHE40	chr6:64281821-64282738	K562	blood:	n/a	chr6:64282293-64282309 chr6:64282236-64282252 chr6:64282279-64282295 chr6:64282237-64282253 chr6:64282231-64282247 chr6:64282239-64282255 chr6:64282410-64282426
33	BHLHE40	chr6:64281469-64282682	HepG2	liver:	n/a	chr6:64282293-64282309 chr6:64282236-64282252 chr6:64282279-64282295 chr6:64282237-64282253 chr6:64282231-64282247 chr6:64282239-64282255 chr6:64282410-64282426
34	BRCA1	chr6:64283247-64283507	HepG2	liver:	n/a	n/a
35	BRCA1	chr6:64282969-64283424	H1-hESC	embryonic stem cell:	n/a	n/a
36	BRCA1	chr6:64283985-64284444	H1-hESC	embryonic stem cell:	n/a	n/a
37	BRCA1	chr6:64283159-64283551	GM12878	blood:	n/a	n/a
38	BRCA1	chr6:64283342-64285473	Hela-S3	cervix:	n/a	n/a
39	BRCA1	chr6:64281753-64282637	HepG2	liver:	n/a	n/a
40	BRCA1	chr6:64281767-64282326	GM12878	blood:	n/a	n/a
41	BRCA1	chr6:64280966-64282562	Hela-S3	cervix:	n/a	n/a
42	CBX3	chr6:64284153-64284586	K562	blood:	n/a	n/a
43	CBX3	chr6:64281606-64282567	K562	blood:	n/a	n/a
44	CBX3	chr6:64281443-64282640	HCT-116	colon:	n/a	n/a
45	CCNT2	chr6:64284183-64284476	K562	blood:	n/a	n/a
46	CCNT2	chr6:64281935-64283889	K562	blood:	n/a	n/a
47	CEBPB	chr6:64281306-64282583	IMR90	lung:	n/a	n/a
48	CEBPB	chr6:64281085-64282595	Hela-S3	cervix:	n/a	n/a
49	CEBPB	chr6:64281437-64282538	ECC-1	luminal epithelium:	n/a	n/a
50	CEBPB	chr6:64281440-64282691	HepG2	liver:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:64283529-64283579	BE2_C	brain:	n/a
2	chr6:64283656-64283706	HAEpiC	amniotic membrane:	n/a
3	chr6:64283916-64283966	HIPEpiC	eye:	n/a
4	chr6:64283656-64283706	NT2-D1	testis:	n/a
5	chr6:64283916-64283966	RPTEC	kidney:	n/a
6	chr6:64283529-64283579	A549	lung:	n/a
7	chr6:64283529-64283579	PrEC	prostate:	n/a
8	chr6:64283916-64283966	NT2-D1	testis:	n/a
9	chr6:64283656-64283706	HUVEC	blood vessel:	n/a
10	chr6:64283916-64283966	HMEC	breast:	n/a
11	chr6:64282634-64282684	PrEC	prostate:	n/a
12	chr6:64283529-64283579	GM19239	blood:	n/a
13	chr6:64283656-64283706	K562	blood:	n/a
14	chr6:64283916-64283966	MCF10A-Er-Src	breast:	n/a
15	chr6:64283916-64283966	PANC-1	pancreas:	n/a
16	chr6:64283529-64283579	HPAEpiC	pulmonary alveolar:	n/a
17	chr6:64282634-64282684	SAEC	small airway:	n/a
18	chr6:64283916-64283966	AG10803	skin:	n/a
19	chr6:64283916-64283966	U87	brain:	n/a
20	chr6:64283529-64283579	ECC-1	luminal epithelium:	n/a
21	chr6:64282634-64282684	Hela-S3	cervix:	n/a
22	chr6:64283916-64283966	SAEC	small airway:	n/a
23	chr6:64283656-64283706	ProgFib	skin:	n/a
24	chr6:64282634-64282684	HCF	heart:	n/a
25	chr6:64283656-64283706	HEEpiC	esophagus:	n/a
26	chr6:64283916-64283966	GM12891	blood:	n/a
27	chr6:64282634-64282684	CMK	blood:	n/a
28	chr6:64282634-64282684	GM12892	blood:	n/a
29	chr6:64283529-64283579	Hepatocyte	liver:	n/a
30	chr6:64283916-64283966	PrEC	prostate:	n/a
31	chr6:64283102-64283152	HRPEpiC	eye:	n/a
32	chr6:64283529-64283579	AoSMC	blood vessel:	n/a
33	chr6:64283916-64283966	HRCEpiC	kidney:	n/a
34	chr6:64283656-64283706	LNCaP	prostate:	n/a
35	chr6:64283916-64283966	HNPCEpiC	eye:	n/a
36	chr6:64283916-64283966	HepG2	liver:	n/a
37	chr6:64283529-64283579	K562	blood:	n/a
38	chr6:64283102-64283152	BJ	skin:	n/a
39	chr6:64282634-64282684	ovcar-3	ovarian:	n/a
40	chr6:64283529-64283579	U87	brain:	n/a
41	chr6:64282634-64282684	BJ	skin:	n/a
42	chr6:64282634-64282684	ProgFib	skin:	n/a
43	chr6:64283656-64283706	H1-hESC	embryonic stem cell:	embryo
44	chr6:64282634-64282684	HEEpiC	esophagus:	n/a
45	chr6:64283529-64283579	Hela-S3	cervix:	n/a
46	chr6:64282634-64282684	AG09309	skin:	n/a
47	chr6:64282634-64282684	PANC-1	pancreas:	n/a
48	chr6:64283656-64283706	RPTEC	kidney:	n/a
49	chr6:64283916-64283966	SK-N-SH_RA	brain:	n/a
50	chr6:64283916-64283966	H1-hESC	embryonic stem cell:	embryo

No.	Distal block	Cell Line	Cell type
1	chr6:64282300..64285121-chr6:64344482..64347606,3	MCF-7	breast:
2	chr6:64062639..64063365-chr6:64283555..64284772,4	MCF-7	breast:
3	chr6:64028950..64031387-chr6:64282272..64283955,2	MCF-7	breast:
4	chr6:64281185..64283276-chr6:64354307..64357055,2	K562	blood:
5	chr6:64283165..64284700-chr6:64513286..64516142,2	MCF-7	breast:
6	chr6:64282139..64282927-chrX:21857442..21858101,2	Hela-S3	cervix:
7	chr6:64283629..64285650-chr6:64307693..64310407,3	MCF-7	breast:
8	chr17:42147987..42148825-chr6:64281830..64282387,2	Hela-S3	cervix:
9	chr6:64104502..64107247-chr6:64280921..64282714,2	K562	blood:
10	chr6:64280920..64286126-chr6:64341540..64349518,16	K562	blood:
11	chr20:47894666..47895388-chr6:64282272..64283253,2	NB4	blood:
12	chr12:120729201..120730043-chr6:64281926..64282659,3	Hela-S3	cervix:
13	chr10:96305623..96306527-chr6:64282239..64282872,2	Hela-S3	cervix:
14	chr6:64281350..64286126-chr6:64342580..64350015,13	K562	blood:
15	chr11:67272765..67273611-chr6:64282217..64282965,2	Hela-S3	cervix:
16	chr6:64228157..64231841-chr6:64281826..64284222,3	MCF-7	breast:
17	chr21:36260458..36261057-chr6:64281730..64282507,2	Hela-S3	cervix:
18	chr6:64257894..64259576-chr6:64281719..64283676,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-EYS-2	chr6:64280910-64282313	ENSG00000266680.1

Variant related genes	Relation type
ENSG00000266680	TF binding region
PTP4A1	TF binding region
ENSG00000266680	CpG island
PTP4A1	CpG island
ENSG00000202538	chromatin interactions
ENSG00000177410	chromatin interactions
ENSG00000119969	chromatin interactions
ENSG00000159216	chromatin interactions
ENSG00000112245	chromatin interactions
ENSG00000146166	chromatin interactions
ENSG00000124201	chromatin interactions
ENSG00000218274	chromatin interactions
ENSG00000110697	chromatin interactions
ENSG00000188107	chromatin interactions
ENSG00000118482	chromatin interactions
ENSG00000213312	chromatin interactions
ENSG00000141349	chromatin interactions
ENSG00000012174	chromatin interactions

Extended variants
information (count: 98 )
Associated
traits (count: 77 )

Variant overlapped rSNPs/rCNVs (count:98 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2734852	chr6:64282316-64282317	Active TSS	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
2	rs559729253	chr6:64282331-64282332	Active TSS	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
3	rs530290302	chr6:64282352-64282353	Active TSS	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
4	rs548645381	chr6:64282364-64282365	Active TSS	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
5	rs563965951	chr6:64282365-64282366	Active TSS	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
6	rs530940270	chr6:64282378-64282379	Active TSS	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
7	rs552560956	chr6:64282379-64282380	Active TSS	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
8	rs570981614	chr6:64282406-64282407	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
9	rs528563105	chr6:64282427-64282428	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
10	rs2758257	chr6:64282428-64282429	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
11	rs547056272	chr6:64282442-64282443	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
12	rs559134641	chr6:64282444-64282445	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
13	rs535635354	chr6:64282450-64282451	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
14	rs556984320	chr6:64282536-64282537	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
15	rs11547431	chr6:64282547-64282548	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
16	rs201190738	chr6:64282551-64282552	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
17	rs568763934	chr6:64282552-64282553	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
18	rs539066760	chr6:64282554-64282555	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
19	rs557295555	chr6:64282579-64282580	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
20	rs572488466	chr6:64282622-64282623	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
21	rs539979797	chr6:64282633-64282634	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
22	rs555434646	chr6:64282648-64282649	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
23	rs574971926	chr6:64282689-64282690	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
24	rs372982814	chr6:64282744-64282745	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
25	rs542371768	chr6:64282767-64282768	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
26	rs375994951	chr6:64282780-64282781	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
27	rs369092671	chr6:64282784-64282785	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
28	rs531205684	chr6:64282824-64282825	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
29	rs546237411	chr6:64282835-64282836	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
30	rs564508014	chr6:64282855-64282856	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
31	rs372582321	chr6:64282867-64282868	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
32	rs538252385	chr6:64282890-64282891	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
33	rs375621310	chr6:64282903-64282904	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
34	rs546826632	chr6:64282913-64282914	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
35	rs568532083	chr6:64282928-64282929	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
36	rs555209652	chr6:64282934-64282935	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
37	rs145384122	chr6:64282955-64282956	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
38	rs575051281	chr6:64282960-64282961	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
39	rs539380864	chr6:64282994-64282995	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
40	rs540947877	chr6:64283034-64283035	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
41	rs566175498	chr6:64283054-64283055	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
42	rs2734853	chr6:64283075-64283076	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
43	rs533770411	chr6:64283094-64283095	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
44	rs146530091	chr6:64283106-64283107	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
45	rs555182517	chr6:64283117-64283118	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
46	rs573637191	chr6:64283160-64283161	Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
47	rs576297328	chr6:64283207-64283208	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
48	rs542081581	chr6:64283208-64283209	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
49	rs557556624	chr6:64283213-64283214	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
50	rs575892820	chr6:64283282-64283283	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:77)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Lung cancer	18438408	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Cancer	20164920	CNVD
Prostate cancer	16573809	CNVD
Ovarian cancer	19835627	CNVD
Acute myeloid leukemia	20729466	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Glioblastoma multiforme	22286061	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16272173	CNVD
Developmental delay	21147756	CNVD
small cell lung cancer	20016488	CNVD
Multiple myeloma	17550852	CNVD

Chromatin state (count:310 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:64280400-64285200	Active TSS	Liver	Liver
2	chr6:64281200-64282600	Active TSS	Brain Germinal Matrix	brain
3	chr6:64281200-64282600	Active TSS	A549	lung
4	chr6:64281200-64284600	Active TSS	H9 Cell Line	embryonic stem cell
5	chr6:64281200-64284600	Active TSS	Fetal Brain Female	brain
6	chr6:64281200-64284800	Active TSS	Pancreatic Islets	Pancreatic Islet
7	chr6:64281400-64282600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
8	chr6:64281400-64284000	Active TSS	Brain Substantia Nigra	brain
9	chr6:64281400-64284400	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr6:64281400-64284600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr6:64281400-64284800	Active TSS	HUES64 Cell Line	embryonic stem cell
12	chr6:64281400-64284800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
13	chr6:64281400-64284800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr6:64281400-64285000	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr6:64281400-64285000	Active TSS	Colonic Mucosa	Colon
16	chr6:64281400-64285200	Active TSS	ES-I3 Cell Line	embryonic stem cell
17	chr6:64281400-64285400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr6:64281400-64285400	Active TSS	Stomach Smooth Muscle	stomach
19	chr6:64281400-64285600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr6:64281400-64285800	Active TSS	Fetal Intestine Large	intestine
21	chr6:64281400-64286400	Active TSS	Breast Myoepithelial Primary Cells	Breast
22	chr6:64281600-64282400	Active TSS	Right Atrium	heart
23	chr6:64281600-64282800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr6:64281600-64283600	Active TSS	Hela-S3	cervix
25	chr6:64281600-64284000	Active TSS	Fetal Intestine Small	intestine
26	chr6:64281600-64284200	Active TSS	Left Ventricle	heart
27	chr6:64281600-64284200	Active TSS	Pancreas	Pancrea
28	chr6:64281600-64284200	Active TSS	HSMMtube	muscle
29	chr6:64281600-64284400	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr6:64281600-64284400	Active TSS	Fetal Muscle Trunk	muscle
31	chr6:64281600-64284600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
32	chr6:64281600-64284600	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
33	chr6:64281600-64284600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
34	chr6:64281600-64284600	Active TSS	Placenta	Placenta
35	chr6:64281600-64284600	Active TSS	Thymus	Thymus
36	chr6:64281600-64284800	Active TSS	iPS-15b Cell Line	embryonic stem cell
37	chr6:64281600-64285400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
38	chr6:64281600-64285600	Active TSS	Psoas Muscle	Psoas
39	chr6:64281800-64282400	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
40	chr6:64281800-64283600	Active TSS	Primary T regulatory cells fromperipheralblood	blood
41	chr6:64281800-64283800	Active TSS	Fetal Heart	heart
42	chr6:64281800-64283800	Active TSS	Right Ventricle	heart
43	chr6:64281800-64284000	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
44	chr6:64281800-64284000	Active TSS	iPS-18 Cell Line	embryonic stem cell
45	chr6:64281800-64284000	Active TSS	iPS-20b Cell Line	embryonic stem cell
46	chr6:64281800-64284000	Active TSS	Brain Hippocampus Middle	brain
47	chr6:64281800-64284000	Active TSS	Duodenum Smooth Muscle	Duodenum
48	chr6:64281800-64284000	Active TSS	Placenta Amnion	Placenta Amnion
49	chr6:64281800-64284000	Active TSS	Small Intestine	intestine
50	chr6:64281800-64284200	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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