Variant report

Variant	esv3433824
Chromosome Location	chr1:211589079-211591127
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:211589207-211589407	HepG2	liver:	n/a	n/a
2	BACH1	chr1:211590179-211590180	H1-hESC	embryonic stem cell:	n/a	n/a
3	BHLHE40	chr1:211589569-211589903	HepG2	liver:	n/a	n/a
4	BHLHE40	chr1:211590267-211590632	GM12878	blood:	n/a	n/a
5	CEBPB	chr1:211589167-211589168	H1-hESC	embryonic stem cell:	n/a	n/a
6	CEBPB	chr1:211589018-211589339	Hela-S3	cervix:	n/a	chr1:211589153-211589164
7	CEBPB	chr1:211589119-211589336	HepG2	liver:	n/a	chr1:211589153-211589164
8	CEBPB	chr1:211590377-211590785	IMR90	lung:	n/a	n/a
9	CEBPB	chr1:211589066-211589316	A549	lung:	n/a	chr1:211589153-211589164
10	CHD1	chr1:211590045-211590186	H1-hESC	embryonic stem cell:	n/a	n/a
11	CREB1	chr1:211589611-211589955	A549	lung:	n/a	n/a
12	CTCF	chr1:211589619-211589842	Gliobla	brain:	n/a	chr1:211589803-211589816
13	CTCF	chr1:211589660-211589810	WI-38	lung:	n/a	n/a
14	CTCF	chr1:211589665-211589671	HUVEC	blood vessel:	n/a	n/a
15	CTCF	chr1:211589533-211589906	GM12878	blood:	n/a	chr1:211589803-211589816
16	CTCF	chr1:211589360-211589510	HAc	cerebellar:	n/a	n/a
17	CTCF	chr1:211590166-211590284	Fibrobl	skin:	n/a	chr1:211590254-211590267 chr1:211590182-211590195 chr1:211590251-211590264
18	CTCF	chr1:211589700-211589850	BJ	skin:	n/a	chr1:211589803-211589816
19	CTCF	chr1:211589600-211589750	GM12868	blood:	n/a	n/a
20	CTCF	chr1:211590076-211590314	H1-hESC	embryonic stem cell:	n/a	chr1:211590254-211590267 chr1:211590182-211590195 chr1:211590251-211590264
21	CTCF	chr1:211589665-211589836	Lung_OC	lung:	n/a	chr1:211589803-211589816
22	CTCF	chr1:211589672-211589741	HUVEC	blood vessel:	n/a	n/a
23	CTCF	chr1:211590217-211590238	GM19239	blood:	n/a	n/a
24	CTCF	chr1:211589616-211589813	HepG2	liver:	n/a	n/a
25	CTCF	chr1:211589480-211589630	HCM	heart:	n/a	n/a
26	CTCF	chr1:211589604-211589957	H1-hESC	embryonic stem cell:	n/a	chr1:211589803-211589816
27	CTCF	chr1:211589700-211589850	HA-sp	spinal cord:	n/a	chr1:211589803-211589816
28	CTCF	chr1:211589630-211589862	GM13977	blood:	n/a	chr1:211589803-211589816
29	CTCF	chr1:211589740-211589890	GM12865	blood:	n/a	chr1:211589803-211589816
30	CTCF	chr1:211589720-211589870	GM12866	blood:	n/a	chr1:211589803-211589816
31	CTCF	chr1:211589420-211589570	AG04450	lung:	n/a	n/a
32	CTCF	chr1:211589580-211589878	HepG2	liver:	n/a	chr1:211589803-211589816
33	CTCF	chr1:211589580-211589730	HA-sp	spinal cord:	n/a	n/a
34	CTCF	chr1:211590220-211590370	HMEC	breast:	n/a	chr1:211590254-211590267 chr1:211590251-211590264
35	CTCF	chr1:211589643-211589718	GM10248	blood:	n/a	n/a
36	CTCF	chr1:211589700-211589850	GM12878	blood:	n/a	chr1:211589803-211589816
37	CTCF	chr1:211589600-211589750	BE2_C	brain:	n/a	n/a
38	CTCF	chr1:211589600-211589750	HAc	cerebellar:	n/a	n/a
39	CTCF	chr1:211589620-211589770	AG10803	skin:	n/a	n/a
40	CTCF	chr1:211590206-211590213	GM19240	blood:	n/a	n/a
41	CTCF	chr1:211589647-211589771	GM12878	blood:	n/a	n/a
42	CTCF	chr1:211590101-211590284	MCF-7	breast:	n/a	chr1:211590254-211590267 chr1:211590182-211590195 chr1:211590251-211590264
43	CTCF	chr1:211589586-211589928	A549	lung:	n/a	chr1:211589803-211589816
44	CTCF	chr1:211589560-211589710	HPAF	blood vessel:	n/a	n/a
45	CTCF	chr1:211589660-211589810	AG04449	skin:	n/a	n/a
46	CTCF	chr1:211589680-211589830	RPTEC	kidney:	n/a	chr1:211589803-211589816
47	CTCF	chr1:211589460-211589610	BE2_C	brain:	n/a	n/a
48	CTCF	chr1:211589480-211589630	HA-sp	spinal cord:	n/a	n/a
49	CTCF	chr1:211590080-211590230	GM12872	blood:	n/a	chr1:211590182-211590195
50	CTCF	chr1:211589503-211589864	H1-hESC	embryonic stem cell:	n/a	chr1:211589803-211589816

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:211589678-211589728	Caco-2	colon:	n/a
2	chr1:211589139-211589189	ovcar-3	ovarian:	n/a
3	chr1:211590292-211590342	MCF10A-Er-Src	breast:	n/a
4	chr1:211590292-211590342	HRPEpiC	eye:	n/a
5	chr1:211590128-211590178	RPTEC	kidney:	n/a
6	chr1:211589678-211589728	SK-N-SH_RA	brain:	n/a
7	chr1:211589139-211589189	HCF	heart:	n/a
8	chr1:211590292-211590342	AG10803	skin:	n/a
9	chr1:211590128-211590178	HPAEpiC	pulmonary alveolar:	n/a
10	chr1:211590128-211590178	U87	brain:	n/a
11	chr1:211589139-211589189	BE2_C	brain:	n/a
12	chr1:211589139-211589189	NT2-D1	testis:	n/a
13	chr1:211590128-211590178	IMR90	lung:	fetal
14	chr1:211590292-211590342	NHDF-neo	bronchial:	n/a
15	chr1:211589139-211589189	HPAEpiC	pulmonary alveolar:	n/a
16	chr1:211589139-211589189	HAEpiC	amniotic membrane:	n/a
17	chr1:211589139-211589189	SKMC	muscle:	n/a
18	chr1:211589139-211589189	HRCEpiC	kidney:	n/a
19	chr1:211590128-211590178	SK-N-SH_RA	brain:	n/a
20	chr1:211589678-211589728	AG10803	skin:	n/a
21	chr1:211589139-211589189	A549	lung:	n/a
22	chr1:211590128-211590178	GM12892	blood:	n/a
23	chr1:211590128-211590178	AG10803	skin:	n/a
24	chr1:211589139-211589189	BJ	skin:	n/a
25	chr1:211589139-211589189	HepG2	liver:	n/a
26	chr1:211590128-211590178	HEEpiC	esophagus:	n/a
27	chr1:211589678-211589728	NH-A	brain:	n/a
28	chr1:211589678-211589728	HCM	heart:	n/a
29	chr1:211590128-211590178	ProgFib	skin:	n/a
30	chr1:211589139-211589189	GM12891	blood:	n/a
31	chr1:211589678-211589728	MCF-7	breast:	n/a
32	chr1:211589139-211589189	AG10803	skin:	n/a
33	chr1:211589139-211589189	AG09309	skin:	n/a
34	chr1:211589678-211589728	NT2-D1	testis:	n/a
35	chr1:211590292-211590342	NH-A	brain:	n/a
36	chr1:211590292-211590342	AG04450	lung:	fetal
37	chr1:211590292-211590342	HEEpiC	esophagus:	n/a
38	chr1:211589139-211589189	PFSK-1	brain:	n/a
39	chr1:211589678-211589728	A549	lung:	n/a
40	chr1:211589139-211589189	AoSMC	blood vessel:	n/a
41	chr1:211590128-211590178	Hela-S3	cervix:	n/a
42	chr1:211590128-211590178	SKMC	muscle:	n/a
43	chr1:211589139-211589189	Hela-S3	cervix:	n/a
44	chr1:211590128-211590178	SK-N-MC	brain:	n/a
45	chr1:211590292-211590342	IMR90	lung:	fetal
46	chr1:211590128-211590178	AG04449	skin:	fetal
47	chr1:211590292-211590342	NT2-D1	testis:	n/a
48	chr1:211590128-211590178	PrEC	prostate:	n/a
49	chr1:211590292-211590342	ECC-1	luminal epithelium:	n/a
50	chr1:211589139-211589189	MCF10A-Er-Src	breast:	n/a

Variant related genes	Relation type
SNX25P1	TF binding region
SNX25P1	CpG island

Extended variants
information (count: 71 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:71 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs376924048	chr1:211589087-211589088	Weak transcription ZNF genes & repeats Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs569379750	chr1:211589093-211589094	Weak transcription ZNF genes & repeats Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs558169150	chr1:211589172-211589173	Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
4	rs569602252	chr1:211589220-211589221	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs536670784	chr1:211589266-211589267	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs192111574	chr1:211589329-211589330	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs184011620	chr1:211589357-211589358	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs540274952	chr1:211589364-211589365	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs532081683	chr1:211589391-211589392	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs541218919	chr1:211589429-211589430	Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs553251099	chr1:211589450-211589451	Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs577916930	chr1:211589491-211589492	Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs376570365	chr1:211589513-211589514	Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs545284050	chr1:211589533-211589534	Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs12758491	chr1:211589572-211589573	Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs531701661	chr1:211589600-211589601	Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs114880767	chr1:211589606-211589607	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs562196326	chr1:211589628-211589629	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs187710732	chr1:211589662-211589663	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs547579675	chr1:211589705-211589706	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
21	rs565887007	chr1:211589706-211589707	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
22	rs533357095	chr1:211589716-211589717	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
23	rs552024749	chr1:211589729-211589730	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs570284955	chr1:211589746-211589747	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs537037531	chr1:211589772-211589773	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs2920908	chr1:211589785-211589786	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs567367225	chr1:211589792-211589793	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs34160213	chr1:211589798-211589799	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs553114276	chr1:211589803-211589804	Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs577879893	chr1:211589835-211589836	Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs538478346	chr1:211589988-211589989	Active TSS Weak transcription Enhancers Bivalent/Poised TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs557199035	chr1:211590025-211590026	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs575483453	chr1:211590085-211590086	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs61849002	chr1:211590110-211590111	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs561985323	chr1:211590158-211590159	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
36	rs573700431	chr1:211590229-211590230	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs541083683	chr1:211590239-211590240	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs559445183	chr1:211590240-211590241	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs190938488	chr1:211590250-211590251	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs551724285	chr1:211590253-211590254	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs564001848	chr1:211590304-211590305	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
42	rs568813639	chr1:211590317-211590318	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
43	rs12039683	chr1:211590326-211590327	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs60555365	chr1:211590328-211590329	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs116349668	chr1:211590343-211590344	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs546689271	chr1:211590389-211590390	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
47	rs571392563	chr1:211590394-211590395	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
48	rs538810763	chr1:211590405-211590406	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
49	rs556916846	chr1:211590422-211590423	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
50	rs375765605	chr1:211590435-211590436	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:89)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Liposarcoma	21253554	CNVD
Burkitt''s lymphoma	18698080	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Neuroblastoma	21899760	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17393978	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Trisomy 5 syndrome	21098271	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
Macular degeneration	22558131	CNVD
Alzheimer''s disease	21403675	CNVD
Multiple myeloma	16461302	CNVD
van der Woude syndrome	22470819	CNVD
van der Woude syndrome	20818247	CNVD
T-cell lymphomas	19863542	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	17060936	CNVD
Atypical hemolytic uremic syndrome	19861685	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Ovarian cancer	21720365	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Medulloblastoma	16783165	CNVD

Chromatin state (count:248 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211556800-211589800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr1:211573800-211589600	Weak transcription	Ovary	ovary
3	chr1:211574000-211589600	Weak transcription	Liver	Liver
4	chr1:211580400-211589600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr1:211581400-211608200	Weak transcription	Primary B cells from peripheral blood	blood
6	chr1:211581800-211589600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr1:211581800-211589600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr1:211581800-211589600	Weak transcription	Gastric	stomach
9	chr1:211581800-211590600	Weak transcription	Fetal Intestine Small	intestine
10	chr1:211585000-211589400	Weak transcription	H1 Cell Line	embryonic stem cell
11	chr1:211585400-211593200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr1:211587000-211589400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr1:211587400-211589400	Weak transcription	Brain Hippocampus Middle	brain
14	chr1:211588000-211589200	Weak transcription	Fetal Kidney	kidney
15	chr1:211588800-211589200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr1:211588800-211589400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr1:211589000-211589200	Enhancers	HepG2	liver
18	chr1:211589200-211589400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr1:211589200-211589400	Enhancers	iPS-15b Cell Line	embryonic stem cell
20	chr1:211589200-211589400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr1:211589200-211589400	Enhancers	Fetal Intestine Large	intestine
22	chr1:211589200-211589400	Flanking Active TSS	HepG2	liver
23	chr1:211589200-211589600	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
24	chr1:211589200-211589600	Active TSS	Fetal Heart	heart
25	chr1:211589200-211589600	Active TSS	Fetal Kidney	kidney
26	chr1:211589200-211589600	Enhancers	Rectal Smooth Muscle	rectum
27	chr1:211589200-211589600	Active TSS	GM12878-XiMat	blood
28	chr1:211589200-211590200	Active TSS	HUES48 Cell Line	embryonic stem cell
29	chr1:211589200-211590400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr1:211589200-211590400	Enhancers	Primary B cells from cord blood	blood
31	chr1:211589200-211590400	Active TSS	Muscle Satellite Cultured Cells	--
32	chr1:211589200-211590400	Active TSS	Adipose Nuclei	Adipose
33	chr1:211589200-211590400	Active TSS	Duodenum Mucosa	Duodenum
34	chr1:211589200-211590400	Active TSS	NH-A	brain
35	chr1:211589200-211590600	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr1:211589200-211590800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr1:211589400-211589600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
38	chr1:211589400-211589600	Enhancers	Cortex derived primary cultured neurospheres	brain
39	chr1:211589400-211589600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
40	chr1:211589400-211589600	Bivalent/Poised TSS	Fetal Brain Female	brain
41	chr1:211589400-211589600	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
42	chr1:211589400-211589800	Enhancers	Primary hematopoietic stem cells	blood
43	chr1:211589400-211589800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
44	chr1:211589400-211589800	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr1:211589400-211590000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
46	chr1:211589400-211590200	Active TSS	Brain Angular Gyrus	brain
47	chr1:211589400-211590200	Active TSS	Brain Cingulate Gyrus	brain
48	chr1:211589400-211590200	Active TSS	Fetal Intestine Large	intestine
49	chr1:211589400-211590200	Active TSS	Stomach Smooth Muscle	stomach
50	chr1:211589400-211590200	Active TSS	HMEC	breast

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