Variant report

Variant	esv3436341
Chromosome Location	chr7:6690127-6696225
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:119)
CpG islands
(count:794)
Chromatin interactive
region (count:13)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:119 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BCL3	chr7:6693791-6694049	GM12878	blood:	n/a	n/a
2	BCL3	chr7:6693271-6693492	GM12878	blood:	n/a	n/a
3	CCNT2	chr7:6694042-6694139	K562	blood:	n/a	n/a
4	ELF1	chr7:6693518-6693985	GM12878	blood:	n/a	n/a
5	ELF1	chr7:6694512-6694819	GM12878	blood:	n/a	n/a
6	GABPA	chr7:6693871-6694198	H1-hESC	embryonic stem cell:	n/a	n/a
7	GABPA	chr7:6693265-6693772	H1-hESC	embryonic stem cell:	n/a	n/a
8	HMGN3	chr7:6692437-6692466	K562	blood:	n/a	n/a
9	MYC	chr7:6693497-6693638	MCF-7	breast:	n/a	n/a
10	MYC	chr7:6692304-6692375	MCF-7	breast:	n/a	n/a
11	MYC	chr7:6696184-6696296	MCF-7	breast:	n/a	n/a
12	PAX5	chr7:6693543-6694257	GM12878	blood:	n/a	chr7:6693933-6693952
13	PAX5	chr7:6693717-6694116	GM12891	blood:	n/a	chr7:6693933-6693952
14	PAX5	chr7:6693823-6694038	GM12892	blood:	n/a	chr7:6693933-6693952
15	PAX5	chr7:6692302-6692682	GM12878	blood:	n/a	n/a
16	PAX5	chr7:6692292-6692760	GM12878	blood:	n/a	n/a
17	PAX5	chr7:6692099-6692801	GM12892	blood:	n/a	n/a
18	PAX5	chr7:6692399-6692566	GM12878	blood:	n/a	n/a
19	PAX5	chr7:6692282-6692683	GM12891	blood:	n/a	n/a
20	PAX5	chr7:6693740-6694153	GM12878	blood:	n/a	chr7:6693933-6693952
21	PAX5	chr7:6693471-6694164	GM12892	blood:	n/a	chr7:6693933-6693952
22	PAX5	chr7:6693715-6694061	GM12878	blood:	n/a	chr7:6693933-6693952
23	PAX5	chr7:6692203-6692749	GM12878	blood:	n/a	n/a
24	PBX3	chr7:6693877-6694030	GM12878	blood:	n/a	n/a
25	PBX3	chr7:6693289-6693652	GM12878	blood:	n/a	n/a
26	POLR2A	chr7:6694999-6696158	GM12892	blood:	n/a	n/a
27	POLR2A	chr7:6695522-6695528	MCF-7	breast:	n/a	n/a
28	POLR2A	chr7:6695012-6695052	K562	blood:	n/a	n/a
29	POLR2A	chr7:6693262-6693986	GM12878	blood:	n/a	n/a
30	POLR2A	chr7:6695193-6696157	K562	blood:	n/a	n/a
31	POLR2A	chr7:6695500-6695512	MCF-7	breast:	n/a	n/a
32	POLR2A	chr7:6694257-6694770	GM12892	blood:	n/a	n/a
33	POLR2A	chr7:6692595-6692612	K562	blood:	n/a	n/a
34	POLR2A	chr7:6693766-6693785	GM12878	blood:	n/a	n/a
35	POLR2A	chr7:6692113-6692728	GM12892	blood:	n/a	n/a
36	POLR2A	chr7:6694257-6694677	GM12878	blood:	n/a	n/a
37	POLR2A	chr7:6693515-6693701	MCF-7	breast:	n/a	n/a
38	POLR2A	chr7:6695401-6695521	MCF-7	breast:	n/a	n/a
39	POLR2A	chr7:6695648-6695957	GM12891	blood:	n/a	n/a
40	POLR2A	chr7:6695065-6696107	GM12878	blood:	n/a	n/a
41	POLR2A	chr7:6693715-6693717	K562	blood:	n/a	n/a
42	POLR2A	chr7:6692822-6693107	GM12878	blood:	n/a	n/a
43	POLR2A	chr7:6693800-6693821	MCF-7	breast:	n/a	n/a
44	POLR2A	chr7:6690253-6690471	K562	blood:	n/a	n/a
45	POLR2A	chr7:6695531-6695543	MCF-7	breast:	n/a	n/a
46	POLR2A	chr7:6691342-6691618	K562	blood:	n/a	n/a
47	POLR2A	chr7:6690414-6690436	MCF-7	breast:	n/a	n/a
48	POLR2A	chr7:6690246-6690251	MCF-7	breast:	n/a	n/a
49	POLR2A	chr7:6692274-6692618	GM12891	blood:	n/a	n/a
50	POLR2A	chr7:6695299-6696002	GM12892	blood:	n/a	n/a

(count:794 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:6694735-6694785	PANC-1	pancreas:	n/a
2	chr7:6694735-6694785	PANC-1	pancreas:	n/a
3	chr7:6694978-6695028	HCPEpiC	choroid plexus:	n/a
4	chr7:6690313-6690363	AG10803	skin:	n/a
5	chr7:6690313-6690363	NB4	blood:	n/a
6	chr7:6695121-6695171	HNPCEpiC	eye:	n/a
7	chr7:6690313-6690363	SK-N-MC	brain:	n/a
8	chr7:6694373-6694423	A549	lung:	n/a
9	chr7:6694978-6695028	BE2_C	brain:	n/a
10	chr7:6691949-6691999	Hela-S3	cervix:	n/a
11	chr7:6695092-6695142	HIPEpiC	eye:	n/a
12	chr7:6692873-6692923	BJ	skin:	n/a
13	chr7:6696120-6696170	GM19239	blood:	n/a
14	chr7:6693030-6693080	AG10803	skin:	n/a
15	chr7:6695121-6695171	HL-60	blood:	n/a
16	chr7:6695121-6695171	GM12878	blood:	n/a
17	chr7:6691949-6691999	HNPCEpiC	eye:	n/a
18	chr7:6692445-6692495	MCF10A-Er-Src	breast:	n/a
19	chr7:6694735-6694785	ovcar-3	ovarian:	n/a
20	chr7:6692445-6692495	HMEC	breast:	n/a
21	chr7:6696120-6696170	NHDF-neo	bronchial:	n/a
22	chr7:6692873-6692923	K562	blood:	n/a
23	chr7:6694978-6695028	GM12891	blood:	n/a
24	chr7:6694373-6694423	SK-N-MC	brain:	n/a
25	chr7:6690313-6690363	HRPEpiC	eye:	n/a
26	chr7:6690313-6690363	Hepatocyte	liver:	n/a
27	chr7:6691949-6691999	GM12878	blood:	n/a
28	chr7:6693030-6693080	PANC-1	pancreas:	n/a
29	chr7:6694978-6695028	SK-N-MC	brain:	n/a
30	chr7:6694735-6694785	BE2_C	brain:	n/a
31	chr7:6695121-6695171	HRCEpiC	kidney:	n/a
32	chr7:6692873-6692923	Caco-2	colon:	n/a
33	chr7:6694978-6695028	HEK293	kidney:	embryo
34	chr7:6690313-6690363	AG09319	gingival:	n/a
35	chr7:6694373-6694423	HRCEpiC	kidney:	n/a
36	chr7:6693334-6693384	HIPEpiC	eye:	n/a
37	chr7:6696120-6696170	GM12878	blood:	n/a
38	chr7:6694978-6695028	SK-N-SH	brain:	n/a
39	chr7:6695121-6695171	U87	brain:	n/a
40	chr7:6696120-6696170	HCF	heart:	n/a
41	chr7:6690313-6690363	ProgFib	skin:	n/a
42	chr7:6691949-6691999	HMEC	breast:	n/a
43	chr7:6693334-6693384	AG09309	skin:	n/a
44	chr7:6693838-6693888	AoSMC	blood vessel:	n/a
45	chr7:6692445-6692495	HepG2	liver:	n/a
46	chr7:6694978-6695028	NHDF-neo	bronchial:	n/a
47	chr7:6695092-6695142	GM12892	blood:	n/a
48	chr7:6691949-6691999	NH-A	brain:	n/a
49	chr7:6695092-6695142	NH-A	brain:	n/a
50	chr7:6694978-6695028	HCM	heart:	n/a

(count:13 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:6680149..6683134-chr7:6689202..6690780,2	K562	blood:
2	chr7:6679487..6682483-chr7:6695124..6696654,2	MCF-7	breast:
3	chr7:6689485..6692014-chr7:6722455..6725146,3	MCF-7	breast:
4	chr7:6650218..6651893-chr7:6687593..6690254,2	K562	blood:
5	chr7:6685863..6688294-chr7:6688920..6690681,2	MCF-7	breast:
6	chr7:6676518..6678447-chr7:6694438..6696514,2	MCF-7	breast:
7	chr7:6682112..6684474-chr7:6686272..6690280,3	MCF-7	breast:
8	chr7:6683480..6686518-chr7:6689197..6691289,3	MCF-7	breast:
9	chr7:6674759..6677679-chr7:6692100..6694240,3	MCF-7	breast:
10	chr7:6672567..6674181-chr7:6688854..6690680,2	K562	blood:
11	chr7:6660093..6661828-chr7:6695492..6697100,2	MCF-7	breast:
12	chr7:6694849..6698438-chr7:6699530..6702045,3	K562	blood:
13	chr7:6680998..6682837-chr7:6692889..6695214,2	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AC073343.1-2	chr7:6694495-6696063	ENSG00000260054.1

No data

Variant related genes	Relation type
ENSG00000260054	TF binding region
ENSG00000260054	CpG island
ENSG00000205903	chromatin interactions

Extended variants
information (count: 235 )
Associated
traits (count: 77 )

Variant overlapped rSNPs/rCNVs (count:235 , 50 per page) page: 1 2 3 4 5

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs569640764	chr7:6690130-6690131	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs537030570	chr7:6690153-6690154	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs376270579	chr7:6690173-6690174	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs549027806	chr7:6690177-6690178	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs567957197	chr7:6690212-6690213	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs535048436	chr7:6690213-6690214	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs2250243	chr7:6690240-6690241	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs578114333	chr7:6690244-6690245	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs568746113	chr7:6690257-6690258	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs539095931	chr7:6690260-6690261	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs2243544	chr7:6690270-6690271	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
12	rs575366022	chr7:6690297-6690298	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs542586652	chr7:6690313-6690314	Weak transcription Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs142791554	chr7:6690314-6690315	Weak transcription Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs6962444	chr7:6690337-6690338	Weak transcription Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs542542508	chr7:6690345-6690346	Weak transcription Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs540976610	chr7:6690369-6690370	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs561278262	chr7:6690494-6690495	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs559450934	chr7:6690509-6690510	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs191405373	chr7:6690520-6690521	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs528072867	chr7:6690549-6690550	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs563351835	chr7:6690569-6690570	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs536299037	chr7:6690586-6690587	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs567633669	chr7:6690658-6690659	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs147435797	chr7:6690691-6690692	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs567434613	chr7:6690702-6690703	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs183884221	chr7:6690707-6690708	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs567162570	chr7:6690730-6690731	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs187097164	chr7:6690741-6690742	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs138170677	chr7:6690762-6690763	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs571780639	chr7:6690768-6690769	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs149458759	chr7:6690799-6690800	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs557158579	chr7:6690808-6690809	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs575328450	chr7:6690814-6690815	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs556164753	chr7:6690821-6690822	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs78019690	chr7:6690823-6690824	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs554593968	chr7:6690850-6690851	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs191828863	chr7:6690851-6690852	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs573157691	chr7:6690854-6690855	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs541290895	chr7:6690905-6690906	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs559402769	chr7:6690921-6690922	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs75669728	chr7:6690922-6690923	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs34783975	chr7:6690923-6690924	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs545222532	chr7:6690927-6690928	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs563516032	chr7:6690929-6690930	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs530580893	chr7:6690993-6690994	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs185066639	chr7:6691008-6691009	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs560912542	chr7:6691012-6691013	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs528092794	chr7:6691013-6691014	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs372520606	chr7:6691106-6691107	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:77)

Disease	PMID	Source
Lynch syndrome	22585707	CNVD
Follicular lymphoma	20505157	CNVD
Breast cancer	16397240	CNVD
Raine Syndrome	17924334	CNVD
Diffuse large b-cell lymphoma	21266526	CNVD
Melanoma	18172304	CNVD
Sudden cardiac death	19188705	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Glioma	18556773	CNVD
Ovarian cancer	21720365	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Ovarian cancer	22174824	CNVD
Urothelial carcinoma	18382360	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Leukemia	23979775	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Bladder cancer	21909424	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	21045282	CNVD
Disorders of sex development	21048976	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Acute myeloid leukemia	21251322	CNVD
Glioblastoma multiforme	21525872	CNVD
Autism	20685689	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:384 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:6678000-6691600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr7:6678200-6698200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr7:6678400-6691600	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr7:6678400-6691600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr7:6678800-6691200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr7:6678800-6691400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr7:6679000-6692200	Strong transcription	Primary T cells from cord blood	blood
8	chr7:6679000-6692600	Strong transcription	Primary B cells from peripheral blood	blood
9	chr7:6679000-6695200	Strong transcription	Stomach Smooth Muscle	stomach
10	chr7:6679000-6695400	Strong transcription	Brain Inferior Temporal Lobe	brain
11	chr7:6679200-6690200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
12	chr7:6679200-6690200	Strong transcription	Lung	lung
13	chr7:6679200-6690200	Strong transcription	NHLF	lung
14	chr7:6679200-6695400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr7:6679400-6691600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
16	chr7:6679400-6691600	Strong transcription	Liver	Liver
17	chr7:6679400-6696400	Strong transcription	Brain Hippocampus Middle	brain
18	chr7:6679400-6703600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
19	chr7:6679600-6693200	Strong transcription	Rectal Smooth Muscle	rectum
20	chr7:6679600-6699200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
21	chr7:6679800-6690600	Strong transcription	Fetal Muscle Leg	muscle
22	chr7:6679800-6695600	Strong transcription	Primary T helper cells fromperipheralblood	blood
23	chr7:6680000-6691600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
24	chr7:6680000-6692600	Strong transcription	Primary T helper cells PMA-I stimulated	--
25	chr7:6680000-6692600	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
26	chr7:6680000-6695200	Strong transcription	Duodenum Mucosa	Duodenum
27	chr7:6680200-6690200	Strong transcription	Placenta	Placenta
28	chr7:6680200-6690800	Strong transcription	Esophagus	oesophagus
29	chr7:6680200-6691600	Strong transcription	Colonic Mucosa	Colon
30	chr7:6680200-6691800	Weak transcription	Fetal Brain Male	brain
31	chr7:6680400-6691000	Strong transcription	Sigmoid Colon	Sigmoid Colon
32	chr7:6680400-6691600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
33	chr7:6680400-6691800	Strong transcription	Adipose Nuclei	Adipose
34	chr7:6680400-6691800	Strong transcription	Ovary	ovary
35	chr7:6680400-6694600	Strong transcription	Brain Cingulate Gyrus	brain
36	chr7:6680400-6695200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr7:6680400-6695600	Strong transcription	Rectal Mucosa Donor 29	rectum
38	chr7:6680400-6698600	Weak transcription	Right Atrium	heart
39	chr7:6680600-6691800	Strong transcription	Gastric	stomach
40	chr7:6680600-6692600	Strong transcription	Primary T cells fromperipheralblood	blood
41	chr7:6680600-6695200	Strong transcription	Duodenum Smooth Muscle	Duodenum
42	chr7:6680600-6695400	Strong transcription	Brain Anterior Caudate	brain
43	chr7:6680800-6692400	Strong transcription	Skeletal Muscle Female	skeletal muscle
44	chr7:6681000-6693400	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
45	chr7:6681400-6690200	Weak transcription	HMEC	breast
46	chr7:6681600-6690800	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
47	chr7:6681800-6690200	Weak transcription	Hela-S3	cervix
48	chr7:6682400-6698800	Weak transcription	Fetal Kidney	kidney
49	chr7:6683200-6693400	Weak transcription	Stomach Mucosa	stomach
50	chr7:6683800-6696600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links