Variant report

Variant	esv3442208
Chromosome Location	chr4:69222907-69288205
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:968)
CpG islands
(count:61)
Chromatin interactive
region (count:32)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:968 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:69241809-69241916	K562	blood:	n/a	n/a
2	ARID3A	chr4:69241724-69242046	HepG2	liver:	n/a	n/a
3	ATF1	chr4:69226955-69227269	K562	blood:	n/a	n/a
4	ATF2	chr4:69274062-69274402	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF2	chr4:69269850-69270608	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr4:69269806-69270384	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr4:69271370-69272360	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr4:69274713-69275097	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr4:69271320-69273979	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr4:69275508-69277104	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF2	chr4:69273374-69273928	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF2	chr4:69272567-69273233	H1-hESC	embryonic stem cell:	n/a	n/a
13	BCL11A	chr4:69273602-69273847	H1-hESC	embryonic stem cell:	n/a	n/a
14	BCL11A	chr4:69233545-69233815	H1-hESC	embryonic stem cell:	n/a	n/a
15	BCL11A	chr4:69275877-69276040	H1-hESC	embryonic stem cell:	n/a	n/a
16	BCL11A	chr4:69233648-69233855	H1-hESC	embryonic stem cell:	n/a	n/a
17	BHLHE40	chr4:69241727-69241977	K562	blood:	n/a	n/a
18	BHLHE40	chr4:69250331-69250703	K562	blood:	n/a	n/a
19	BHLHE40	chr4:69226696-69227246	K562	blood:	n/a	n/a
20	BHLHE40	chr4:69241718-69241986	HepG2	liver:	n/a	n/a
21	BHLHE40	chr4:69249117-69249120	K562	blood:	n/a	n/a
22	BHLHE40	chr4:69226735-69227270	HepG2	liver:	n/a	n/a
23	BHLHE40	chr4:69241744-69242010	GM12878	blood:	n/a	n/a
24	BRCA1	chr4:69227012-69227512	Hela-S3	cervix:	n/a	n/a
25	BRCA1	chr4:69272255-69272927	H1-hESC	embryonic stem cell:	n/a	n/a
26	BRCA1	chr4:69234386-69235223	Hela-S3	cervix:	n/a	n/a
27	BRCA1	chr4:69233556-69233810	H1-hESC	embryonic stem cell:	n/a	n/a
28	CBX3	chr4:69241617-69242163	HCT-116	colon:	n/a	n/a
29	CEBPB	chr4:69226869-69227428	A549	lung:	n/a	chr4:69227201-69227212
30	CEBPB	chr4:69278653-69278888	HepG2	liver:	n/a	n/a
31	CEBPB	chr4:69226854-69227350	HepG2	liver:	n/a	chr4:69227201-69227212
32	CEBPB	chr4:69226839-69227396	K562	blood:	n/a	chr4:69227201-69227212
33	CEBPB	chr4:69226929-69227300	HepG2	liver:	n/a	chr4:69227201-69227212
34	CEBPB	chr4:69226805-69227403	Hela-S3	cervix:	n/a	chr4:69227201-69227212
35	CEBPB	chr4:69226967-69227348	HepG2	liver:	n/a	chr4:69227201-69227212
36	CEBPB	chr4:69241767-69242052	A549	lung:	n/a	n/a
37	CEBPB	chr4:69278558-69278870	K562	blood:	n/a	n/a
38	CEBPB	chr4:69234378-69234940	HCT-116	colon:	n/a	n/a
39	CEBPB	chr4:69234201-69235527	Hela-S3	cervix:	n/a	n/a
40	CEBPB	chr4:69234206-69234950	IMR90	lung:	n/a	n/a
41	CEBPB	chr4:69238322-69238705	Hela-S3	cervix:	n/a	n/a
42	CEBPB	chr4:69234492-69234849	ECC-1	luminal epithelium:	n/a	n/a
43	CEBPB	chr4:69226836-69227393	IMR90	lung:	n/a	chr4:69227201-69227212
44	CEBPB	chr4:69238343-69238762	IMR90	lung:	n/a	n/a
45	CEBPB	chr4:69226851-69227342	HepG2	liver:	n/a	chr4:69227201-69227212
46	CEBPB	chr4:69226954-69227259	H1-hESC	embryonic stem cell:	n/a	chr4:69227201-69227212
47	CEBPB	chr4:69271962-69272301	K562	blood:	n/a	n/a
48	CEBPB	chr4:69234422-69234860	ECC-1	luminal epithelium:	n/a	n/a
49	CEBPB	chr4:69234211-69234355	A549	lung:	n/a	n/a
50	CEBPB	chr4:69279178-69279415	H1-hESC	embryonic stem cell:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:69239481-69239531	A549	lung:	n/a
2	chr4:69239481-69239531	PrEC	prostate:	n/a
3	chr4:69239481-69239531	AoSMC	blood vessel:	n/a
4	chr4:69239481-69239531	HRCEpiC	kidney:	n/a
5	chr4:69239481-69239531	GM12892	blood:	n/a
6	chr4:69239481-69239531	ovcar-3	ovarian:	n/a
7	chr4:69239481-69239531	H1-hESC	embryonic stem cell:	embryo
8	chr4:69239481-69239531	GM06990	blood:	n/a
9	chr4:69239481-69239531	T-47D	breast:	n/a
10	chr4:69239481-69239531	AG09309	skin:	n/a
11	chr4:69239481-69239531	RPTEC	kidney:	n/a
12	chr4:69239481-69239531	HUVEC	blood vessel:	n/a
13	chr4:69239481-69239531	LNCaP	prostate:	n/a
14	chr4:69239481-69239531	ECC-1	luminal epithelium:	n/a
15	chr4:69239481-69239531	NH-A	brain:	n/a
16	chr4:69239481-69239531	AG10803	skin:	n/a
17	chr4:69239481-69239531	NHBE	bronchial:	n/a
18	chr4:69239481-69239531	Hepatocyte	liver:	n/a
19	chr4:69239481-69239531	SKMC	muscle:	n/a
20	chr4:69239481-69239531	Hela-S3	cervix:	n/a
21	chr4:69239481-69239531	AG09319	gingival:	n/a
22	chr4:69239481-69239531	U87	brain:	n/a
23	chr4:69239481-69239531	HCM	heart:	n/a
24	chr4:69239481-69239531	HAEpiC	amniotic membrane:	n/a
25	chr4:69239481-69239531	CMK	blood:	n/a
26	chr4:69239481-69239531	GM19239	blood:	n/a
27	chr4:69239481-69239531	HepG2	liver:	n/a
28	chr4:69239481-69239531	PFSK-1	brain:	n/a
29	chr4:69239481-69239531	HRE	kidney:	n/a
30	chr4:69239481-69239531	MCF-7	breast:	n/a
31	chr4:69239481-69239531	AG04449	skin:	fetal
32	chr4:69239481-69239531	Caco-2	colon:	n/a
33	chr4:69239481-69239531	HCPEpiC	choroid plexus:	n/a
34	chr4:69239481-69239531	HCT-116	colon:	n/a
35	chr4:69239481-69239531	K562	blood:	n/a
36	chr4:69239481-69239531	SK-N-SH	brain:	n/a
37	chr4:69239481-69239531	BJ	skin:	n/a
38	chr4:69239481-69239531	GM12878	blood:	n/a
39	chr4:69239481-69239531	BE2_C	brain:	n/a
40	chr4:69239481-69239531	HNPCEpiC	eye:	n/a
41	chr4:69239481-69239531	SK-N-SH_RA	brain:	n/a
42	chr4:69239481-69239531	Jurkat	blood:	n/a
43	chr4:69239481-69239531	SAEC	small airway:	n/a
44	chr4:69239481-69239531	PANC-1	pancreas:	n/a
45	chr4:69239481-69239531	NB4	blood:	n/a
46	chr4:69239481-69239531	NT2-D1	testis:	n/a
47	chr4:69239481-69239531	SK-N-MC	brain:	n/a
48	chr4:69239481-69239531	HEK293	kidney:	embryo
49	chr4:69239481-69239531	AG04450	lung:	fetal
50	chr4:69239481-69239531	GM12891	blood:	n/a

(count:32 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:34663114..34663782-chr4:69227413..69228097,2	HCT-116	colon:
2	chr4:69235222..69236888-chr4:69330787..69333108,2	MCF-7	breast:
3	chr4:69227116..69229844-chr4:69232808..69235424,3	MCF-7	breast:
4	chr4:69225977..69228923-chr4:69232908..69234757,2	MCF-7	breast:
5	chr4:69214293..69217151-chr4:69228471..69232453,4	MCF-7	breast:
6	chr4:69261479..69263949-chr4:69265088..69267687,3	K562	blood:
7	chr4:69218178..69222853-chr4:69225128..69229971,4	MCF-7	breast:
8	chr4:69211727..69213859-chr4:69233011..69234860,2	MCF-7	breast:
9	chr4:69225977..69228923-chr4:69232908..69234757,2	MCF-7	breast:
10	chr4:69215623..69217257-chr4:69223391..69225244,2	MCF-7	breast:
11	chr4:69214098..69215634-chr4:69235366..69237032,2	MCF-7	breast:
12	chr4:69213603..69215709-chr4:69245624..69247287,2	K562	blood:
13	chr4:69194867..69197488-chr4:69233410..69236002,2	MCF-7	breast:
14	chr4:69214168..69215842-chr4:69249504..69252039,2	MCF-7	breast:
15	chr4:69261479..69263949-chr4:69265088..69267687,3	K562	blood:
16	chr4:69208163..69209683-chr4:69233967..69235522,2	MCF-7	breast:
17	chr4:69243264..69245251-chr4:69248916..69251183,2	K562	blood:
18	chr4:69212213..69214534-chr4:69225131..69226946,2	MCF-7	breast:
19	chr4:69225743..69228378-chr4:69231035..69233208,2	K562	blood:
20	chr4:69214269..69220088-chr4:69224464..69229346,6	MCF-7	breast:
21	chr4:69143211..69145096-chr4:69239415..69241951,2	K562	blood:
22	chr4:69243264..69245251-chr4:69248916..69251183,2	K562	blood:
23	chr4:69218952..69221343-chr4:69221565..69223660,2	K562	blood:
24	chr4:69177090..69179857-chr4:69251602..69253290,2	MCF-7	breast:
25	chr4:69210254..69212514-chr4:69233666..69236534,2	MCF-7	breast:
26	chr4:68793797..68796085-chr4:69232793..69234726,2	MCF-7	breast:
27	chr4:69225743..69228378-chr4:69231035..69233208,2	K562	blood:
28	chr4:69215315..69216150-chr4:69241399..69242116,2	MCF-7	breast:
29	chr4:69212970..69215845-chr4:69239349..69242311,2	MCF-7	breast:
30	chr4:69227116..69229844-chr4:69232808..69235424,3	MCF-7	breast:
31	chr4:69218330..69220312-chr4:69233366..69236029,2	MCF-7	breast:
32	chr4:69236161..69238300-chr4:69240878..69243749,2	MCF-7	breast:

No data

Variant related genes	Relation type
MT2P1	TF binding region
MT2P1	CpG island
ENSG00000162840	chromatin interactions
ENSG00000257103	chromatin interactions
ENSG00000083896	chromatin interactions

Extended variants
information (count: 2526 )
Associated
traits (count: 94 )

Variant overlapped rSNPs/rCNVs (count:2526 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs537446199	chr4:69222925-69222926	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs140632598	chr4:69222956-69222957	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs199581110	chr4:69222975-69222976	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs17652284	chr4:69223057-69223058	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs553496838	chr4:69223123-69223124	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs573363425	chr4:69223136-69223137	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs145636918	chr4:69223149-69223150	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs568071533	chr4:69223153-69223154	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs576050219	chr4:69223164-69223165	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs34729822	chr4:69223165-69223166	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs554083997	chr4:69223175-69223176	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs373517118	chr4:69223184-69223185	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs544603795	chr4:69223190-69223191	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs533947824	chr4:69223192-69223193	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs540728777	chr4:69223222-69223223	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs546795768	chr4:69223261-69223262	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs554016259	chr4:69223272-69223273	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs560253365	chr4:69223284-69223285	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs529081921	chr4:69223295-69223296	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs549208718	chr4:69223318-69223319	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs568794618	chr4:69223326-69223327	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs116544233	chr4:69223339-69223340	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs184191365	chr4:69223346-69223347	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs550933211	chr4:69223419-69223420	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs570925135	chr4:69223469-69223470	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs533600272	chr4:69223476-69223477	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs114620550	chr4:69223491-69223492	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs116020371	chr4:69223519-69223520	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs187365186	chr4:69223564-69223565	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs555964193	chr4:69223587-69223588	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs138173794	chr4:69223588-69223589	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs544945786	chr4:69223623-69223624	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs35948072	chr4:69223684-69223685	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs57596420	chr4:69223685-69223686	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs370542664	chr4:69223688-69223689	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs192371938	chr4:69223715-69223716	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs578077312	chr4:69223742-69223743	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs371685913	chr4:69223747-69223748	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs4860930	chr4:69223787-69223788	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs560381104	chr4:69223794-69223795	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs530702948	chr4:69223803-69223804	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs529430221	chr4:69223808-69223809	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs548882090	chr4:69223837-69223838	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs562363501	chr4:69223839-69223840	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs531467097	chr4:69223850-69223851	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs551271034	chr4:69223859-69223860	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs185506273	chr4:69223875-69223876	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs549170439	chr4:69223876-69223877	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs533549189	chr4:69223892-69223893	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs547408281	chr4:69223902-69223903	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:94)

Disease	PMID	Source
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Lung cancer	18438408	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	21922591	CNVD
Parkinson disease	21956041	CNVD
Mental retardation	20522426	CNVD
delayed speech	20522426	CNVD
growth disorder	20522426	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Parkinson disease	18923514	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Cancer	21183584	CNVD
Breast cancer	16272173	CNVD
Multiple myeloma	16616336	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Colorectal cancer	16272173	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	16573809	CNVD
Osteoporosis	18992858	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Myelodysplastic syndrome	21251322	CNVD
Multiple myeloma	17550852	CNVD
Graft versus host disease	20877625	CNVD
Breast cancer	21990379	CNVD
Myelofibrosis	22110671	CNVD
Osteoporosis	20877625	CNVD
Osteoporosis	19737800	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD
Glioblastoma multiforme	21138945	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Oral cancer	21386901	CNVD
Alcoholism	21790672	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Schizophrenia	20967226	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Breast cancer	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:903 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:69216400-69224400	Weak transcription	HepG2	liver
2	chr4:69219200-69224800	Weak transcription	Fetal Intestine Small	intestine
3	chr4:69219200-69225000	Weak transcription	Fetal Intestine Large	intestine
4	chr4:69219600-69227400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr4:69223400-69223600	Enhancers	Fetal Kidney	kidney
6	chr4:69223600-69228200	Weak transcription	Fetal Kidney	kidney
7	chr4:69224400-69225000	Enhancers	HepG2	liver
8	chr4:69224800-69225200	Enhancers	Fetal Intestine Small	intestine
9	chr4:69224800-69225600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
10	chr4:69224800-69225600	Enhancers	GM12878-XiMat	blood
11	chr4:69224800-69227600	Enhancers	Placenta	Placenta
12	chr4:69224800-69228000	Enhancers	NHEK	skin
13	chr4:69225000-69225200	Flanking Active TSS	HepG2	liver
14	chr4:69225000-69225600	Enhancers	Fetal Intestine Large	intestine
15	chr4:69225200-69225400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr4:69225200-69225400	Active TSS	HepG2	liver
17	chr4:69225200-69225600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr4:69225200-69225600	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
19	chr4:69225200-69225600	Enhancers	Primary T helper cells PMA-I stimulated	--
20	chr4:69225200-69225600	Enhancers	Cortex derived primary cultured neurospheres	brain
21	chr4:69225200-69226600	Weak transcription	Fetal Intestine Small	intestine
22	chr4:69225400-69225600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr4:69225400-69225800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr4:69225400-69226600	Weak transcription	HepG2	liver
25	chr4:69225400-69226800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr4:69225400-69227600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr4:69225600-69226600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr4:69225600-69226600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr4:69225600-69226800	Weak transcription	Fetal Intestine Large	intestine
30	chr4:69225600-69227800	Enhancers	HMEC	breast
31	chr4:69225800-69226800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr4:69226200-69227800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
33	chr4:69226400-69227400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr4:69226400-69227600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
35	chr4:69226400-69227800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr4:69226400-69227800	Enhancers	Hela-S3	cervix
37	chr4:69226600-69227200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr4:69226600-69227400	Enhancers	Fetal Intestine Small	intestine
39	chr4:69226600-69227400	Enhancers	K562	blood
40	chr4:69226600-69227600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr4:69226600-69227600	Enhancers	Muscle Satellite Cultured Cells	--
42	chr4:69226600-69227800	Enhancers	HepG2	liver
43	chr4:69226800-69227200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
44	chr4:69226800-69227200	Enhancers	Esophagus	oesophagus
45	chr4:69226800-69227200	Enhancers	Pancreas	Pancrea
46	chr4:69226800-69227200	Enhancers	Osteobl	bone
47	chr4:69226800-69227400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
48	chr4:69226800-69227400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
49	chr4:69226800-69227600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr4:69226800-69227600	Enhancers	Fetal Intestine Large	intestine

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links