Variant report

Variant	esv3495695
Chromosome Location	chr3:75276712-75279027
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 120 )
Associated
traits (count: 77 )

Variant overlapped rSNPs/rCNVs (count:120 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs532636150	chr3:75276714-75276715	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs547391429	chr3:75276729-75276730	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs549075608	chr3:75276730-75276731	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs72897074	chr3:75276732-75276733	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs73840447	chr3:75276760-75276761	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs559283628	chr3:75276781-75276782	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs376777957	chr3:75276785-75276786	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs73115269	chr3:75276811-75276812	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs73115270	chr3:75276815-75276816	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs548443602	chr3:75276821-75276822	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs80119662	chr3:75276828-75276829	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs76404003	chr3:75276838-75276839	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs73840448	chr3:75276851-75276852	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs73115271	chr3:75276863-75276864	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs570307154	chr3:75276886-75276887	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs576447637	chr3:75276897-75276898	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs72897076	chr3:75276902-75276903	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs552726029	chr3:75276906-75276907	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs566447369	chr3:75276912-75276913	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs191982750	chr3:75276930-75276931	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs183952205	chr3:75276938-75276939	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs376910399	chr3:75276939-75276940	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs574459125	chr3:75276947-75276948	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs535421713	chr3:75277047-75277048	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs542245195	chr3:75277048-75277049	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs574015094	chr3:75277087-75277088	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs139022297	chr3:75277109-75277110	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs575489027	chr3:75277127-75277128	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs144005043	chr3:75277145-75277146	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs76270045	chr3:75277146-75277147	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs186019244	chr3:75277150-75277151	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs541093799	chr3:75277164-75277165	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs9834028	chr3:75277177-75277178	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs200975875	chr3:75277189-75277190	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs538038094	chr3:75277206-75277207	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs530063408	chr3:75277210-75277211	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs191167703	chr3:75277213-75277214	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs532351069	chr3:75277218-75277219	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs563867023	chr3:75277234-75277235	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs182130471	chr3:75277238-75277239	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs552496733	chr3:75277244-75277245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs570981383	chr3:75277251-75277252	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs534721197	chr3:75277279-75277280	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs546747907	chr3:75277291-75277292	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs568147800	chr3:75277332-75277333	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs35672882	chr3:75277387-75277388	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs187188589	chr3:75277402-75277403	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs556913799	chr3:75277423-75277424	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs552397333	chr3:75277446-75277447	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs539680286	chr3:75277453-75277454	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:77)

Disease	PMID	Source
Acute myeloid leukemia	20729466	CNVD
Glioblastoma multiforme	21080181	CNVD
Melanoma	18172304	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	21251322	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Autism	22102821	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Prostate cancer	18632612	CNVD
Metanephric adenoma	20802469	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21509527	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	21399695	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Colorectal cancer	16272173	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Soft tissue tumor	16732325	CNVD
Chronic lymphocytic leukemia	20421269	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:75270800-75284600	Weak transcription	H9 Cell Line	embryonic stem cell

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