Variant report

Variant	esv3693446
Chromosome Location	chr2:183785598-183833514
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:399)
CpG islands
(count:0)
Chromatin interactive
region (count:39)
LncRNA
region (count:9)
Mature miRNA
region (count: 0)
miRNA target
sites (count:6)

(count:399 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr2:183814330-183814953	K562	blood:	n/a	n/a
2	ARID3A	chr2:183806683-183807362	K562	blood:	n/a	n/a
3	ARID3A	chr2:183817079-183817215	K562	blood:	n/a	n/a
4	ARID3A	chr2:183804408-183804539	K562	blood:	n/a	n/a
5	ATF1	chr2:183806793-183807002	K562	blood:	n/a	n/a
6	ATF1	chr2:183813973-183814881	K562	blood:	n/a	n/a
7	ATF2	chr2:183785311-183785714	GM12878	blood:	n/a	n/a
8	ATF2	chr2:183785387-183785939	GM12878	blood:	n/a	n/a
9	ATF3	chr2:183814349-183814528	K562	blood:	n/a	n/a
10	ATF3	chr2:183814286-183814639	K562	blood:	n/a	n/a
11	BACH1	chr2:183814525-183814793	K562	blood:	n/a	n/a
12	BACH1	chr2:183802778-183802790	H1-hESC	embryonic stem cell:	n/a	n/a
13	BHLHE40	chr2:183813878-183814800	K562	blood:	n/a	n/a
14	BHLHE40	chr2:183811708-183811937	K562	blood:	n/a	n/a
15	BRCA1	chr2:183826850-183827035	Hela-S3	cervix:	n/a	n/a
16	CBX3	chr2:183814163-183814993	K562	blood:	n/a	n/a
17	CCNT2	chr2:183818605-183818798	K562	blood:	n/a	n/a
18	CCNT2	chr2:183806758-183806992	K562	blood:	n/a	chr2:183806933-183806953
19	CCNT2	chr2:183808310-183808344	K562	blood:	n/a	n/a
20	CEBPB	chr2:183801938-183802188	HepG2	liver:	n/a	n/a
21	CEBPB	chr2:183789057-183789390	ECC-1	luminal epithelium:	n/a	chr2:183789214-183789225
22	CEBPB	chr2:183801968-183802188	IMR90	lung:	n/a	n/a
23	CEBPB	chr2:183805963-183806187	A549	lung:	n/a	chr2:183806037-183806050 chr2:183806037-183806048
24	CEBPB	chr2:183796210-183796316	HepG2	liver:	n/a	n/a
25	CEBPB	chr2:183789133-183789360	H1-hESC	embryonic stem cell:	n/a	chr2:183789214-183789225
26	CEBPB	chr2:183805889-183806209	IMR90	lung:	n/a	chr2:183806037-183806050 chr2:183806037-183806048
27	CEBPB	chr2:183814205-183814531	Hela-S3	cervix:	n/a	n/a
28	CEBPB	chr2:183817827-183818192	IMR90	lung:	n/a	n/a
29	CEBPB	chr2:183788984-183789445	ECC-1	luminal epithelium:	n/a	chr2:183789406-183789415 chr2:183789404-183789415 chr2:183789214-183789225
30	CEBPB	chr2:183805923-183806246	K562	blood:	n/a	chr2:183806037-183806050 chr2:183806037-183806048
31	CEBPB	chr2:183789048-183789461	K562	blood:	n/a	chr2:183789406-183789415 chr2:183789404-183789415 chr2:183789214-183789225
32	CEBPB	chr2:183785503-183785665	A549	lung:	n/a	n/a
33	CEBPB	chr2:183788992-183789427	A549	lung:	n/a	chr2:183789406-183789415 chr2:183789404-183789415 chr2:183789214-183789225
34	CEBPB	chr2:183805875-183806224	K562	blood:	n/a	chr2:183806037-183806050 chr2:183806037-183806048
35	CEBPB	chr2:183814199-183814896	K562	blood:	n/a	n/a
36	CEBPB	chr2:183785410-183785694	HepG2	liver:	n/a	n/a
37	CEBPB	chr2:183789052-183789457	HepG2	liver:	n/a	chr2:183789406-183789415 chr2:183789404-183789415 chr2:183789214-183789225
38	CEBPB	chr2:183827071-183827235	A549	lung:	n/a	n/a
39	CEBPB	chr2:183814252-183814507	A549	lung:	n/a	n/a
40	CEBPB	chr2:183805898-183806206	HepG2	liver:	n/a	chr2:183806037-183806050 chr2:183806037-183806048
41	CEBPB	chr2:183789044-183789416	IMR90	lung:	n/a	chr2:183789406-183789415 chr2:183789404-183789415 chr2:183789214-183789225
42	CEBPB	chr2:183805961-183806135	H1-hESC	embryonic stem cell:	n/a	chr2:183806037-183806050 chr2:183806037-183806048
43	CEBPB	chr2:183789064-183789388	A549	lung:	n/a	chr2:183789214-183789225
44	CEBPB	chr2:183806498-183806701	K562	blood:	n/a	n/a
45	CEBPB	chr2:183789031-183789409	Hela-S3	cervix:	n/a	chr2:183789214-183789225
46	CREB1	chr2:183785326-183785766	GM12878	blood:	n/a	n/a
47	CTCF	chr2:183796620-183796770	AG04449	skin:	n/a	n/a
48	CTCF	chr2:183792998-183793003	Kidney_OC	kidney:	n/a	n/a
49	CTCF	chr2:183796660-183796810	HMF	breast:	n/a	n/a
50	CTCF	chr2:183822720-183822870	HCPEpiC	choroid plexus:	n/a	n/a

No data

(count:39 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr2:183808744..183810851-chr2:183812471..183814250,2	K562	blood:
2	chr2:183797327..183799233-chr2:183873763..183876120,2	K562	blood:
3	chr2:183816568..183818121-chr2:183820543..183822285,2	K562	blood:
4	chr2:183798092..183800386-chr2:183804710..183808367,3	K562	blood:
5	chr2:183786363..183790600-chr2:183794242..183796759,3	K562	blood:
6	chr2:183826876..183828751-chr2:183831035..183834010,2	K562	blood:
7	chr2:183826876..183828751-chr2:183831035..183834010,2	K562	blood:
8	chr2:183790442..183793000-chr2:183794575..183797188,2	K562	blood:
9	chr2:183799066..183801918-chr2:183816085..183818420,2	K562	blood:
10	chr2:183782658..183785008-chr2:183787087..183788615,2	MCF-7	breast:
11	chr2:183808744..183810851-chr2:183812471..183814250,2	K562	blood:
12	chr2:183793765..183795351-chr2:183927978..183930744,2	K562	blood:
13	chr2:183817340..183818993-chr2:183832231..183833794,2	MCF-7	breast:
14	chr2:183799375..183801033-chr2:183802943..183804638,2	K562	blood:
15	chr2:183812719..183815141-chr2:183816615..183820380,4	K562	blood:
16	chr2:183786363..183790600-chr2:183794242..183796759,3	K562	blood:
17	chr2:183804799..183806405-chr2:183817815..183819444,2	K562	blood:
18	chr2:183783194..183785818-chr2:183787179..183789437,2	MCF-7	breast:
19	chr2:183816933..183819427-chr2:183831655..183834604,2	K562	blood:
20	chr2:183781828..183783867-chr2:183783906..183785691,2	MCF-7	breast:
21	chr2:183783194..183785818-chr2:183787179..183789437,2	MCF-7	breast:
22	chr2:183798092..183800386-chr2:183804710..183808367,3	K562	blood:
23	chr2:183805862..183807763-chr2:183903023..183904588,2	K562	blood:
24	chr2:183787824..183790280-chr2:183794708..183796727,2	K562	blood:
25	chr2:183799533..183801782-chr2:183801980..183804443,2	K562	blood:
26	chr2:183816933..183819427-chr2:183831655..183834604,2	K562	blood:
27	chr2:183765609..183768304-chr2:183794647..183796212,2	K562	blood:
28	chr2:183812719..183815141-chr2:183816615..183820380,4	K562	blood:
29	chr2:183794651..183797325-chr2:183799133..183802180,3	K562	blood:
30	chr2:183581828..183583898-chr2:183803205..183805193,2	K562	blood:
31	chr2:183817340..183818993-chr2:183832231..183833794,2	MCF-7	breast:
32	chr2:183830605..183832244-chr2:183840851..183842745,2	K562	blood:
33	chr2:183811184..183814871-chr2:183818695..183820986,3	K562	blood:
34	chr2:183808744..183810335-chr2:183812750..183814867,2	K562	blood:
35	chr2:183787824..183790280-chr2:183794708..183796727,2	K562	blood:
36	chr2:183778975..183782738-chr2:183784220..183787705,4	K562	blood:
37	chr2:183808744..183810335-chr2:183812750..183814867,2	K562	blood:
38	chr2:183804799..183806405-chr2:183817815..183819444,2	K562	blood:
39	chr2:183722339..183724841-chr2:183796407..183799303,2	K562	blood:

(count:9 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NCKAP1-2	chr2:183786673-183786706	NONHSAT075924
2	lnc-FRZB-3	chr2:183818028-183818059	NONHSAT075930
3	lnc-FRZB-3	chr2:183821190-183821772	NONHSAT075930
4	lnc-DNAJC10-5	chr2:183784638-183787512	NONHSAT075926
5	lnc-NCKAP1-2	chr2:183785780-183786620	NONHSAT075924
6	lnc-FRZB-2	chr2:183800021-183800231	NONHSAT075929
7	lnc-NCKAP1-2	chr2:183786808-183787397	NONHSAT075924
8	lnc-DNAJC10-5	chr2:183788072-183788310	NONHSAT075926
9	lnc-FRZB-2	chr2:183799130-183799560	NONHSAT075929

No data

(count:6 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	NCKAP1	hsa-miR-30a-5p	chr2:183790122-183790143
2	NCKAP1	hsa-miR-132-3p	chr2:183789619-183789640
3	NCKAP1	hsa-miR-142-3p	chr2:183789625-183789644
4	NCKAP1	hsa-miR-142-3p	chr2:183789764-183789786
5	NCKAP1	hsa-miR-132-3p	chr2:183789715-183789736
6	NCKAP1	hsa-miR-132-3p	chr2:183790366-183790387

Variant related genes	Relation type
NCKAP1	TF binding region
ENSG00000061676	chromatin interactions
ENSG00000077232	chromatin interactions
ENSG00000221498	chromatin interactions

Extended variants
information (count: 1693 )
Associated
traits (count: 52 )

Variant overlapped rSNPs/rCNVs (count:1693 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4427983	chr2:183785598-183785599	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs200061446	chr2:183785615-183785616	Weak transcription Genic enhancers Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
3	rs76551540	chr2:183785617-183785618	Weak transcription Genic enhancers Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
4	rs398090915	chr2:183785627-183785628	Weak transcription Genic enhancers Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
5	rs576207444	chr2:183785668-183785669	Weak transcription Genic enhancers Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
6	rs7422554	chr2:183785678-183785679	Weak transcription Genic enhancers Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
7	rs542051544	chr2:183785687-183785688	Weak transcription Genic enhancers Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
8	rs78544526	chr2:183785692-183785693	Weak transcription Genic enhancers Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
9	rs184957220	chr2:183785713-183785714	Weak transcription Genic enhancers Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
10	rs541370611	chr2:183785720-183785721	Weak transcription Genic enhancers Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
11	rs189877637	chr2:183785730-183785731	Weak transcription Genic enhancers Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
12	rs10192715	chr2:183785769-183785770	Weak transcription Genic enhancers Strong transcription Enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs78389197	chr2:183785847-183785848	Weak transcription Strong transcription Enhancers Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
14	rs5836860	chr2:183785877-183785878	Weak transcription Strong transcription Enhancers Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
15	rs200307037	chr2:183785880-183785881	Weak transcription Strong transcription Enhancers Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
16	rs376974981	chr2:183785897-183785898	Weak transcription Strong transcription Enhancers Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
17	rs375033293	chr2:183785939-183785940	Weak transcription Strong transcription Enhancers Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
18	rs570198964	chr2:183785965-183785966	Weak transcription Strong transcription Enhancers Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
19	rs529091616	chr2:183786050-183786051	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
20	rs549248307	chr2:183786117-183786118	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
21	rs565742795	chr2:183786212-183786213	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
22	rs181935361	chr2:183786239-183786240	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
23	rs557780854	chr2:183786259-183786260	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
24	rs571192971	chr2:183786269-183786270	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
25	rs140911030	chr2:183786272-183786273	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
26	rs556621065	chr2:183786315-183786316	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
27	rs116784508	chr2:183786382-183786383	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
28	rs74564500	chr2:183786420-183786421	Weak transcription Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
29	rs555882516	chr2:183786489-183786490	Weak transcription Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
30	rs187017101	chr2:183786569-183786570	Weak transcription Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
31	rs191052988	chr2:183786571-183786572	Weak transcription Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
32	rs114421199	chr2:183786573-183786574	Weak transcription Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
33	rs567703314	chr2:183786627-183786628	Weak transcription Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
34	rs150225026	chr2:183786725-183786726	Weak transcription Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
35	rs138772247	chr2:183786726-183786727	Weak transcription Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
36	rs6735144	chr2:183786763-183786764	Weak transcription Strong transcription Enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs529362747	chr2:183786765-183786766	Weak transcription Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
38	rs533487659	chr2:183786789-183786790	Weak transcription Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
39	rs113774246	chr2:183786813-183786814	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
40	rs565831221	chr2:183786819-183786820	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
41	rs528295114	chr2:183786930-183786931	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
42	rs551629987	chr2:183786931-183786932	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
43	rs571484811	chr2:183786939-183786940	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
44	rs536640151	chr2:183786999-183787000	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
45	rs180822086	chr2:183787010-183787011	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
46	rs369702336	chr2:183787058-183787059	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
47	rs545315432	chr2:183787060-183787061	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
48	rs559100585	chr2:183787070-183787071	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
49	rs535805702	chr2:183787092-183787093	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
50	rs566925473	chr2:183787113-183787114	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a

Variant related diseases (count:52)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Ependymoma	16718352	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	18522746	CNVD
Melanoma	18172304	CNVD
Cancer	16751803	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Testicular germ cell tumor	18059402	CNVD
Breast cancer	16272173	CNVD
Ewing''s sarcoma	17952124	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Autism	16446308	CNVD
Autism	19401682	CNVD
Colorectal cancer	16272173	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Lung cancer	18438408	CNVD
Glioblastoma	21080181	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
small cell lung cancer	20016488	CNVD
Facial dysmorphism	20548289	CNVD
Mental retardation	20548289	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cancer	21183584	CNVD
Sudden cardiac death	19188705	CNVD
Autism	19329560	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1206 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:183757400-183797800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr2:183765200-183792800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr2:183765600-183805200	Weak transcription	Gastric	stomach
4	chr2:183768600-183811600	Weak transcription	Rectal Smooth Muscle	rectum
5	chr2:183769800-183811800	Weak transcription	Small Intestine	intestine
6	chr2:183770600-183786000	Weak transcription	Brain Substantia Nigra	brain
7	chr2:183770800-183787200	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr2:183772400-183791000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr2:183772400-183799200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr2:183772400-183811800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr2:183772800-183786200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr2:183773400-183866000	Weak transcription	Colonic Mucosa	Colon
13	chr2:183773400-183877800	Weak transcription	Stomach Mucosa	stomach
14	chr2:183773600-183793000	Weak transcription	Fetal Brain Male	brain
15	chr2:183775000-183787000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr2:183775600-183833000	Weak transcription	Pancreas	Pancrea
17	chr2:183776200-183786000	Weak transcription	Aorta	Aorta
18	chr2:183777800-183787200	Weak transcription	HepG2	liver
19	chr2:183778800-183786200	Weak transcription	Rectal Mucosa Donor 31	rectum
20	chr2:183779000-183792800	Weak transcription	H9 Cell Line	embryonic stem cell
21	chr2:183780000-183792800	Weak transcription	Psoas Muscle	Psoas
22	chr2:183780000-183807000	Weak transcription	Pancreatic Islets	Pancreatic Islet
23	chr2:183780400-183785600	Weak transcription	Brain Anterior Caudate	brain
24	chr2:183780400-183787400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr2:183780400-183788400	Weak transcription	Brain Angular Gyrus	brain
26	chr2:183780400-183788600	Weak transcription	Brain Cingulate Gyrus	brain
27	chr2:183780400-183790400	Weak transcription	Duodenum Smooth Muscle	Duodenum
28	chr2:183780400-183792400	Weak transcription	Brain Inferior Temporal Lobe	brain
29	chr2:183780400-183800800	Weak transcription	Colon Smooth Muscle	Colon
30	chr2:183780400-183874800	Weak transcription	Esophagus	oesophagus
31	chr2:183780600-183791000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
32	chr2:183780600-183792800	Weak transcription	Ovary	ovary
33	chr2:183780800-183786000	Weak transcription	H1 Cell Line	embryonic stem cell
34	chr2:183780800-183811200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
35	chr2:183781000-183787000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
36	chr2:183781000-183798200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
37	chr2:183781200-183786000	Weak transcription	NH-A	brain
38	chr2:183781200-183786200	Weak transcription	Placenta	Placenta
39	chr2:183781200-183788600	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr2:183781200-183789800	Weak transcription	Brain Hippocampus Middle	brain
41	chr2:183781200-183791000	Weak transcription	NHLF	lung
42	chr2:183781200-183798200	Weak transcription	Placenta Amnion	Placenta Amnion
43	chr2:183781200-183805800	Weak transcription	Fetal Heart	heart
44	chr2:183781400-183786200	Weak transcription	Adipose Nuclei	Adipose
45	chr2:183781400-183786200	Weak transcription	HSMMtube	muscle
46	chr2:183781400-183790800	Weak transcription	Skeletal Muscle Female	skeletal muscle
47	chr2:183781400-183792200	Weak transcription	Hela-S3	cervix
48	chr2:183781400-183793000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr2:183781800-183790400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr2:183782200-183795400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links