No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs2734564 |
chr12:10562612-10562613 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs371005154 |
chr12:10562622-10562623 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs17549004 |
chr12:10562623-10562624 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
4 |
rs2617173 |
chr12:10562627-10562628 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs34998700 |
chr12:10562629-10562630 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs34011543 |
chr12:10562633-10562634 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs2734563 |
chr12:10562653-10562654 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs571461951 |
chr12:10562667-10562668 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs3825295 |
chr12:10562675-10562676 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs17513979 |
chr12:10562679-10562680 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs201985743 |
chr12:10562682-10562683 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs3842297 |
chr12:10562683-10562684 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs546650900 |
chr12:10562695-10562696 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs146909581 |
chr12:10562701-10562702 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs183140628 |
chr12:10562702-10562703 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs139322793 |
chr12:10562762-10562763 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs560052195 |
chr12:10562776-10562777 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs2617174 |
chr12:10562798-10562799 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs17513965 |
chr12:10562802-10562803 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
20 |
rs564599207 |
chr12:10562814-10562815 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs554454670 |
chr12:10562821-10562822 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs188178328 |
chr12:10562827-10562828 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs2460732 |
chr12:10562842-10562843 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
24 |
rs2460733 |
chr12:10562876-10562877 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
25 |
rs192515322 |
chr12:10562974-10562975 |
Weak transcription Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs183751312 |
chr12:10563004-10563005 |
Weak transcription Transcr. at gene 5' and 3'
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs562557641 |
chr12:10563078-10563079 |
Weak transcription Transcr. at gene 5' and 3'
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs76404319 |
chr12:10563209-10563210 |
Weak transcription Transcr. at gene 5' and 3'
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs375805596 |
chr12:10563234-10563235 |
Weak transcription Transcr. at gene 5' and 3'
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs545075458 |
chr12:10563277-10563278 |
Weak transcription Transcr. at gene 5' and 3'
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs564894413 |
chr12:10563332-10563333 |
Weak transcription Transcr. at gene 5' and 3'
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs572243524 |
chr12:10563365-10563366 |
Weak transcription Transcr. at gene 5' and 3'
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs537013831 |
chr12:10563373-10563374 |
Weak transcription Transcr. at gene 5' and 3'
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs541122149 |
chr12:10563403-10563404 |
Weak transcription Transcr. at gene 5' and 3'
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs560773132 |
chr12:10563458-10563459 |
Weak transcription Transcr. at gene 5' and 3'
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs573973305 |
chr12:10563512-10563513 |
Weak transcription Transcr. at gene 5' and 3'
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs529857061 |
chr12:10563513-10563514 |
Weak transcription Transcr. at gene 5' and 3'
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs10772275 |
chr12:10563592-10563593 |
Weak transcription Transcr. at gene 5' and 3'
|
TF binding region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
39 |
rs548727827 |
chr12:10563637-10563638 |
Weak transcription Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs76233173 |
chr12:10563766-10563767 |
Weak transcription Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs367667624 |
chr12:10563767-10563768 |
Weak transcription Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs187939096 |
chr12:10563799-10563800 |
Weak transcription Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs371271742 |
chr12:10563803-10563804 |
Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs535338486 |
chr12:10563828-10563829 |
Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs116789954 |
chr12:10563947-10563948 |
Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs551927925 |
chr12:10564086-10564087 |
Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs2460734 |
chr12:10564114-10564115 |
Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
48 |
rs534738326 |
chr12:10564136-10564137 |
Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs113388815 |
chr12:10564164-10564165 |
Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs112330004 |
chr12:10564172-10564173 |
Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|