Variant report

Variant nsv1002305
Chromosome Location chr2:180568558-180812846
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:1127 , 50 per page) page: 1 2 3 4 5 6 7 ... 23
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:180540400-180571200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:180568000-180568600 Weak transcription HSMMtube muscle
3 chr2:180568000-180572200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr2:180568200-180569200 Weak transcription Liver Liver
5 chr2:180568600-180568800 Enhancers HSMMtube muscle
6 chr2:180569400-180569600 Enhancers Liver Liver
7 chr2:180571200-180571600 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr2:180571600-180577600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr2:180572200-180574400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr2:180572400-180572600 Enhancers Lung lung
11 chr2:180572400-180572600 Enhancers Right Atrium heart
12 chr2:180572600-180574600 Weak transcription Lung lung
13 chr2:180572600-180582200 Weak transcription Right Atrium heart
14 chr2:180572800-180573000 Enhancers Gastric stomach
15 chr2:180573000-180576000 Weak transcription Gastric stomach
16 chr2:180573200-180576800 Enhancers Placenta Amnion Placenta Amnion
17 chr2:180573600-180574000 Enhancers iPS-15b Cell Line embryonic stem cell
18 chr2:180573800-180574200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
19 chr2:180574000-180576400 Weak transcription Stomach Smooth Muscle stomach
20 chr2:180574600-180575200 ZNF genes & repeats Lung lung
21 chr2:180575200-180576000 Enhancers Placenta Placenta
22 chr2:180575400-180576400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr2:180575600-180576000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr2:180575600-180576000 Enhancers NHEK skin
25 chr2:180575800-180576200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr2:180576000-180576800 Enhancers HSMMtube muscle
27 chr2:180580600-180581600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr2:180581400-180582200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr2:180582200-180582400 Enhancers Right Atrium heart
30 chr2:180582400-180585600 Weak transcription Right Atrium heart
31 chr2:180583800-180584400 Enhancers H9 Cell Line embryonic stem cell
32 chr2:180584000-180584200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr2:180584000-180584200 Enhancers HepG2 liver
34 chr2:180585600-180585800 Enhancers Right Atrium heart
35 chr2:180591000-180591800 Enhancers Placenta Amnion Placenta Amnion
36 chr2:180594800-180595400 Enhancers Liver Liver
37 chr2:180604200-180608600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr2:180604800-180607000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr2:180607000-180607400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr2:180607400-180607600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr2:180607600-180610000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr2:180608600-180608800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
43 chr2:180608600-180611200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr2:180608800-180610800 Active TSS Right Atrium heart
45 chr2:180608800-180613000 Enhancers Fetal Lung lung
46 chr2:180609600-180611000 Active TSS Brain Inferior Temporal Lobe brain
47 chr2:180610000-180610200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr2:180610000-180610200 Enhancers Brain Angular Gyrus brain
49 chr2:180610000-180610400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
50 chr2:180610200-180610800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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