Variant report

Variant	nsv1006015
Chromosome Location	chr3:162626560-163159978
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1399)
CpG islands
(count:305)
Chromatin interactive
region (count:53)
LncRNA
region (count:72)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1399 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:163005669-163005678	K562	blood:	n/a	n/a
2	BACH1	chr3:162650431-162650615	H1-hESC	embryonic stem cell:	n/a	n/a
3	BCL11A	chr3:163035507-163035684	GM12878	blood:	n/a	n/a
4	BRCA1	chr3:162774855-162774871	HepG2	liver:	n/a	n/a
5	BRCA1	chr3:162774683-162774995	Hela-S3	cervix:	n/a	n/a
6	BRCA1	chr3:162717002-162717061	Hela-S3	cervix:	n/a	n/a
7	CBX3	chr3:163053325-163053544	K562	blood:	n/a	n/a
8	CBX3	chr3:163024140-163024571	HCT-116	colon:	n/a	n/a
9	CBX3	chr3:163053313-163053625	K562	blood:	n/a	n/a
10	CCNT2	chr3:163113728-163113917	K562	blood:	n/a	n/a
11	CEBPB	chr3:162774590-162774941	A549	lung:	n/a	n/a
12	CEBPB	chr3:162729383-162729666	H1-hESC	embryonic stem cell:	n/a	n/a
13	CEBPB	chr3:162789480-162789977	Hela-S3	cervix:	n/a	n/a
14	CEBPB	chr3:163097193-163097391	A549	lung:	n/a	chr3:163097277-163097288
15	CEBPB	chr3:163156603-163156994	MCF-7	breast:	n/a	n/a
16	CEBPB	chr3:162893798-162893837	H1-hESC	embryonic stem cell:	n/a	n/a
17	CEBPB	chr3:163004771-163005007	HepG2	liver:	n/a	chr3:163004841-163004852 chr3:163004841-163004850 chr3:163004841-163004850 chr3:163004839-163004852 chr3:163004841-163004850 chr3:163004841-163004850 chr3:163004839-163004852 chr3:163004839-163004852 chr3:163004839-163004850
18	CEBPB	chr3:162897199-162897419	A549	lung:	n/a	n/a
19	CEBPB	chr3:163156621-163156876	HepG2	liver:	n/a	n/a
20	CEBPB	chr3:162695972-162696288	IMR90	lung:	n/a	chr3:162696130-162696139 chr3:162696130-162696139 chr3:162696130-162696139
21	CEBPB	chr3:162978995-162979027	K562	blood:	n/a	n/a
22	CEBPB	chr3:162628256-162628557	HepG2	liver:	n/a	chr3:162628401-162628412
23	CEBPB	chr3:162729220-162729874	MCF-7	breast:	n/a	n/a
24	CEBPB	chr3:162815267-162815649	MCF-7	breast:	n/a	chr3:162815435-162815446
25	CEBPB	chr3:162628264-162628508	A549	lung:	n/a	chr3:162628401-162628412
26	CEBPB	chr3:162774587-162774998	MCF-7	breast:	n/a	n/a
27	CEBPB	chr3:162774594-162775003	Hela-S3	cervix:	n/a	n/a
28	CEBPB	chr3:162628262-162628535	IMR90	lung:	n/a	chr3:162628401-162628412
29	CEBPB	chr3:162929413-162929748	A549	lung:	n/a	chr3:162929588-162929605 chr3:162929590-162929601 chr3:162929560-162929571 chr3:162929562-162929573
30	CEBPB	chr3:162773968-162774176	HepG2	liver:	n/a	chr3:162774022-162774033
31	CEBPB	chr3:163097132-163097429	HepG2	liver:	n/a	chr3:163097277-163097288
32	CEBPB	chr3:163135983-163136113	H1-hESC	embryonic stem cell:	n/a	chr3:163135991-163136002 chr3:163135992-163136001 chr3:163135992-163136001
33	CEBPB	chr3:162815303-162815572	A549	lung:	n/a	chr3:162815435-162815446
34	CEBPB	chr3:163097121-163097403	K562	blood:	n/a	chr3:163097277-163097288
35	CEBPB	chr3:162815287-162815558	IMR90	lung:	n/a	chr3:162815435-162815446
36	CEBPB	chr3:163004712-163004916	K562	blood:	n/a	chr3:163004841-163004852 chr3:163004841-163004850 chr3:163004841-163004850 chr3:163004839-163004852 chr3:163004841-163004850 chr3:163004841-163004850 chr3:163004839-163004852 chr3:163004839-163004852 chr3:163004839-163004850
37	CEBPB	chr3:162856075-162856324	MCF-7	breast:	n/a	n/a
38	CEBPB	chr3:162695952-162696294	A549	lung:	n/a	chr3:162696130-162696139 chr3:162696130-162696139 chr3:162696130-162696139
39	CEBPB	chr3:162729092-162729733	Hela-S3	cervix:	n/a	n/a
40	CEBPB	chr3:162929417-162929749	K562	blood:	n/a	chr3:162929588-162929605 chr3:162929590-162929601 chr3:162929560-162929571 chr3:162929562-162929573
41	CEBPB	chr3:162929409-162929718	IMR90	lung:	n/a	chr3:162929588-162929605 chr3:162929590-162929601 chr3:162929560-162929571 chr3:162929562-162929573
42	CEBPB	chr3:162929418-162929759	HepG2	liver:	n/a	chr3:162929588-162929605 chr3:162929590-162929601 chr3:162929560-162929571 chr3:162929562-162929573
43	CEBPB	chr3:162815262-162815596	HepG2	liver:	n/a	chr3:162815435-162815446
44	CEBPB	chr3:162695964-162696261	HepG2	liver:	n/a	chr3:162696130-162696139 chr3:162696130-162696139 chr3:162696130-162696139
45	CEBPB	chr3:162929432-162929720	Hela-S3	cervix:	n/a	chr3:162929588-162929605 chr3:162929590-162929601 chr3:162929560-162929571 chr3:162929562-162929573
46	CEBPB	chr3:162711790-162712125	HepG2	liver:	n/a	chr3:162711927-162711938
47	CEBPB	chr3:163156613-163156901	A549	lung:	n/a	n/a
48	CEBPB	chr3:163156609-163156913	Hela-S3	cervix:	n/a	n/a
49	CEBPB	chr3:162932353-162932482	K562	blood:	n/a	n/a
50	CEBPB	chr3:162682187-162682344	K562	blood:	n/a	chr3:162682288-162682299

(count:305 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:162705203-162705253	BE2_C	brain:	n/a
2	chr3:162705203-162705253	SK-N-SH	brain:	n/a
3	chr3:162705427-162705477	ECC-1	luminal epithelium:	n/a
4	chr3:162653787-162653837	K562	blood:	n/a
5	chr3:162653787-162653837	BE2_C	brain:	n/a
6	chr3:162653787-162653837	H1-hESC	embryonic stem cell:	embryo
7	chr3:162705203-162705253	Hepatocyte	liver:	n/a
8	chr3:162653787-162653837	HRCEpiC	kidney:	n/a
9	chr3:162705427-162705477	ovcar-3	ovarian:	n/a
10	chr3:162705337-162705387	Jurkat	blood:	n/a
11	chr3:162705203-162705253	HCF	heart:	n/a
12	chr3:162653787-162653837	HepG2	liver:	n/a
13	chr3:162705203-162705253	MCF-7	breast:	n/a
14	chr3:162705203-162705253	HUVEC	blood vessel:	n/a
15	chr3:162705203-162705253	GM06990	blood:	n/a
16	chr3:162705337-162705387	HMEC	breast:	n/a
17	chr3:162705203-162705253	Jurkat	blood:	n/a
18	chr3:162705337-162705387	GM12891	blood:	n/a
19	chr3:162705203-162705253	NHBE	bronchial:	n/a
20	chr3:162705427-162705477	PFSK-1	brain:	n/a
21	chr3:162705203-162705253	HL-60	blood:	n/a
22	chr3:162705203-162705253	GM12878	blood:	n/a
23	chr3:162653787-162653837	HEEpiC	esophagus:	n/a
24	chr3:162705337-162705387	HNPCEpiC	eye:	n/a
25	chr3:162705337-162705387	PrEC	prostate:	n/a
26	chr3:162653787-162653837	HCPEpiC	choroid plexus:	n/a
27	chr3:162705427-162705477	RPTEC	kidney:	n/a
28	chr3:162705337-162705387	Hepatocyte	liver:	n/a
29	chr3:162705337-162705387	HAEpiC	amniotic membrane:	n/a
30	chr3:162705203-162705253	Hela-S3	cervix:	n/a
31	chr3:162653787-162653837	MCF10A-Er-Src	breast:	n/a
32	chr3:162705337-162705387	AG04450	lung:	fetal
33	chr3:162705337-162705387	NH-A	brain:	n/a
34	chr3:162705337-162705387	SK-N-SH_RA	brain:	n/a
35	chr3:163021378-163021428	T-47D	breast:	n/a
36	chr3:162653787-162653837	U87	brain:	n/a
37	chr3:162653787-162653837	PFSK-1	brain:	n/a
38	chr3:162705427-162705477	BE2_C	brain:	n/a
39	chr3:162705337-162705387	HEEpiC	esophagus:	n/a
40	chr3:162653787-162653837	Caco-2	colon:	n/a
41	chr3:162705337-162705387	HCF	heart:	n/a
42	chr3:163021378-163021428	HMEC	breast:	n/a
43	chr3:163021378-163021428	U87	brain:	n/a
44	chr3:162705337-162705387	T-47D	breast:	n/a
45	chr3:163021378-163021428	HEEpiC	esophagus:	n/a
46	chr3:162705203-162705253	HepG2	liver:	n/a
47	chr3:162653787-162653837	ovcar-3	ovarian:	n/a
48	chr3:162705203-162705253	GM12891	blood:	n/a
49	chr3:162705427-162705477	GM12892	blood:	n/a
50	chr3:162705337-162705387	HCT-116	colon:	n/a

(count:53 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr3:162730866..162732605-chr3:162732763..162734314,2	MCF-7	breast:
2	chr3:162468849..162471720-chr3:162897232..162899564,2	K562	blood:
3	chr3:163099881..163101461-chr3:163102597..163105467,2	K562	blood:
4	chr3:162754967..162757825-chr3:162758379..162760616,2	MCF-7	breast:
5	chr20:11421691..11422663-chr3:162694553..162695419,2	MCF-7	breast:
6	chr3:162774576..162775267-chr3:162991199..162992106,3	MCF-7	breast:
7	chr3:163105916..163108059-chr3:163125965..163128652,2	K562	blood:
8	chr3:162755966..162757761-chr3:162760804..162762764,2	MCF-7	breast:
9	chr3:162692633..162695202-chr3:162700914..162703834,2	MCF-7	breast:
10	chr3:163121369..163123913-chr3:163134434..163136619,2	K562	blood:
11	chr14:60627662..60628534-chr3:162740219..162740719,2	MCF-7	breast:
12	chr2:174218936..174220527-chr3:162835384..162836884,2	K562	blood:
13	chr3:163029844..163032021-chr3:163043055..163045557,2	K562	blood:
14	chr3:163093927..163096694-chr3:163097446..163100303,3	K562	blood:
15	chr3:156892021..156894345-chr3:162787273..162789725,2	MCF-7	breast:
16	chr3:162730866..162732605-chr3:162732763..162734314,2	MCF-7	breast:
17	chr3:162627188..162629037-chr3:162630724..162633448,2	MCF-7	breast:
18	chr3:162821263..162822976-chr3:162826872..162828945,2	MCF-7	breast:
19	chr3:162754967..162757825-chr3:162758379..162760616,2	MCF-7	breast:
20	chr3:162965564..162967593-chr3:162971986..162973917,2	K562	blood:
21	chr3:162774415..162775478-chr3:163207241..163208645,5	MCF-7	breast:
22	chr3:162774576..162775267-chr3:162991199..162992106,3	MCF-7	breast:
23	chr3:162781747..162783965-chr3:162788037..162790015,2	MCF-7	breast:
24	chr3:163153075..163155845-chr3:163158514..163160684,2	K562	blood:
25	chr3:162776529..162777484-chr3:163340191..163340771,2	MCF-7	breast:
26	chr3:162755966..162757761-chr3:162760804..162762764,2	MCF-7	breast:
27	chr3:163090274..163091850-chr3:163098856..163100455,2	K562	blood:
28	chr3:162627188..162629037-chr3:162630724..162633448,2	MCF-7	breast:
29	chr3:163011480..163014323-chr3:163020834..163023758,2	MCF-7	breast:
30	chr3:163093927..163096694-chr3:163097446..163100303,3	K562	blood:
31	chr10:69265595..69266499-chr3:162973315..162973821,2	MCF-7	breast:
32	chr3:162924888..162927929-chr3:162929573..162933579,3	K562	blood:
33	chr16:17545591..17546532-chr3:163096602..163097414,2	MCF-7	breast:
34	chr3:163090274..163091850-chr3:163098856..163100455,2	K562	blood:
35	chr3:163099881..163101461-chr3:163102597..163105467,2	K562	blood:
36	chr3:163105916..163108059-chr3:163125965..163128652,2	K562	blood:
37	chr3:163029844..163032021-chr3:163043055..163045557,2	K562	blood:
38	chr3:162695238..162696118-chr5:168564460..168564967,2	MCF-7	breast:
39	chr3:162003324..162004086-chr3:162760294..162761113,2	MCF-7	breast:
40	chr3:162924888..162927929-chr3:162929573..162933579,3	K562	blood:
41	chr3:163056333..163058966-chr3:163059531..163061180,3	K562	blood:
42	chr3:162494680..162495563-chr3:162760633..162761552,3	MCF-7	breast:
43	chr3:162965564..162967593-chr3:162971986..162973917,2	K562	blood:
44	chr3:162692633..162695202-chr3:162700914..162703834,2	MCF-7	breast:
45	chr3:162829065..162831690-chr3:162831998..162834078,2	MCF-7	breast:
46	chr3:163121369..163123913-chr3:163134434..163136619,2	K562	blood:
47	chr3:162781747..162783965-chr3:162788037..162790015,2	MCF-7	breast:
48	chr3:163098893..163101155-chr3:163335067..163337245,2	K562	blood:
49	chr3:162622047..162623612-chr3:162639605..162642211,2	K562	blood:
50	chr3:162821263..162822976-chr3:162826872..162828945,2	MCF-7	breast:

(count:72 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SI-4	chr3:162937889-162937975	ENSG00000241369
2	lnc-SI-4	chr3:162919326-162919405	ENSG00000241369
3	lnc-OTOL1-2	chr3:162925763-162925882	NONHSAT093026
4	lnc-SI-4	chr3:162900619-162900716	ENSG00000241369
5	lnc-SI-4	chr3:162992984-162993107	ENSG00000241369
6	lnc-SI-4	chr3:162936848-162936965	ENSG00000241369
7	lnc-SI-4	chr3:162967053-162967162	ENSG00000241369
8	lnc-SI-4	chr3:162895031-162895889	ENSG00000241369
9	lnc-OTOL1-9	chr3:162833217-162833974	NONHSAT093027
10	lnc-OTOL1-2	chr3:162744184-162744286	NONHSAT093026
11	lnc-SI-4	chr3:163021026-163021103	ENSG00000241369
12	lnc-SI-4	chr3:162919326-162919405	ENSG00000241369
13	lnc-SI-4	chr3:162937889-162937975	ENSG00000241369
14	lnc-SI-4	chr3:162996298-162996361	ENSG00000241369
15	lnc-SI-4	chr3:162919871-162920037	NONHSAT093037
16	lnc-SI-4	chr3:162996298-162996391	ENSG00000241369
17	lnc-SI-4	chr3:162937889-162937975	ENSG00000241369
18	lnc-SI-4	chr3:162917363-162917542	ENSG00000241369
19	lnc-SI-4	chr3:162895689-162895889	ENSG00000241369
20	lnc-SI-4	chr3:162905018-162905052	NONHSAT093031
21	lnc-SI-4	chr3:162937889-162937975	ENSG00000241369
22	lnc-SI-4	chr3:162917662-162917739	ENSG00000241369
23	lnc-SI-4	chr3:163054933-163055024	ENSG00000241369
24	lnc-SI-4	chr3:162996298-162996391	ENSG00000241369
25	lnc-OTOL1-2	chr3:162937866-162937980	NONHSAT093026
26	lnc-SI-4	chr3:162917662-162917739	ENSG00000241369
27	lnc-SI-4	chr3:162919870-162920037	ENSG00000241369
28	lnc-SI-4	chr3:162996298-162996391	ENSG00000241369
29	lnc-SI-4	chr3:162917416-162917542	NONHSAT093031
30	lnc-SI-4	chr3:162917662-162917719	NONHSAT093031
31	lnc-SI-4	chr3:162919326-162919405	ENSG00000241369
32	lnc-SI-4	chr3:162904856-162905052	ENSG00000241369
33	lnc-OTOL1-2	chr3:162631870-162632022	NONHSAT093026
34	lnc-OTOL1-2	chr3:162946486-162946540	NONHSAT093026
35	lnc-SI-4	chr3:162917416-162917542	ENSG00000241369
36	lnc-SI-4	chr3:163021026-163021105	ENSG00000241369
37	lnc-SI-4	chr3:162917662-162917739	ENSG00000241369
38	lnc-SI-4	chr3:162919326-162919405	ENSG00000241369
39	lnc-SI-4	chr3:162937889-162937929	ENSG00000241369
40	lnc-OTOL1-2	chr3:162925763-162925882	ENSG00000241168.1
41	lnc-SI-4	chr3:162925431-162925545	ENSG00000241369
42	lnc-OTOL1-2	chr3:162744184-162744286	ENSG00000241168.1
43	lnc-OTOL1-10	chr3:163021583-163022065	NONHSAT093040
44	lnc-OTOL1-2	chr3:162948497-162949937	ENSG00000241168.1
45	lnc-OTOL1-2	chr3:162946486-162946540	ENSG00000241168.1
46	lnc-SI-4	chr3:162996298-162996391	ENSG00000241369
47	lnc-OTOL1-2	chr3:162937866-162937980	ENSG00000241168.1
48	lnc-SI-4	chr3:162992984-162993107	ENSG00000241369
49	lnc-SI-4	chr3:162996298-162996391	ENSG00000241369
50	lnc-OTOL1-2	chr3:162948497-162949934	NONHSAT093026

No data

Variant related genes	Relation type
ENSG00000244571	TF binding region
ENSG00000241168	TF binding region
CT64	TF binding region
ENSG00000238398	TF binding region
ENSG00000244571	CpG island
ENSG00000241168	CpG island
CT64	CpG island
ENSG00000238398	CpG island
ENSG00000243176	chromatin interactions
ENSG00000241369	chromatin interactions
ENSG00000244571	chromatin interactions
ENSG00000144354	chromatin interactions

Extended variants
information (count: 6935 )
Associated
traits (count: 65 )

Variant overlapped rSNPs/rCNVs (count:6935 , 50 per page) page: 1 2 3 4 5 6 7 ... 139

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs530820592	chr3:162630219-162630220	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs550561605	chr3:162630226-162630227	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs6785676	chr3:162630290-162630291	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs532954188	chr3:162630294-162630295	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs549351945	chr3:162630305-162630306	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs206869	chr3:162630315-162630316	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs536086380	chr3:162630344-162630345	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs150389119	chr3:162630384-162630385	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs549621550	chr3:162630410-162630411	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs138678253	chr3:162630411-162630412	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs538531731	chr3:162630423-162630424	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs80140993	chr3:162630444-162630445	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs577998899	chr3:162630453-162630454	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs73019598	chr3:162630462-162630463	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs567796430	chr3:162630485-162630486	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs553876023	chr3:162630515-162630516	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs570724370	chr3:162630532-162630533	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs147009435	chr3:162630533-162630534	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs200695768	chr3:162630575-162630576	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs116623487	chr3:162630577-162630578	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs542678604	chr3:162630606-162630607	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs66649820	chr3:162630677-162630678	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs538805210	chr3:162630696-162630697	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs557220189	chr3:162630706-162630707	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs34750600	chr3:162630716-162630717	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs575300029	chr3:162630718-162630719	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs140472001	chr3:162630754-162630755	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs199664793	chr3:162630755-162630756	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs542595517	chr3:162630844-162630845	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs544541999	chr3:162630883-162630884	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs564218153	chr3:162630973-162630974	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs532994781	chr3:162630987-162630988	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs546599399	chr3:162631014-162631015	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs73019601	chr3:162631028-162631029	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs150626484	chr3:162631035-162631036	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs529006000	chr3:162631065-162631066	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs141966779	chr3:162631071-162631072	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs569479128	chr3:162631095-162631096	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs531799832	chr3:162631101-162631102	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs146322526	chr3:162631103-162631104	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs139636236	chr3:162631110-162631111	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs534193286	chr3:162631195-162631196	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs553763628	chr3:162631275-162631276	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs73021303	chr3:162631313-162631314	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs373401088	chr3:162631324-162631325	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs186510470	chr3:162631344-162631345	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs369660866	chr3:162631346-162631347	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs77822758	chr3:162631353-162631354	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs199864784	chr3:162631354-162631355	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs144714141	chr3:162631355-162631356	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:65)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	22032731	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Basal cell lymphoma	21115979	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myelodysplastic syndrome	21251322	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	16608533	CNVD
Acute myeloid leukemia	20729466	CNVD
Non-small cell lung cancer	19010865	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	16547154	CNVD
Breast cancer	21364760	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	21785460	CNVD
Sudden cardiac death	19188705	CNVD
Mantle cell lymphoma	19029149	CNVD
Malformation	19546859	CNVD
Schizophrenia	19546859	CNVD
Breast cancer	17133270	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Attention deficit hyperactivity disorder	21324949	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
epilepsy	18472482	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Myxofibrosarcoma	16751306	CNVD
Parkinson disease	21907011	CNVD
Bladder cancer	21909424	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Glioblastoma multiforme	21138945	CNVD

Chromatin state (count:185 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:162630200-162634000	Weak transcription	HUES6 Cell Line	embryonic stem cell
2	chr3:162634000-162634400	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
3	chr3:162634400-162662200	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr3:162636200-162653200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr3:162646800-162647200	Enhancers	Fetal Lung	lung
6	chr3:162647200-162647600	Weak transcription	Fetal Lung	lung
7	chr3:162647600-162648400	Enhancers	Fetal Lung	lung
8	chr3:162648200-162648400	Enhancers	Aorta	Aorta
9	chr3:162648400-162650400	Weak transcription	Fetal Lung	lung
10	chr3:162648400-162662400	Weak transcription	Aorta	Aorta
11	chr3:162650400-162651200	Enhancers	Fetal Lung	lung
12	chr3:162651200-162655400	Weak transcription	Fetal Lung	lung
13	chr3:162653200-162654400	Enhancers	ES-I3 Cell Line	embryonic stem cell
14	chr3:162653800-162655000	Enhancers	HUES48 Cell Line	embryonic stem cell
15	chr3:162654000-162655800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr3:162654200-162654800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr3:162654200-162655400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr3:162654400-162654800	Enhancers	HUES64 Cell Line	embryonic stem cell
19	chr3:162654400-162665200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
20	chr3:162654600-162654800	Enhancers	iPS-15b Cell Line	embryonic stem cell
21	chr3:162654800-162655400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
22	chr3:162654800-162655800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr3:162655400-162655600	Enhancers	iPS-15b Cell Line	embryonic stem cell
24	chr3:162655400-162656000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr3:162655400-162656200	Enhancers	Fetal Lung	lung
26	chr3:162656000-162656200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr3:162656000-162656200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr3:162661600-162662000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr3:162662000-162663200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr3:162662200-162663600	Strong transcription	HUES6 Cell Line	embryonic stem cell
31	chr3:162662400-162662800	ZNF genes & repeats	Aorta	Aorta
32	chr3:162662400-162663200	Enhancers	Placenta Amnion	Placenta Amnion
33	chr3:162662800-162664600	Weak transcription	Aorta	Aorta
34	chr3:162663600-162665400	Weak transcription	HUES6 Cell Line	embryonic stem cell
35	chr3:162664600-162664800	ZNF genes & repeats	Aorta	Aorta
36	chr3:162665200-162665800	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
37	chr3:162665400-162666000	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
38	chr3:162665600-162665800	ZNF genes & repeats	Aorta	Aorta
39	chr3:162666000-162666800	Weak transcription	HUES6 Cell Line	embryonic stem cell
40	chr3:162674800-162675200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
41	chr3:162676400-162681800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
42	chr3:162681800-162682400	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
43	chr3:162683800-162684200	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
44	chr3:162683800-162684400	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
45	chr3:162690200-162692200	Enhancers	Dnd41	blood
46	chr3:162691200-162691800	Enhancers	A549	lung
47	chr3:162691800-162695400	Weak transcription	A549	lung
48	chr3:162695400-162696200	Enhancers	A549	lung
49	chr3:162702200-162702600	Enhancers	ES-I3 Cell Line	embryonic stem cell
50	chr3:162702400-162702600	Enhancers	HUES6 Cell Line	embryonic stem cell

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