Variant report

Variant	nsv1006745
Chromosome Location	chr4:47935250-48052824
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1736)
CpG islands
(count:1284)
Chromatin interactive
region (count:39)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1736 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:48034689-48035145	HepG2	liver:	n/a	n/a
2	ARID3A	chr4:47935901-47936162	K562	blood:	n/a	n/a
3	ARID3A	chr4:48044841-48045572	HepG2	liver:	n/a	n/a
4	ARID3A	chr4:47935812-47936158	HepG2	liver:	n/a	n/a
5	ARID3A	chr4:48040697-48041085	HepG2	liver:	n/a	n/a
6	ARID3A	chr4:48018132-48018188	HepG2	liver:	n/a	n/a
7	ATF2	chr4:48051950-48052330	GM12878	blood:	n/a	n/a
8	ATF2	chr4:48029687-48030248	GM12878	blood:	n/a	n/a
9	ATF2	chr4:48018278-48019455	GM12878	blood:	n/a	chr4:48019284-48019295
10	ATF2	chr4:48044875-48045488	GM12878	blood:	n/a	n/a
11	ATF2	chr4:48030485-48031348	GM12878	blood:	n/a	n/a
12	ATF2	chr4:48029541-48030171	GM12878	blood:	n/a	n/a
13	ATF2	chr4:48049147-48049934	GM12878	blood:	n/a	n/a
14	ATF2	chr4:48046241-48046996	GM12878	blood:	n/a	n/a
15	ATF2	chr4:48044518-48045592	GM12878	blood:	n/a	n/a
16	ATF2	chr4:48030541-48031481	GM12878	blood:	n/a	n/a
17	ATF2	chr4:48048044-48048604	GM12878	blood:	n/a	n/a
18	ATF2	chr4:48037965-48039344	GM12878	blood:	n/a	n/a
19	ATF2	chr4:48038237-48039382	GM12878	blood:	n/a	n/a
20	ATF2	chr4:48049171-48050094	GM12878	blood:	n/a	n/a
21	BACH1	chr4:48018370-48019458	H1-hESC	embryonic stem cell:	n/a	n/a
22	BACH1	chr4:47970905-47970974	K562	blood:	n/a	n/a
23	BATF	chr4:48049256-48050339	GM12878	blood:	n/a	chr4:48049901-48049910
24	BATF	chr4:48031145-48031468	GM12878	blood:	n/a	chr4:48031328-48031339
25	BATF	chr4:48005709-48005916	GM12878	blood:	n/a	n/a
26	BATF	chr4:48029709-48030025	GM12878	blood:	n/a	n/a
27	BATF	chr4:48038297-48039126	GM12878	blood:	n/a	n/a
28	BATF	chr4:48049350-48049759	GM12878	blood:	n/a	n/a
29	BATF	chr4:48038389-48038796	GM12878	blood:	n/a	n/a
30	BATF	chr4:48043667-48044170	GM12878	blood:	n/a	n/a
31	BATF	chr4:48029739-48030044	GM12878	blood:	n/a	n/a
32	BATF	chr4:48044969-48045278	GM12878	blood:	n/a	n/a
33	BATF	chr4:48043709-48044075	GM12878	blood:	n/a	n/a
34	BATF	chr4:48030707-48031086	GM12878	blood:	n/a	n/a
35	BATF	chr4:48048087-48048455	GM12878	blood:	n/a	n/a
36	BCL11A	chr4:48038779-48039111	GM12878	blood:	n/a	n/a
37	BCL11A	chr4:48029746-48029929	GM12878	blood:	n/a	n/a
38	BCL11A	chr4:48035934-48036230	GM12878	blood:	n/a	n/a
39	BCL11A	chr4:48049279-48049807	GM12878	blood:	n/a	chr4:48049520-48049529
40	BCL11A	chr4:48048035-48048499	GM12878	blood:	n/a	n/a
41	BCL11A	chr4:48029705-48030076	GM12878	blood:	n/a	n/a
42	BCL11A	chr4:48049330-48049710	GM12878	blood:	n/a	chr4:48049520-48049529
43	BCL11A	chr4:48038270-48039189	GM12878	blood:	n/a	n/a
44	BCL11A	chr4:48030703-48031056	GM12878	blood:	n/a	n/a
45	BCL3	chr4:48038362-48039193	GM12878	blood:	n/a	n/a
46	BCL3	chr4:48049233-48049813	GM12878	blood:	n/a	chr4:48049520-48049529
47	BCL3	chr4:48049332-48049775	GM12878	blood:	n/a	chr4:48049520-48049529
48	BCLAF1	chr4:48038208-48039230	GM12878	blood:	n/a	n/a
49	BCLAF1	chr4:48049213-48049873	GM12878	blood:	n/a	chr4:48049520-48049529
50	BCLAF1	chr4:48044865-48045456	GM12878	blood:	n/a	chr4:48045028-48045037

(count:1284 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:47955755-47955805	U87	brain:	n/a
2	chr4:47983620-47983670	NT2-D1	testis:	n/a
3	chr4:47938433-47938483	SK-N-SH	brain:	n/a
4	chr4:47955755-47955805	U87	brain:	n/a
5	chr4:47983620-47983670	NT2-D1	testis:	n/a
6	chr4:47938433-47938483	SK-N-SH	brain:	n/a
7	chr4:48019347-48019397	CMK	blood:	n/a
8	chr4:48018695-48018745	HepG2	liver:	n/a
9	chr4:47983620-47983670	PANC-1	pancreas:	n/a
10	chr4:47956011-47956061	HRE	kidney:	n/a
11	chr4:48015981-48016031	ovcar-3	ovarian:	n/a
12	chr4:48018954-48019004	Jurkat	blood:	n/a
13	chr4:47984394-47984444	AG04449	skin:	fetal
14	chr4:47983620-47983670	SK-N-MC	brain:	n/a
15	chr4:48019347-48019397	PFSK-1	brain:	n/a
16	chr4:47983620-47983670	NH-A	brain:	n/a
17	chr4:48018755-48018805	AG09309	skin:	n/a
18	chr4:48015490-48015540	NB4	blood:	n/a
19	chr4:47983620-47983670	Caco-2	colon:	n/a
20	chr4:48018631-48018681	BJ	skin:	n/a
21	chr4:48018662-48018712	AG04449	skin:	fetal
22	chr4:48022241-48022291	T-47D	breast:	n/a
23	chr4:47955755-47955805	AG09309	skin:	n/a
24	chr4:47938433-47938483	GM12892	blood:	n/a
25	chr4:47983620-47983670	SK-N-SH_RA	brain:	n/a
26	chr4:48045040-48045090	SK-N-SH	brain:	n/a
27	chr4:48015981-48016031	SAEC	small airway:	n/a
28	chr4:48015490-48015540	ProgFib	skin:	n/a
29	chr4:48018582-48018632	LNCaP	prostate:	n/a
30	chr4:48018954-48019004	NHDF-neo	bronchial:	n/a
31	chr4:47938433-47938483	GM19239	blood:	n/a
32	chr4:47955755-47955805	AG09319	gingival:	n/a
33	chr4:48018954-48019004	ovcar-3	ovarian:	n/a
34	chr4:48018755-48018805	NH-A	brain:	n/a
35	chr4:48019555-48019605	HPAEpiC	pulmonary alveolar:	n/a
36	chr4:48018755-48018805	HUVEC	blood vessel:	n/a
37	chr4:47938433-47938483	Hela-S3	cervix:	n/a
38	chr4:47955755-47955805	AG10803	skin:	n/a
39	chr4:47984394-47984444	AG04450	lung:	fetal
40	chr4:48018954-48019004	AoSMC	blood vessel:	n/a
41	chr4:48015490-48015540	PFSK-1	brain:	n/a
42	chr4:48045040-48045090	HCT-116	colon:	n/a
43	chr4:48018755-48018805	GM12878	blood:	n/a
44	chr4:48018954-48019004	HEEpiC	esophagus:	n/a
45	chr4:48018582-48018632	T-47D	breast:	n/a
46	chr4:48045040-48045090	RPTEC	kidney:	n/a
47	chr4:47982821-47982871	HMEC	breast:	n/a
48	chr4:47956011-47956061	AG09319	gingival:	n/a
49	chr4:48022241-48022291	MCF10A-Er-Src	breast:	n/a
50	chr4:47982821-47982871	HIPEpiC	eye:	n/a

(count:39 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:48015687..48018286-chr4:48032689..48034980,2	K562	blood:
2	chr4:48015687..48018286-chr4:48032689..48034980,2	K562	blood:
3	chr4:48017249..48021049-chr4:48030612..48033189,3	MCF-7	breast:
4	chr4:48018543..48020121-chr4:48043793..48046506,2	MCF-7	breast:
5	chr4:48017908..48020404-chr4:48035572..48037136,2	MCF-7	breast:
6	chr4:48040732..48041255-chr4:48049418..48050146,2	MCF-7	breast:
7	chr4:47935498..47936416-chr4:48089283..48089860,2	MCF-7	breast:
8	chr4:48019513..48022096-chr4:48074921..48077158,2	MCF-7	breast:
9	chr4:48021540..48023440-chr4:48027193..48032829,5	MCF-7	breast:
10	chr4:48035341..48036908-chr4:48088867..48089881,5	MCF-7	breast:
11	chr4:47945827..47947880-chr4:47948710..47950331,2	K562	blood:
12	chr4:47942692..47945370-chr4:47945557..47947675,2	K562	blood:
13	chr4:48029512..48031453-chr4:48088999..48090541,2	K562	blood:
14	chr4:47915045..47916605-chr4:48017433..48018940,2	MCF-7	breast:
15	chr4:48040732..48041262-chr4:48049418..48050146,3	MCF-7	breast:
16	chr4:47914296..47917191-chr4:48017364..48021197,5	MCF-7	breast:
17	chr4:48040732..48041262-chr4:48049418..48050146,3	MCF-7	breast:
18	chr4:48043679..48046228-chr4:48047228..48049577,2	MCF-7	breast:
19	chr4:47950304..47952978-chr4:47956246..47958619,2	MCF-7	breast:
20	chr4:48016518..48018197-chr4:48024501..48026849,2	K562	blood:
21	chr4:48024660..48026222-chr4:48100298..48102831,2	K562	blood:
22	chr4:47688611..47689443-chr4:47936530..47937494,2	K562	blood:
23	chr4:47950304..47952978-chr4:47956246..47958619,2	MCF-7	breast:
24	chr4:48016518..48018197-chr4:48024501..48026849,2	K562	blood:
25	chr4:48018226..48018849-chr5:157285675..157286547,2	HCT-116	colon:
26	chr4:47942692..47945370-chr4:47945557..47947675,2	K562	blood:
27	chr4:48043679..48046228-chr4:48047228..48049577,2	MCF-7	breast:
28	chr4:47938694..47941174-chr4:47942681..47944812,2	K562	blood:
29	chr4:48021540..48023440-chr4:48027193..48032829,5	MCF-7	breast:
30	chr4:48019190..48021605-chr4:48023120..48025588,2	K562	blood:
31	chr4:48040732..48041255-chr4:48049418..48050146,2	MCF-7	breast:
32	chr4:47938694..47941174-chr4:47942681..47944812,2	K562	blood:
33	chr4:48018009..48020666-chr4:48022242..48023763,2	K562	blood:
34	chr4:47931421..47933962-chr4:48023489..48026018,2	MCF-7	breast:
35	chr4:47945827..47947880-chr4:47948710..47950331,2	K562	blood:
36	chr4:48035782..48036490-chr4:48089033..48089753,2	MCF-7	breast:
37	chr4:47688037..47688961-chr4:47935651..47936484,4	K562	blood:
38	chr4:48019190..48021605-chr4:48023120..48025588,2	K562	blood:
39	chr4:48034068..48036913-chr4:48142592..48144853,2	MCF-7	breast:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NIPAL1-1	chr4:48027085-48027211	NONHSAT096273
2	lnc-NIPAL1-1	chr4:47961041-47961158	NONHSAT096274
3	lnc-NIPAL1-1	chr4:47991683-47992754	NONHSAT096275
4	lnc-NIPAL1-1	chr4:47961041-47961156	NONHSAT096275

No data

Variant related genes	Relation type
ENSG00000221764	TF binding region
NIPAL1	TF binding region
CNGA1	TF binding region
ENSG00000221764	CpG island
NIPAL1	CpG island
CNGA1	CpG island
ENSG00000163293	chromatin interactions
ENSG00000198515	chromatin interactions
ENSG00000170448	chromatin interactions
ENSG00000113282	chromatin interactions
ENSG00000135605	chromatin interactions

Extended variants
information (count: 3125 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:3125 , 50 per page) page: 1 2 3 4 5 6 7 ... 63

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs568042581	chr4:47935331-47935332	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs193246380	chr4:47935342-47935343	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs76922107	chr4:47935353-47935354	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs185039810	chr4:47935398-47935399	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs368510057	chr4:47935476-47935477	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs569004005	chr4:47935490-47935491	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs73814618	chr4:47935517-47935518	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs558836410	chr4:47935542-47935543	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs12501949	chr4:47935568-47935569	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
10	rs544176886	chr4:47935572-47935573	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs146328983	chr4:47935640-47935641	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs562946798	chr4:47935641-47935642	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs574827073	chr4:47935646-47935647	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs542318619	chr4:47935652-47935653	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs560043240	chr4:47935653-47935654	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs527497557	chr4:47935654-47935655	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs552471562	chr4:47935661-47935662	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs564349845	chr4:47935679-47935680	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs531669370	chr4:47935694-47935695	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs549500161	chr4:47935707-47935708	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs553083839	chr4:47935718-47935719	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs34394974	chr4:47935722-47935723	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs568092282	chr4:47935780-47935781	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs535164356	chr4:47935845-47935846	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs547487520	chr4:47935862-47935863	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs139546151	chr4:47935870-47935871	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs144183888	chr4:47935876-47935877	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs114732752	chr4:47935917-47935918	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs558762542	chr4:47935923-47935924	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs551877689	chr4:47935928-47935929	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs188193363	chr4:47935944-47935945	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs146155747	chr4:47936002-47936003	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs375439225	chr4:47936004-47936005	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs370760208	chr4:47936108-47936109	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs78981889	chr4:47936156-47936157	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs527257345	chr4:47936165-47936166	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs7684454	chr4:47936242-47936243	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs180939976	chr4:47936306-47936307	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs201597176	chr4:47936310-47936311	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs546003445	chr4:47936332-47936333	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs564311169	chr4:47936364-47936365	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs531631625	chr4:47936369-47936370	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs61026501	chr4:47936400-47936401	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs185557760	chr4:47936433-47936434	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
45	rs149850807	chr4:47936462-47936463	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
46	rs4695315	chr4:47936543-47936544	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs189878696	chr4:47936623-47936624	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs532905837	chr4:47936650-47936651	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs560991466	chr4:47936670-47936671	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs145833894	chr4:47936727-47936728	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
Oral squamous cell carcinoma	17134496	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	22183965	CNVD
Olfactory neuroblastoma	18408657	CNVD
Cancer	22183965	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	21922591	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Multiple myeloma	16616336	CNVD
Parkinson disease	21956041	CNVD
Mental retardation	20522426	CNVD
delayed speech	20522426	CNVD
growth disorder	20522426	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute myeloid leukemia	20729466	CNVD
Renal cell carcinoma	18765545	CNVD
Gastric cancer	16891809	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1119 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:47929200-47936200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr4:47933200-47941600	Weak transcription	Pancreas	Pancrea
3	chr4:47935000-47936000	Weak transcription	Liver	Liver
4	chr4:47936000-47936400	Enhancers	Liver	Liver
5	chr4:47936000-47936800	Enhancers	Fetal Brain Female	brain
6	chr4:47936200-47936400	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr4:47936200-47936600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr4:47936200-47936600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr4:47936400-47936600	Bivalent Enhancer	HUVEC	blood vessel
10	chr4:47936400-47940200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr4:47936400-47950600	Weak transcription	Liver	Liver
12	chr4:47938200-47938400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
13	chr4:47941600-47942600	Enhancers	Pancreas	Pancrea
14	chr4:47942800-47943000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr4:47943000-47944000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr4:47943400-47944400	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr4:47944000-47944400	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr4:47944200-47944600	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr4:47944400-47944800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr4:47944400-47945400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
21	chr4:47944800-47945200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr4:47945200-47946400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr4:47945400-47945600	Enhancers	iPS-15b Cell Line	embryonic stem cell
24	chr4:47946200-47946600	Enhancers	Pancreatic Islets	Pancreatic Islet
25	chr4:47950600-47953600	Strong transcription	Liver	Liver
26	chr4:47953000-47953600	Enhancers	Primary neutrophils fromperipheralblood	blood
27	chr4:47953600-47955400	Weak transcription	Liver	Liver
28	chr4:47954600-47959200	Weak transcription	Right Atrium	heart
29	chr4:47956000-47956600	Active TSS	iPS-15b Cell Line	embryonic stem cell
30	chr4:47956200-47956800	Enhancers	HUES6 Cell Line	embryonic stem cell
31	chr4:47956400-47956800	Enhancers	H9 Cell Line	embryonic stem cell
32	chr4:47956400-47956800	Enhancers	K562	blood
33	chr4:47956600-47957000	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
34	chr4:47973800-47975400	Enhancers	Primary monocytes fromperipheralblood	blood
35	chr4:47974000-47974800	Enhancers	GM12878-XiMat	blood
36	chr4:47974000-47975200	Enhancers	Monocytes-CD14+_RO01746	blood
37	chr4:47975200-47976400	Weak transcription	Monocytes-CD14+_RO01746	blood
38	chr4:47975400-47976400	Weak transcription	Primary monocytes fromperipheralblood	blood
39	chr4:47976400-47977400	Enhancers	Primary monocytes fromperipheralblood	blood
40	chr4:47976400-47977600	Enhancers	Monocytes-CD14+_RO01746	blood
41	chr4:47988000-47988400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
42	chr4:47995200-47997000	Enhancers	Primary T cells from cord blood	blood
43	chr4:47996200-47998400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr4:47998000-47998400	ZNF genes & repeats	Liver	Liver
45	chr4:47998000-47998600	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
46	chr4:47998000-48000200	ZNF genes & repeats	Fetal Intestine Large	intestine
47	chr4:47998400-48000000	Weak transcription	Liver	Liver
48	chr4:48000000-48001800	ZNF genes & repeats	Liver	Liver
49	chr4:48001400-48001800	ZNF genes & repeats	Fetal Intestine Large	intestine
50	chr4:48001800-48003800	Weak transcription	Liver	Liver

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links