Variant report

Variant	nsv1008429
Chromosome Location	chr3:82089650-82510536
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1562)
CpG islands
(count:305)
Chromatin interactive
region (count:15)
LncRNA
region (count:18)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1562 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:82310265-82310567	HepG2	liver:	n/a	n/a
2	ARID3A	chr3:82182138-82182400	HepG2	liver:	n/a	n/a
3	ARID3A	chr3:82378559-82378834	HepG2	liver:	n/a	n/a
4	ARID3A	chr3:82510345-82511417	HepG2	liver:	n/a	n/a
5	ARID3A	chr3:82213172-82213400	HepG2	liver:	n/a	chr3:82213382-82213398
6	ATF1	chr3:82179198-82179569	K562	blood:	n/a	n/a
7	ATF2	chr3:82278469-82278954	GM12878	blood:	n/a	n/a
8	ATF2	chr3:82342943-82343353	GM12878	blood:	n/a	n/a
9	ATF2	chr3:82278485-82278877	GM12878	blood:	n/a	n/a
10	ATF2	chr3:82342876-82343525	GM12878	blood:	n/a	n/a
11	BACH1	chr3:82478194-82478294	H1-hESC	embryonic stem cell:	n/a	n/a
12	BATF	chr3:82278495-82278913	GM12878	blood:	n/a	n/a
13	BATF	chr3:82342976-82343425	GM12878	blood:	n/a	n/a
14	BATF	chr3:82435847-82436174	GM12878	blood:	n/a	n/a
15	BATF	chr3:82127437-82127649	GM12878	blood:	n/a	chr3:82127575-82127586
16	BATF	chr3:82440092-82440346	GM12878	blood:	n/a	n/a
17	BATF	chr3:82131951-82132247	GM12878	blood:	n/a	n/a
18	BATF	chr3:82193203-82193459	GM12878	blood:	n/a	n/a
19	BATF	chr3:82127466-82127636	GM12878	blood:	n/a	chr3:82127575-82127586
20	BATF	chr3:82342967-82343442	GM12878	blood:	n/a	n/a
21	BCL11A	chr3:82343054-82343277	GM12878	blood:	n/a	n/a
22	BCL11A	chr3:82278530-82278839	GM12878	blood:	n/a	n/a
23	BCL11A	chr3:82342979-82343429	GM12878	blood:	n/a	n/a
24	BCL3	chr3:82342980-82343386	GM12878	blood:	n/a	n/a
25	BCLAF1	chr3:82342970-82343372	GM12878	blood:	n/a	n/a
26	BHLHE40	chr3:82341550-82341750	GM12878	blood:	n/a	n/a
27	BHLHE40	chr3:82182080-82182456	GM12878	blood:	n/a	n/a
28	BHLHE40	chr3:82510081-82511066	HepG2	liver:	n/a	chr3:82510379-82510392
29	BHLHE40	chr3:82342993-82343586	GM12878	blood:	n/a	n/a
30	BHLHE40	chr3:82182126-82182462	HepG2	liver:	n/a	n/a
31	BHLHE40	chr3:82182000-82182459	K562	blood:	n/a	n/a
32	BHLHE40	chr3:82128286-82128396	GM12878	blood:	n/a	n/a
33	BRCA1	chr3:82255949-82255989	GM12878	blood:	n/a	n/a
34	CBX3	chr3:82104948-82105365	HCT-116	colon:	n/a	n/a
35	CEBPB	chr3:82382150-82382245	A549	lung:	n/a	n/a
36	CEBPB	chr3:82199142-82199460	HepG2	liver:	n/a	chr3:82199315-82199326 chr3:82199314-82199327
37	CEBPB	chr3:82510317-82510998	HepG2	liver:	n/a	n/a
38	CEBPB	chr3:82309222-82309481	MCF-7	breast:	n/a	chr3:82309337-82309350 chr3:82309338-82309349
39	CEBPB	chr3:82352206-82352428	A549	lung:	n/a	chr3:82352326-82352337 chr3:82352328-82352339 chr3:82352326-82352339 chr3:82352328-82352337
40	CEBPB	chr3:82199211-82199428	A549	lung:	n/a	chr3:82199315-82199326 chr3:82199314-82199327
41	CEBPB	chr3:82473216-82473444	A549	lung:	n/a	chr3:82473260-82473271
42	CEBPB	chr3:82129517-82129787	H1-hESC	embryonic stem cell:	n/a	chr3:82129751-82129764 chr3:82129627-82129639
43	CEBPB	chr3:82309165-82309512	Hela-S3	cervix:	n/a	chr3:82309337-82309350 chr3:82309338-82309349
44	CEBPB	chr3:82412343-82412683	H1-hESC	embryonic stem cell:	n/a	chr3:82412474-82412485
45	CEBPB	chr3:82352148-82352473	IMR90	lung:	n/a	chr3:82352326-82352337 chr3:82352328-82352339 chr3:82352326-82352339 chr3:82352328-82352337
46	CEBPB	chr3:82227482-82227748	H1-hESC	embryonic stem cell:	n/a	n/a
47	CEBPB	chr3:82352154-82352497	HepG2	liver:	n/a	chr3:82352326-82352337 chr3:82352328-82352339 chr3:82352326-82352339 chr3:82352328-82352337
48	CEBPB	chr3:82313078-82313278	HepG2	liver:	n/a	chr3:82313237-82313248
49	CEBPB	chr3:82412329-82412662	IMR90	lung:	n/a	chr3:82412474-82412485
50	CEBPB	chr3:82227465-82227817	HepG2	liver:	n/a	n/a

(count:305 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:82129322-82129372	AoSMC	blood vessel:	n/a
2	chr3:82510133-82510183	K562	blood:	n/a
3	chr3:82510133-82510183	GM12892	blood:	n/a
4	chr3:82510133-82510183	ECC-1	luminal epithelium:	n/a
5	chr3:82314701-82314751	K562	blood:	n/a
6	chr3:82314701-82314751	NHDF-neo	bronchial:	n/a
7	chr3:82510133-82510183	HCT-116	colon:	n/a
8	chr3:82129322-82129372	BE2_C	brain:	n/a
9	chr3:82178370-82178420	K562	blood:	n/a
10	chr3:82293457-82293507	Caco-2	colon:	n/a
11	chr3:82293457-82293507	H1-hESC	embryonic stem cell:	embryo
12	chr3:82510133-82510183	Jurkat	blood:	n/a
13	chr3:82314701-82314751	ProgFib	skin:	n/a
14	chr3:82314701-82314751	AG10803	skin:	n/a
15	chr3:82293457-82293507	HIPEpiC	eye:	n/a
16	chr3:82293457-82293507	AG09309	skin:	n/a
17	chr3:82510133-82510183	AG04449	skin:	fetal
18	chr3:82314701-82314751	AG09319	gingival:	n/a
19	chr3:82129322-82129372	HRPEpiC	eye:	n/a
20	chr3:82510133-82510183	BE2_C	brain:	n/a
21	chr3:82510133-82510183	AG04450	lung:	fetal
22	chr3:82293457-82293507	GM12878	blood:	n/a
23	chr3:82129322-82129372	AG04449	skin:	fetal
24	chr3:82129322-82129372	IMR90	lung:	fetal
25	chr3:82314701-82314751	HRPEpiC	eye:	n/a
26	chr3:82510133-82510183	NHBE	bronchial:	n/a
27	chr3:82314701-82314751	IMR90	lung:	fetal
28	chr3:82314701-82314751	AG04450	lung:	fetal
29	chr3:82314701-82314751	HepG2	liver:	n/a
30	chr3:82293457-82293507	HAEpiC	amniotic membrane:	n/a
31	chr3:82510133-82510183	HPAEpiC	pulmonary alveolar:	n/a
32	chr3:82510133-82510183	A549	lung:	n/a
33	chr3:82510133-82510183	SK-N-SH	brain:	n/a
34	chr3:82129322-82129372	SK-N-SH_RA	brain:	n/a
35	chr3:82314701-82314751	PrEC	prostate:	n/a
36	chr3:82314701-82314751	SK-N-MC	brain:	n/a
37	chr3:82314701-82314751	PANC-1	pancreas:	n/a
38	chr3:82314701-82314751	NB4	blood:	n/a
39	chr3:82129322-82129372	PANC-1	pancreas:	n/a
40	chr3:82129322-82129372	BJ	skin:	n/a
41	chr3:82510133-82510183	T-47D	breast:	n/a
42	chr3:82178370-82178420	HEK293	kidney:	embryo
43	chr3:82178370-82178420	SAEC	small airway:	n/a
44	chr3:82178370-82178420	Jurkat	blood:	n/a
45	chr3:82293457-82293507	A549	lung:	n/a
46	chr3:82293457-82293507	Jurkat	blood:	n/a
47	chr3:82510133-82510183	GM19239	blood:	n/a
48	chr3:82293457-82293507	HNPCEpiC	eye:	n/a
49	chr3:82510133-82510183	NB4	blood:	n/a
50	chr3:82129322-82129372	H1-hESC	embryonic stem cell:	embryo

(count:15 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:82338513..82340160-chr3:82342810..82345015,2	MCF-7	breast:
2	chr3:82454694..82457422-chr3:82457978..82460293,2	K562	blood:
3	chr3:82170424..82171997-chr3:82175422..82177557,2	MCF-7	breast:
4	chr3:82376131..82377766-chr3:82390133..82393109,2	MCF-7	breast:
5	chr14:65016669..65017169-chr3:82090480..82091058,2	MCF-7	breast:
6	chr3:82182859..82185317-chr3:82190117..82192068,2	MCF-7	breast:
7	chr3:82376131..82377766-chr3:82390133..82393109,2	MCF-7	breast:
8	chr3:82182859..82185317-chr3:82190117..82192068,2	MCF-7	breast:
9	chr3:82044423..82045130-chr3:82182277..82182777,2	MCF-7	breast:
10	chr3:82338513..82340160-chr3:82342810..82345015,2	MCF-7	breast:
11	chr3:82134680..82135474-chr3:82182067..82182736,2	MCF-7	breast:
12	chr3:82454694..82457422-chr3:82457978..82460293,2	K562	blood:
13	chr3:81630866..81631772-chr3:82182178..82183039,2	MCF-7	breast:
14	chr3:82170424..82171997-chr3:82175422..82177557,2	MCF-7	breast:
15	chr3:82134680..82135474-chr3:82182067..82182736,2	MCF-7	breast:

(count:18 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CADM2-13	chr3:82334170-82334295	ucscGeneNc_uc003dqh_1
2	lnc-CADM2-6	chr3:82465271-82465452	ENSG00000239440
3	lnc-CADM2-6	chr3:82507102-82507298	ENSG00000239440
4	lnc-CADM2-6	chr3:82091876-82091941	ENSG00000239440
5	lnc-CADM2-6	chr3:82234503-82234604	ENSG00000239440
6	lnc-CADM2-6	chr3:82251480-82251605	NONHSAT090628
7	lnc-CADM2-6	chr3:82234503-82234604	ENSG00000239440
8	lnc-CADM2-13	chr3:82117979-82118222	ucscGeneNc_uc003dqh_1
9	lnc-CADM2-6	chr3:82504823-82504966	ENSG00000239440
10	lnc-CADM2-6	chr3:82251480-82251605	ENSG00000239440
11	lnc-CADM2-6	chr3:82503537-82503661	ENSG00000239440
12	lnc-CADM2-6	chr3:82465271-82466416	NONHSAT090628
13	lnc-CADM2-6	chr3:82234526-82234604	NONHSAT090628
14	lnc-CADM2-13	chr3:82317193-82317294	ucscGeneNc_uc003dqh_1
15	lnc-CADM2-6	chr3:82251480-82251605	ENSG00000239440
16	lnc-CADM2-6	chr3:82502633-82502703	ENSG00000239440
17	lnc-GBE1-8	chr3:82368323-82368935	NONHSAT090629
18	lnc-GBE1-8	chr3:82369268-82369430	NONHSAT090629

No data

Variant related genes	Relation type
RPL7AP23	TF binding region
RPL7AP23	CpG island
ENSG00000165807	chromatin interactions
NAV3	miRNA target sites
ERO1LB	miRNA target sites
TNFAIP3	miRNA target sites
PIM3	miRNA target sites
ZFP91	miRNA target sites
YWHAH	miRNA target sites
KREMEN2	miRNA target sites
RET	miRNA target sites
SPARC	miRNA target sites

Extended variants
information (count: 6817 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:6817 , 50 per page) page: 1 2 3 4 5 6 7 ... 137

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs114686254	chr3:82089661-82089662	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs569001287	chr3:82089672-82089673	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs538044087	chr3:82089730-82089731	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs557484038	chr3:82089740-82089741	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs537461767	chr3:82089749-82089750	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs576933869	chr3:82089760-82089761	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs561234690	chr3:82089778-82089779	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs550665648	chr3:82089781-82089782	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs113444272	chr3:82089784-82089785	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs552972091	chr3:82089810-82089811	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs573174744	chr3:82089825-82089826	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs185893737	chr3:82089826-82089827	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs542198375	chr3:82089835-82089836	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs562401691	chr3:82089839-82089840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs531063595	chr3:82089853-82089854	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs544797089	chr3:82089857-82089858	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs190770107	chr3:82089867-82089868	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs368117167	chr3:82089868-82089869	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs150633448	chr3:82089893-82089894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs75473274	chr3:82089939-82089940	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs531550453	chr3:82089960-82089961	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs2141490	chr3:82090015-82090016	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs377083460	chr3:82090071-82090072	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs2056772	chr3:82090074-82090075	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs549057166	chr3:82090076-82090077	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs569137712	chr3:82090163-82090164	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs532255678	chr3:82090205-82090206	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs183010525	chr3:82090229-82090230	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs116319974	chr3:82090266-82090267	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs571082282	chr3:82090281-82090282	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs35365184	chr3:82090338-82090339	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs147546153	chr3:82090347-82090348	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs187897199	chr3:82090391-82090392	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs140189998	chr3:82090456-82090457	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs541415568	chr3:82090489-82090490	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs190332552	chr3:82090500-82090501	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs575906268	chr3:82090521-82090522	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs182918718	chr3:82090558-82090559	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs114807871	chr3:82090601-82090602	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs564695424	chr3:82090650-82090651	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs187546819	chr3:82090689-82090690	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs192368587	chr3:82090731-82090732	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs560194185	chr3:82090794-82090795	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs538390238	chr3:82090802-82090803	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs528937605	chr3:82090843-82090844	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs548973412	chr3:82090855-82090856	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs77972722	chr3:82090860-82090861	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs558625181	chr3:82090862-82090863	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs145059310	chr3:82090887-82090888	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs575211588	chr3:82090926-82090927	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Glioblastoma multiforme	21080181	CNVD
Melanoma	18172304	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Acute myeloid leukemia	20729466	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Metanephric adenoma	20802469	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Wilms tumour	21544195	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Colorectal cancer	16272173	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Soft tissue tumor	16732325	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
Mental retardation	17124404	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Autism	20808228	CNVD
Urothelial carcinoma	21177765	CNVD
Neurodevelopmental disorder	22521361	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:655 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:82083400-82093000	Weak transcription	Brain Germinal Matrix	brain
2	chr3:82093000-82093800	Enhancers	Brain Germinal Matrix	brain
3	chr3:82094200-82095000	Enhancers	NHEK	skin
4	chr3:82094600-82094800	Enhancers	Spleen	Spleen
5	chr3:82095000-82097600	Weak transcription	NHEK	skin
6	chr3:82097600-82100600	Enhancers	NHEK	skin
7	chr3:82097800-82106400	Weak transcription	Pancreatic Islets	Pancreatic Islet
8	chr3:82098000-82098800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr3:82098400-82098600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr3:82098400-82101200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr3:82098600-82099600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr3:82098800-82099200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr3:82099200-82100400	Enhancers	HMEC	breast
14	chr3:82099200-82101400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr3:82099600-82100000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr3:82100000-82104800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr3:82100400-82100800	Weak transcription	HMEC	breast
18	chr3:82100600-82101000	Weak transcription	NHEK	skin
19	chr3:82100800-82101000	Enhancers	HMEC	breast
20	chr3:82101000-82101600	Enhancers	NHEK	skin
21	chr3:82101000-82104200	Weak transcription	HMEC	breast
22	chr3:82101200-82104800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr3:82101400-82104200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr3:82101600-82104800	Weak transcription	NHEK	skin
25	chr3:82104200-82104600	Enhancers	Skeletal Muscle Male	skeletal muscle
26	chr3:82104200-82105200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr3:82104200-82105400	Enhancers	Breast Myoepithelial Primary Cells	Breast
28	chr3:82104200-82105600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr3:82104200-82105800	Enhancers	HMEC	breast
30	chr3:82104600-82105000	Weak transcription	Skeletal Muscle Male	skeletal muscle
31	chr3:82104800-82105200	Enhancers	Left Ventricle	heart
32	chr3:82104800-82105400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr3:82104800-82105600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
34	chr3:82104800-82105800	Enhancers	NHEK	skin
35	chr3:82105000-82105200	Enhancers	Skeletal Muscle Male	skeletal muscle
36	chr3:82105000-82105400	Enhancers	Muscle Satellite Cultured Cells	--
37	chr3:82105000-82105600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr3:82105000-82106000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
39	chr3:82105200-82108000	Weak transcription	Skeletal Muscle Male	skeletal muscle
40	chr3:82105400-82107800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
41	chr3:82105400-82108000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
42	chr3:82107800-82108600	Enhancers	Breast Myoepithelial Primary Cells	Breast
43	chr3:82108000-82108200	Active TSS	Psoas Muscle	Psoas
44	chr3:82108000-82108200	Active TSS	Skeletal Muscle Male	skeletal muscle
45	chr3:82108000-82108400	Active TSS	Skeletal Muscle Female	skeletal muscle
46	chr3:82108000-82108600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
47	chr3:82108200-82108400	Flanking Active TSS	Psoas Muscle	Psoas
48	chr3:82108200-82108400	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
49	chr3:82108200-82108400	Enhancers	Spleen	Spleen
50	chr3:82108400-82108600	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links