Variant report

Variant	nsv1009092
Chromosome Location	chr1:86532988-86724805
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr1:86622471-86622940	H1-hESC	embryonic stem cell:	n/a	n/a
2	ATF2	chr1:86622413-86622924	H1-hESC	embryonic stem cell:	n/a	n/a
3	BACH1	chr1:86659006-86659124	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr1:86551199-86551201	K562	blood:	n/a	n/a
5	BACH1	chr1:86620362-86620452	H1-hESC	embryonic stem cell:	n/a	n/a
6	BCL11A	chr1:86585657-86585855	GM12878	blood:	n/a	n/a
7	CEBPB	chr1:86585111-86585372	H1-hESC	embryonic stem cell:	n/a	chr1:86585249-86585262
8	CEBPB	chr1:86585161-86585427	A549	lung:	n/a	chr1:86585249-86585262
9	CEBPB	chr1:86680297-86680652	A549	lung:	n/a	chr1:86680479-86680490 chr1:86680481-86680490 chr1:86680481-86680490 chr1:86680479-86680492 chr1:86680481-86680490 chr1:86680481-86680490
10	CEBPB	chr1:86623700-86623955	A549	lung:	n/a	chr1:86623823-86623834 chr1:86623850-86623861
11	CEBPB	chr1:86657689-86657950	IMR90	lung:	n/a	n/a
12	CEBPB	chr1:86680315-86680658	Hela-S3	cervix:	n/a	chr1:86680479-86680490 chr1:86680481-86680490 chr1:86680481-86680490 chr1:86680479-86680492 chr1:86680481-86680490 chr1:86680481-86680490
13	CEBPB	chr1:86671365-86671684	IMR90	lung:	n/a	n/a
14	CEBPB	chr1:86680306-86680675	IMR90	lung:	n/a	chr1:86680479-86680490 chr1:86680481-86680490 chr1:86680481-86680490 chr1:86680479-86680492 chr1:86680481-86680490 chr1:86680481-86680490
15	CEBPB	chr1:86699624-86699816	A549	lung:	n/a	n/a
16	CEBPB	chr1:86680243-86680657	H1-hESC	embryonic stem cell:	n/a	chr1:86680479-86680490 chr1:86680481-86680490 chr1:86680481-86680490 chr1:86680479-86680492 chr1:86680481-86680490 chr1:86680481-86680490
17	CEBPB	chr1:86623670-86624040	HepG2	liver:	n/a	chr1:86623823-86623834 chr1:86623850-86623861
18	CEBPB	chr1:86553737-86553915	HepG2	liver:	n/a	n/a
19	CEBPB	chr1:86623688-86624041	IMR90	lung:	n/a	chr1:86623823-86623834 chr1:86623850-86623861
20	CEBPB	chr1:86680293-86680725	ECC-1	luminal epithelium:	n/a	chr1:86680479-86680490 chr1:86680481-86680490 chr1:86680481-86680490 chr1:86680479-86680492 chr1:86680481-86680490 chr1:86680481-86680490
21	CEBPB	chr1:86660526-86660605	IMR90	lung:	n/a	n/a
22	CEBPB	chr1:86680305-86680706	A549	lung:	n/a	chr1:86680479-86680490 chr1:86680481-86680490 chr1:86680481-86680490 chr1:86680479-86680492 chr1:86680481-86680490 chr1:86680481-86680490
23	CEBPB	chr1:86603053-86603575	IMR90	lung:	n/a	n/a
24	CEBPB	chr1:86585106-86585417	HepG2	liver:	n/a	chr1:86585249-86585262
25	CEBPB	chr1:86680299-86680679	K562	blood:	n/a	chr1:86680479-86680490 chr1:86680481-86680490 chr1:86680481-86680490 chr1:86680479-86680492 chr1:86680481-86680490 chr1:86680481-86680490
26	CEBPB	chr1:86699694-86699888	HepG2	liver:	n/a	n/a
27	CEBPB	chr1:86604465-86604860	IMR90	lung:	n/a	n/a
28	CEBPB	chr1:86651256-86651313	HepG2	liver:	n/a	chr1:86651288-86651299
29	CEBPB	chr1:86623727-86623901	H1-hESC	embryonic stem cell:	n/a	chr1:86623823-86623834 chr1:86623850-86623861
30	CEBPB	chr1:86623691-86623980	K562	blood:	n/a	chr1:86623823-86623834 chr1:86623850-86623861
31	CEBPB	chr1:86570726-86571149	MCF-7	breast:	n/a	n/a
32	CEBPB	chr1:86585042-86585447	IMR90	lung:	n/a	chr1:86585249-86585262
33	CEBPB	chr1:86662513-86662982	IMR90	lung:	n/a	chr1:86662943-86662952
34	CEBPB	chr1:86651189-86651447	IMR90	lung:	n/a	chr1:86651288-86651299
35	CEBPB	chr1:86695904-86696155	HepG2	liver:	n/a	chr1:86696020-86696031
36	CEBPB	chr1:86680344-86680647	MCF-7	breast:	n/a	chr1:86680479-86680490 chr1:86680481-86680490 chr1:86680481-86680490 chr1:86680479-86680492 chr1:86680481-86680490 chr1:86680481-86680490
37	CEBPB	chr1:86680297-86680643	ECC-1	luminal epithelium:	n/a	chr1:86680479-86680490 chr1:86680481-86680490 chr1:86680481-86680490 chr1:86680479-86680492 chr1:86680481-86680490 chr1:86680481-86680490
38	CEBPB	chr1:86619607-86619788	IMR90	lung:	n/a	n/a
39	CEBPB	chr1:86680324-86680674	HepG2	liver:	n/a	chr1:86680479-86680490 chr1:86680481-86680490 chr1:86680481-86680490 chr1:86680479-86680492 chr1:86680481-86680490 chr1:86680481-86680490
40	CEBPB	chr1:86535599-86535705	IMR90	lung:	n/a	n/a
41	CEBPB	chr1:86691868-86691915	IMR90	lung:	n/a	n/a
42	CEBPB	chr1:86680264-86680645	A549	lung:	n/a	chr1:86680479-86680490 chr1:86680481-86680490 chr1:86680481-86680490 chr1:86680479-86680492 chr1:86680481-86680490 chr1:86680481-86680490
43	CHD2	chr1:86620559-86621156	H1-hESC	embryonic stem cell:	n/a	n/a
44	CHD2	chr1:86622474-86622828	H1-hESC	embryonic stem cell:	n/a	n/a
45	CREB1	chr1:86622489-86622953	H1-hESC	embryonic stem cell:	n/a	n/a
46	CTBP2	chr1:86622264-86622994	H1-hESC	embryonic stem cell:	n/a	n/a
47	CTCF	chr1:86548013-86548154	Medullo	brain:	n/a	n/a
48	CTCF	chr1:86548060-86548210	HUVEC	blood vessel:	n/a	n/a
49	CTCF	chr1:86612340-86612490	NHDF-neo	bronchial:	n/a	chr1:86612437-86612455 chr1:86612439-86612460
50	CTCF	chr1:86548100-86548250	A549	lung:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:86621354-86621404	HNPCEpiC	eye:	n/a
2	chr1:86620676-86620726	CMK	blood:	n/a
3	chr1:86622737-86622787	PANC-1	pancreas:	n/a
4	chr1:86622113-86622163	HCF	heart:	n/a
5	chr1:86550209-86550259	Caco-2	colon:	n/a
6	chr1:86622113-86622163	AG09309	skin:	n/a
7	chr1:86576497-86576547	GM12891	blood:	n/a
8	chr1:86622552-86622602	HAEpiC	amniotic membrane:	n/a
9	chr1:86622552-86622602	NB4	blood:	n/a
10	chr1:86617731-86617781	SK-N-SH	brain:	n/a
11	chr1:86571125-86571175	HepG2	liver:	n/a
12	chr1:86621931-86621981	HNPCEpiC	eye:	n/a
13	chr1:86622552-86622602	A549	lung:	n/a
14	chr1:86623101-86623151	H1-hESC	embryonic stem cell:	embryo
15	chr1:86550209-86550259	BE2_C	brain:	n/a
16	chr1:86622682-86622732	NHBE	bronchial:	n/a
17	chr1:86571125-86571175	PANC-1	pancreas:	n/a
18	chr1:86622628-86622678	AG10803	skin:	n/a
19	chr1:86576497-86576547	HCM	heart:	n/a
20	chr1:86534132-86534182	NH-A	brain:	n/a
21	chr1:86622552-86622602	BE2_C	brain:	n/a
22	chr1:86576497-86576547	CMK	blood:	n/a
23	chr1:86620676-86620726	U87	brain:	n/a
24	chr1:86571125-86571175	HCT-116	colon:	n/a
25	chr1:86622628-86622678	H1-hESC	embryonic stem cell:	embryo
26	chr1:86576497-86576547	NT2-D1	testis:	n/a
27	chr1:86621584-86621634	HNPCEpiC	eye:	n/a
28	chr1:86621584-86621634	HMEC	breast:	n/a
29	chr1:86621584-86621634	AG09319	gingival:	n/a
30	chr1:86622682-86622732	AG10803	skin:	n/a
31	chr1:86621931-86621981	HCF	heart:	n/a
32	chr1:86622395-86622445	T-47D	breast:	n/a
33	chr1:86621354-86621404	AG04449	skin:	fetal
34	chr1:86622628-86622678	AG04449	skin:	fetal
35	chr1:86621931-86621981	Hela-S3	cervix:	n/a
36	chr1:86623101-86623151	GM19239	blood:	n/a
37	chr1:86622628-86622678	NT2-D1	testis:	n/a
38	chr1:86621584-86621634	SAEC	small airway:	n/a
39	chr1:86617731-86617781	NHDF-neo	bronchial:	n/a
40	chr1:86620525-86620575	PANC-1	pancreas:	n/a
41	chr1:86571125-86571175	NB4	blood:	n/a
42	chr1:86576497-86576547	ProgFib	skin:	n/a
43	chr1:86622737-86622787	GM19239	blood:	n/a
44	chr1:86622737-86622787	ovcar-3	ovarian:	n/a
45	chr1:86571125-86571175	ovcar-3	ovarian:	n/a
46	chr1:86617731-86617781	HEEpiC	esophagus:	n/a
47	chr1:86622395-86622445	GM19239	blood:	n/a
48	chr1:86620676-86620726	A549	lung:	n/a
49	chr1:86622113-86622163	U87	brain:	n/a
50	chr1:86550209-86550259	T-47D	breast:	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:86672265..86674094-chr1:86686989..86689347,2	K562	blood:
2	chr1:86563595..86565370-chr1:86580551..86582713,2	K562	blood:
3	chr1:86672265..86674094-chr1:86686989..86689347,2	K562	blood:
4	chr1:86622530..86625181-chr1:86626721..86629086,2	K562	blood:
5	chr1:86617209..86618987-chr1:86626042..86627829,2	K562	blood:
6	chr1:86617209..86618987-chr1:86626042..86627829,2	K562	blood:
7	chr1:86687667..86689608-chr1:86691376..86693441,2	K562	blood:
8	chr1:85773777..85774424-chr1:86635033..86635898,2	MCF-7	breast:
9	chr1:86563595..86565370-chr1:86580551..86582713,2	K562	blood:
10	chr1:86687667..86689608-chr1:86691376..86693441,2	K562	blood:
11	chr1:86617696..86619956-chr1:86620495..86622655,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ODF2L-3	chr1:86622361-86622455	NONHSAT004264
2	lnc-ODF2L-3	chr1:86619756-86621905	NONHSAT004264
3	lnc-ODF2L-3	chr1:86622024-86622154	NONHSAT004264

Variant related genes	Relation type
COL24A1	TF binding region
COL24A1	CpG island
ENSG00000171502	chromatin interactions

Extended variants
information (count: 6082 )
Associated
traits (count: 98 )

Variant overlapped rSNPs/rCNVs (count:6082 , 50 per page) page: 1 2 3 4 5 6 7 ... 122

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs541800664	chr1:86533011-86533012	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs72716145	chr1:86533095-86533096	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs17415692	chr1:86533142-86533143	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs75423695	chr1:86533215-86533216	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs566683169	chr1:86533250-86533251	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs532742333	chr1:86533272-86533273	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs146487017	chr1:86533278-86533279	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs12070865	chr1:86533371-86533372	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs192611507	chr1:86533375-86533376	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs12755069	chr1:86533386-86533387	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs545253040	chr1:86533525-86533526	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs568485331	chr1:86533555-86533556	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs150402392	chr1:86533619-86533620	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs138671401	chr1:86533643-86533644	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs113431213	chr1:86533718-86533719	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs10443173	chr1:86533754-86533755	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs12071046	chr1:86533810-86533811	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs34120331	chr1:86533816-86533817	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs148996907	chr1:86533936-86533937	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs184863245	chr1:86533973-86533974	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs576074106	chr1:86533974-86533975	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs541589337	chr1:86533999-86534000	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs34190391	chr1:86534006-86534007	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs561320999	chr1:86534077-86534078	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs552300479	chr1:86534092-86534093	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs568702498	chr1:86534097-86534098	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs146243778	chr1:86534133-86534134	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs532734234	chr1:86534140-86534141	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs552720131	chr1:86534197-86534198	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs137990270	chr1:86534203-86534204	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs142471293	chr1:86534233-86534234	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs543765863	chr1:86534250-86534251	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs377120969	chr1:86534261-86534262	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs79564378	chr1:86534292-86534293	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs34671055	chr1:86534295-86534296	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs189243453	chr1:86534316-86534317	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs534188784	chr1:86534356-86534357	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs11802445	chr1:86534357-86534358	Enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs12740162	chr1:86534450-86534451	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs12760633	chr1:86534451-86534452	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs537603893	chr1:86534480-86534481	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs373503334	chr1:86534593-86534594	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs573941297	chr1:86534617-86534618	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs192897401	chr1:86534630-86534631	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs542799120	chr1:86534652-86534653	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs547155828	chr1:86534656-86534657	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs556302764	chr1:86534677-86534678	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs368542938	chr1:86534678-86534679	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs576181350	chr1:86534701-86534702	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs548369254	chr1:86534736-86534737	Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:98)

Disease	PMID	Source
Colorectal cancer	16272173	CNVD
Medulloblastoma	21979893	CNVD
Wilms tumour	21544195	CNVD
Coronary Disease	20032323	CNVD
Prostate cancer	21965145	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Stargardt''s disease	17277736	CNVD
Neuroblastoma	17897457	CNVD
Uveal melanoma	21693616	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-syndromic sensorineural hearing loss	22290220	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	21264507	CNVD
Acute myeloid leukemia	16864856	CNVD
Astrocytoma	17387387	CNVD
Cancer	21499728	CNVD
Glioblastoma multiforme	17387387	CNVD
Oligodendroglial tumors	17285580	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Neuroblastoma	17535989	CNVD
Pheochromocytoma	17535989	CNVD
Prostate cancer	16705090	CNVD
Astrocytoma	17934521	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Neuroblastoma	17533364	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Autism	22495311	CNVD
Non-small cell lung cancer	21385341	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Chordoma	21602918	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Melanoma	18172304	CNVD
Multiple myeloma	16461302	CNVD
Cancer	21129771	CNVD
Autosomal dominant nocturnal frontal lobe epilepsy	18472482	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-small cell lung cancer	20864512	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Thrombocytopenia-absent radius syndrome	21933853	CNVD
Psychiatric disorder	22848183	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	20409316	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17393978	CNVD
Cervical cancer	21062161	CNVD
Cancer	21183584	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21364760	CNVD
Rett syndrome	21593744	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16608533	CNVD
Ovarian cancer	21720365	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Ewing''s sarcoma	17952124	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Cancer	22429812	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	17133270	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Multiple myeloma	17550852	CNVD
Myelofibrosis	22110671	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	16397240	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Esophageal adenocarcinoma	18820669	CNVD
small cell lung cancer	20016488	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Ovarian cancer	21781307	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:965 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:86523000-86533800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr1:86528600-86533200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr1:86528600-86533200	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr1:86528600-86534000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr1:86528800-86533000	Weak transcription	Osteobl	bone
6	chr1:86530800-86533800	Weak transcription	Fetal Lung	lung
7	chr1:86531000-86533000	Weak transcription	HUVEC	blood vessel
8	chr1:86531400-86533800	Weak transcription	Fetal Muscle Leg	muscle
9	chr1:86531400-86534000	Weak transcription	H1 Cell Line	embryonic stem cell
10	chr1:86531800-86533800	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr1:86533000-86534000	Weak transcription	Aorta	Aorta
12	chr1:86533000-86535200	Enhancers	HUVEC	blood vessel
13	chr1:86533000-86535400	Enhancers	NHDF-Ad	bronchial
14	chr1:86533000-86535600	Enhancers	NH-A	brain
15	chr1:86533000-86535600	Enhancers	Osteobl	bone
16	chr1:86533200-86535200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr1:86533200-86535200	Enhancers	Muscle Satellite Cultured Cells	--
18	chr1:86533800-86534000	Enhancers	iPS-15b Cell Line	embryonic stem cell
19	chr1:86533800-86534000	Enhancers	Fetal Stomach	stomach
20	chr1:86533800-86534200	Enhancers	HUES64 Cell Line	embryonic stem cell
21	chr1:86533800-86534200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr1:86533800-86534200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
23	chr1:86533800-86534400	Enhancers	HUES48 Cell Line	embryonic stem cell
24	chr1:86533800-86534400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr1:86533800-86534800	ZNF genes & repeats	Fetal Lung	lung
26	chr1:86533800-86535000	Enhancers	Skeletal Muscle Male	skeletal muscle
27	chr1:86533800-86535200	Enhancers	HSMMtube	muscle
28	chr1:86533800-86535400	Enhancers	Fetal Muscle Leg	muscle
29	chr1:86533800-86535400	Enhancers	NHLF	lung
30	chr1:86533800-86535600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr1:86534000-86534400	Enhancers	ES-I3 Cell Line	embryonic stem cell
32	chr1:86534000-86534400	Enhancers	H1 Cell Line	embryonic stem cell
33	chr1:86534000-86534400	Enhancers	H9 Cell Line	embryonic stem cell
34	chr1:86534000-86534400	Enhancers	Aorta	Aorta
35	chr1:86534000-86534400	Enhancers	Stomach Smooth Muscle	stomach
36	chr1:86534000-86534600	Enhancers	Esophagus	oesophagus
37	chr1:86534000-86534600	Enhancers	Psoas Muscle	Psoas
38	chr1:86534000-86534800	ZNF genes & repeats	Fetal Stomach	stomach
39	chr1:86534000-86534800	Enhancers	Skeletal Muscle Female	skeletal muscle
40	chr1:86534000-86535200	Enhancers	HSMM	muscle
41	chr1:86534000-86535400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
42	chr1:86534000-86535400	Enhancers	Fetal Muscle Trunk	muscle
43	chr1:86534000-86535600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr1:86534000-86535600	Enhancers	Adipose Nuclei	Adipose
45	chr1:86534000-86536000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr1:86534000-86536600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr1:86534200-86535400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
48	chr1:86534200-86535600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr1:86534200-86535600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr1:86534600-86535400	Enhancers	NHEK	skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links