Variant report

Variant nsv1010312
Chromosome Location chr1:86469730-86686426
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:909 , 50 per page) page: 1 2 3 4 5 6 7 ... 19
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:86459200-86472000 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr1:86459200-86472200 Weak transcription Stomach Smooth Muscle stomach
3 chr1:86464000-86469800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr1:86468400-86470400 Strong transcription Fetal Lung lung
5 chr1:86469000-86469800 Strong transcription Fetal Muscle Leg muscle
6 chr1:86469800-86472000 Weak transcription Fetal Muscle Leg muscle
7 chr1:86469800-86472400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr1:86469800-86477400 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr1:86470400-86471400 ZNF genes & repeats Fetal Lung lung
10 chr1:86471400-86471800 Strong transcription Fetal Lung lung
11 chr1:86471800-86473800 ZNF genes & repeats Fetal Lung lung
12 chr1:86472200-86472400 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr1:86473800-86480200 Weak transcription Fetal Lung lung
14 chr1:86477200-86477600 Enhancers Colon Smooth Muscle Colon
15 chr1:86480200-86482200 Strong transcription Fetal Lung lung
16 chr1:86480800-86481800 Enhancers GM12878-XiMat blood
17 chr1:86481800-86482200 Flanking Active TSS GM12878-XiMat blood
18 chr1:86482200-86484000 Enhancers GM12878-XiMat blood
19 chr1:86482200-86487600 Weak transcription Fetal Lung lung
20 chr1:86483600-86484600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr1:86484600-86489400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr1:86485000-86486800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
23 chr1:86487600-86488200 Strong transcription Fetal Lung lung
24 chr1:86488200-86493000 Weak transcription Fetal Lung lung
25 chr1:86493000-86493800 Weak transcription Fetal Muscle Trunk muscle
26 chr1:86493000-86494200 Strong transcription Fetal Lung lung
27 chr1:86494200-86506800 Weak transcription Fetal Lung lung
28 chr1:86497800-86498000 Enhancers Aorta Aorta
29 chr1:86503000-86503200 Enhancers Fetal Intestine Large intestine
30 chr1:86506600-86508600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:86506800-86507800 Enhancers Fetal Lung lung
32 chr1:86507000-86507400 Enhancers Rectal Smooth Muscle rectum
33 chr1:86507000-86507600 Enhancers Colon Smooth Muscle Colon
34 chr1:86507200-86508000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
35 chr1:86507400-86507800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr1:86507800-86520400 Weak transcription Fetal Lung lung
37 chr1:86517000-86517400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:86517400-86519200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:86518200-86519800 Enhancers GM12878-XiMat blood
40 chr1:86518600-86518800 Enhancers NHLF lung
41 chr1:86519200-86519800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
42 chr1:86519400-86519600 Enhancers NHLF lung
43 chr1:86519800-86522000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr1:86520000-86520200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr1:86520400-86521000 Strong transcription Fetal Lung lung
46 chr1:86520800-86521000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:86521000-86527200 Weak transcription Fetal Lung lung
48 chr1:86522000-86523000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
49 chr1:86522800-86523000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
50 chr1:86522800-86523000 Enhancers Psoas Muscle Psoas

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