Variant report

Variant	nsv1013407
Chromosome Location	chr3:85307022-85460325
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr3:85423175-85423346	H1-hESC	embryonic stem cell:	n/a	chr3:85423236-85423247
2	CEBPB	chr3:85440642-85440887	H1-hESC	embryonic stem cell:	n/a	chr3:85440748-85440759 chr3:85440750-85440759 chr3:85440748-85440761 chr3:85440750-85440759 chr3:85440750-85440759 chr3:85440750-85440759 chr3:85440749-85440760 chr3:85440748-85440761
3	CEBPB	chr3:85352460-85352731	HepG2	liver:	n/a	chr3:85352574-85352585
4	CEBPB	chr3:85352519-85352674	A549	lung:	n/a	chr3:85352574-85352585
5	CEBPB	chr3:85440575-85440914	IMR90	lung:	n/a	chr3:85440748-85440759 chr3:85440750-85440759 chr3:85440748-85440761 chr3:85440750-85440759 chr3:85440750-85440759 chr3:85440750-85440759 chr3:85440749-85440760 chr3:85440748-85440761
6	CEBPB	chr3:85320033-85320475	MCF-7	breast:	n/a	n/a
7	CEBPB	chr3:85423130-85423398	A549	lung:	n/a	chr3:85423236-85423247
8	CEBPB	chr3:85440604-85440910	HepG2	liver:	n/a	chr3:85440748-85440759 chr3:85440750-85440759 chr3:85440748-85440761 chr3:85440750-85440759 chr3:85440750-85440759 chr3:85440750-85440759 chr3:85440749-85440760 chr3:85440748-85440761
9	CEBPB	chr3:85415076-85415195	H1-hESC	embryonic stem cell:	n/a	chr3:85415166-85415177
10	CEBPB	chr3:85423114-85423389	IMR90	lung:	n/a	chr3:85423236-85423247
11	CEBPB	chr3:85440607-85440855	K562	blood:	n/a	chr3:85440748-85440759 chr3:85440750-85440759 chr3:85440748-85440761 chr3:85440750-85440759 chr3:85440750-85440759 chr3:85440750-85440759 chr3:85440749-85440760 chr3:85440748-85440761
12	CEBPB	chr3:85415054-85415293	HepG2	liver:	n/a	chr3:85415166-85415177
13	CEBPB	chr3:85440573-85440896	A549	lung:	n/a	chr3:85440748-85440759 chr3:85440750-85440759 chr3:85440748-85440761 chr3:85440750-85440759 chr3:85440750-85440759 chr3:85440750-85440759 chr3:85440749-85440760 chr3:85440748-85440761
14	CEBPB	chr3:85320100-85320366	MCF-7	breast:	n/a	n/a
15	CEBPB	chr3:85440588-85440884	Hela-S3	cervix:	n/a	chr3:85440748-85440759 chr3:85440750-85440759 chr3:85440748-85440761 chr3:85440750-85440759 chr3:85440750-85440759 chr3:85440750-85440759 chr3:85440749-85440760 chr3:85440748-85440761
16	CEBPB	chr3:85423124-85423388	HepG2	liver:	n/a	chr3:85423236-85423247
17	CHD2	chr3:85371519-85371543	H1-hESC	embryonic stem cell:	n/a	n/a
18	CTCF	chr3:85353620-85353770	HCT-116	colon:	n/a	chr3:85353708-85353718 chr3:85353704-85353720 chr3:85353706-85353715 chr3:85353705-85353726 chr3:85353703-85353721
19	CTCF	chr3:85392072-85392468	GM12878	blood:	n/a	n/a
20	CTCF	chr3:85392180-85392330	HMF	breast:	n/a	n/a
21	CTCF	chr3:85353620-85353770	HepG2	liver:	n/a	chr3:85353708-85353718 chr3:85353704-85353720 chr3:85353706-85353715 chr3:85353705-85353726 chr3:85353703-85353721
22	CTCF	chr3:85410020-85410170	GM12873	blood:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
23	CTCF	chr3:85410000-85410150	GM12801	blood:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
24	CTCF	chr3:85392193-85392335	HUVEC	blood vessel:	n/a	n/a
25	CTCF	chr3:85409955-85410235	A549	lung:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
26	CTCF	chr3:85410040-85410190	SAEC	small airway:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
27	CTCF	chr3:85392200-85392350	HA-sp	spinal cord:	n/a	n/a
28	CTCF	chr3:85392157-85392417	LNCaP	prostate:	n/a	n/a
29	CTCF	chr3:85410020-85410170	HPAF	blood vessel:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
30	CTCF	chr3:85410100-85410250	HUVEC	blood vessel:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410106-85410119
31	CTCF	chr3:85409975-85410215	GM19239	blood:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
32	CTCF	chr3:85409951-85410205	A549	lung:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
33	CTCF	chr3:85410020-85410170	BJ	skin:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
34	CTCF	chr3:85410060-85410210	BE2_C	brain:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
35	CTCF	chr3:85410020-85410170	AG04449	skin:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
36	CTCF	chr3:85410000-85410150	HepG2	liver:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
37	CTCF	chr3:85410000-85410150	GM12864	blood:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
38	CTCF	chr3:85410006-85410183	Lung_OC	lung:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
39	CTCF	chr3:85353640-85353790	HCPEpiC	choroid plexus:	n/a	chr3:85353708-85353718 chr3:85353704-85353720 chr3:85353706-85353715 chr3:85353705-85353726 chr3:85353703-85353721
40	CTCF	chr3:85392150-85392344	IMR90	lung:	n/a	n/a
41	CTCF	chr3:85353597-85353763	A549	lung:	n/a	chr3:85353708-85353718 chr3:85353704-85353720 chr3:85353706-85353715 chr3:85353705-85353726 chr3:85353703-85353721
42	CTCF	chr3:85409900-85410050	GM12870	blood:	n/a	n/a
43	CTCF	chr3:85409970-85410227	K562	blood:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
44	CTCF	chr3:85410040-85410190	NHEK	skin:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
45	CTCF	chr3:85392240-85392390	GM12864	blood:	n/a	n/a
46	CTCF	chr3:85410040-85410190	GM12878	blood:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
47	CTCF	chr3:85409940-85410090	HAc	cerebellar:	n/a	n/a
48	CTCF	chr3:85409980-85410130	A549	lung:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
49	CTCF	chr3:85410020-85410170	GM12867	blood:	n/a	chr3:85410104-85410122 chr3:85410112-85410120 chr3:85410111-85410119 chr3:85410099-85410120 chr3:85410106-85410119
50	CTCF	chr3:85353660-85353810	HMF	breast:	n/a	chr3:85353708-85353718 chr3:85353704-85353720 chr3:85353706-85353715 chr3:85353705-85353726 chr3:85353703-85353721

No.	Distal block	Cell Line	Cell type
1	chr3:85353354..85354461-chr3:85391496..85392792,4	MCF-7	breast:
2	chr3:85364029..85366181-chr3:85371658..85373734,2	K562	blood:
3	chr3:85353629..85354290-chr3:85624959..85625479,2	K562	blood:
4	chr3:85353413..85354226-chr3:85409666..85410591,2	MCF-7	breast:
5	chr3:84597130..84597691-chr3:85409635..85410581,3	MCF-7	breast:
6	chr3:85353254..85353869-chr3:85625261..85626043,2	MCF-7	breast:
7	chr3:85409636..85410536-chr3:85624933..85625875,2	MCF-7	breast:
8	chr3:85439579..85441215-chr3:85551442..85553756,2	K562	blood:
9	chr3:85353291..85354669-chr3:85409554..85410988,3	K562	blood:
10	chr3:85023240..85023756-chr3:85409642..85410352,2	MCF-7	breast:
11	chr3:85454106..85456659-chr3:85459742..85462489,2	K562	blood:
12	chr3:85455981..85458898-chr3:85554544..85556051,2	K562	blood:
13	chr3:85353354..85354461-chr3:85391496..85392792,4	MCF-7	breast:
14	chr3:85448906..85450732-chr3:85454290..85457141,2	K562	blood:
15	chr3:85454106..85456659-chr3:85459742..85462489,2	K562	blood:
16	chr3:85353413..85354226-chr3:85409666..85410591,2	MCF-7	breast:
17	chr3:85448906..85450732-chr3:85454290..85457141,2	K562	blood:
18	chr3:85401815..85404016-chr3:85405205..85407101,2	K562	blood:
19	chr3:85453248..85455514-chr3:85462247..85464334,2	K562	blood:
20	chr3:85457628..85458566-chr3:130193477..130193997,2	MCF-7	breast:
21	chr3:84992684..84993232-chr3:85391799..85392321,2	MCF-7	breast:
22	chr3:85353291..85354669-chr3:85409554..85410988,3	K562	blood:
23	chr3:85401815..85404016-chr3:85405205..85407101,2	K562	blood:
24	chr3:85353497..85354172-chr3:85624891..85625399,2	MCF-7	breast:
25	chr3:85364029..85366181-chr3:85371658..85373734,2	K562	blood:
26	chr3:85425596..85428443-chr3:85428590..85430282,2	K562	blood:
27	chr3:85425596..85428443-chr3:85428590..85430282,2	K562	blood:

miRNA name	Chromosome Location	mirBase accession
hsa-miR-5688	chr3:85434911-85434932	MIMAT0022479

Variant related genes	Relation type
MIR5688	TF binding region

Extended variants
information (count: 3975 )
Associated
traits (count: 80 )

Variant overlapped rSNPs/rCNVs (count:3975 , 50 per page) page: 1 2 3 4 5 6 7 ... 80

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs557418091	chr3:85307027-85307028	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs575691975	chr3:85307032-85307033	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs183231263	chr3:85307046-85307047	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs554983549	chr3:85307089-85307090	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs573436617	chr3:85307094-85307095	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs540478152	chr3:85307103-85307104	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs565466351	chr3:85307124-85307125	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs532932530	chr3:85307144-85307145	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs145177019	chr3:85307195-85307196	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs116064558	chr3:85307247-85307248	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs186889956	chr3:85307261-85307262	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs372665716	chr3:85307284-85307285	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs548544281	chr3:85307322-85307323	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs567454391	chr3:85307346-85307347	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs566434825	chr3:85307400-85307401	Enhancers Flanking Active TSS Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs528349401	chr3:85307423-85307424	Enhancers Flanking Active TSS Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs371417517	chr3:85307466-85307467	Enhancers Flanking Active TSS Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs546520252	chr3:85307547-85307548	Enhancers Flanking Active TSS Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs571396893	chr3:85307575-85307576	Enhancers Flanking Active TSS Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs61360620	chr3:85307611-85307612	Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs62250654	chr3:85307649-85307650	Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs201419422	chr3:85307651-85307652	Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs376895181	chr3:85307733-85307734	Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs539168332	chr3:85307764-85307765	Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs557503891	chr3:85307765-85307766	Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs7635331	chr3:85307793-85307794	Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs147588848	chr3:85307801-85307802	Enhancers Active TSS Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs13089063	chr3:85307817-85307818	Enhancers Active TSS Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs9835616	chr3:85307824-85307825	Enhancers Active TSS Flanking Active TSS Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs536649747	chr3:85307845-85307846	Enhancers Active TSS Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs80351312	chr3:85307872-85307873	Enhancers Active TSS Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs112714834	chr3:85307928-85307929	Enhancers Active TSS Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs143034964	chr3:85307952-85307953	Enhancers Active TSS Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs7635613	chr3:85307961-85307962	Enhancers Active TSS Flanking Active TSS Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs577008892	chr3:85307967-85307968	Enhancers Active TSS Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs74674528	chr3:85307981-85307982	Enhancers Active TSS Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs563065443	chr3:85308024-85308025	Enhancers Flanking Active TSS Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs574950377	chr3:85308049-85308050	Enhancers Flanking Active TSS Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs542228074	chr3:85308088-85308089	Enhancers Flanking Active TSS Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs560931015	chr3:85308095-85308096	Enhancers Flanking Active TSS Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs182779309	chr3:85308111-85308112	Enhancers Flanking Active TSS Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs368380837	chr3:85308139-85308140	Enhancers Flanking Active TSS Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs546854921	chr3:85308169-85308170	Enhancers Flanking Active TSS Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs564996859	chr3:85308170-85308171	Enhancers Flanking Active TSS Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs532365990	chr3:85308179-85308180	Enhancers Flanking Active TSS Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs550745966	chr3:85308285-85308286	Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs569383048	chr3:85308298-85308299	Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs188146545	chr3:85308334-85308335	Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
49	rs112214395	chr3:85308346-85308347	Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
50	rs568221899	chr3:85308365-85308366	Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:80)

Disease	PMID	Source
Glioblastoma multiforme	21080181	CNVD
Melanoma	18172304	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Acute myeloid leukemia	20729466	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Metanephric adenoma	20802469	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Wilms tumour	21544195	CNVD
Colorectal cancer	16272173	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Soft tissue tumor	16732325	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
Neurodevelopmental disorder	22521361	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Mental retardation	17124404	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
craniofacial dysmorphism	21918468	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Autism	22102821	CNVD
Prostate cancer	21307934	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:304 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:85288400-85307600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr3:85303000-85308200	Weak transcription	Brain Germinal Matrix	brain
3	chr3:85304200-85307200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr3:85304400-85307600	Weak transcription	Brain Cingulate Gyrus	brain
5	chr3:85304600-85307200	Weak transcription	Brain Angular Gyrus	brain
6	chr3:85305000-85307200	Weak transcription	Brain Anterior Caudate	brain
7	chr3:85305400-85307200	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr3:85305600-85307200	Weak transcription	Brain Substantia Nigra	brain
9	chr3:85307000-85307400	Enhancers	Brain Hippocampus Middle	brain
10	chr3:85307200-85307400	Enhancers	Cortex derived primary cultured neurospheres	brain
11	chr3:85307200-85307400	Enhancers	Brain Anterior Caudate	brain
12	chr3:85307200-85307600	Enhancers	Brain Angular Gyrus	brain
13	chr3:85307200-85307600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
14	chr3:85307200-85307600	Enhancers	Brain Substantia Nigra	brain
15	chr3:85307200-85307600	Enhancers	Fetal Brain Female	brain
16	chr3:85307200-85309000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr3:85307400-85307600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
18	chr3:85307400-85307600	Flanking Active TSS	Brain Hippocampus Middle	brain
19	chr3:85307400-85308400	Active TSS	Brain Anterior Caudate	brain
20	chr3:85307400-85309200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr3:85307600-85307800	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr3:85307600-85308000	Active TSS	Cortex derived primary cultured neurospheres	brain
23	chr3:85307600-85308200	Active TSS	Brain Cingulate Gyrus	brain
24	chr3:85307600-85308200	Active TSS	Fetal Brain Female	brain
25	chr3:85307600-85308400	Active TSS	Brain Angular Gyrus	brain
26	chr3:85307600-85308400	Active TSS	Brain Hippocampus Middle	brain
27	chr3:85307600-85308400	Active TSS	Brain Inferior Temporal Lobe	brain
28	chr3:85307600-85308400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
29	chr3:85307600-85308400	Active TSS	Brain Substantia Nigra	brain
30	chr3:85307600-85309200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr3:85307800-85308200	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr3:85308000-85308200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
33	chr3:85308000-85308400	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
34	chr3:85308200-85308400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
35	chr3:85308200-85308400	Flanking Active TSS	Brain Cingulate Gyrus	brain
36	chr3:85308200-85308400	Enhancers	Fetal Brain Female	brain
37	chr3:85308200-85309200	Enhancers	Brain Germinal Matrix	brain
38	chr3:85308400-85308600	Weak transcription	Brain Substantia Nigra	brain
39	chr3:85308400-85308800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
40	chr3:85308400-85309600	Weak transcription	Brain Angular Gyrus	brain
41	chr3:85308400-85309800	Weak transcription	Brain Anterior Caudate	brain
42	chr3:85308400-85310000	Enhancers	Cortex derived primary cultured neurospheres	brain
43	chr3:85308600-85310000	Enhancers	Brain Substantia Nigra	brain
44	chr3:85308800-85309000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
45	chr3:85308800-85309000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
46	chr3:85309600-85310200	Enhancers	Brain Angular Gyrus	brain
47	chr3:85309800-85310000	Enhancers	Brain Anterior Caudate	brain
48	chr3:85319800-85320200	Enhancers	Fetal Lung	lung
49	chr3:85320200-85320600	Weak transcription	Fetal Lung	lung
50	chr3:85320600-85320800	Enhancers	Fetal Lung	lung

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