Variant report

Variant	nsv1019919
Chromosome Location	chr6:151028969-151161789
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1655)
CpG islands
(count:917)
Chromatin interactive
region (count:64)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1655 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:151139002-151139246	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:151136249-151136581	HepG2	liver:	n/a	n/a
3	ATF1	chr6:151149402-151149532	K562	blood:	n/a	n/a
4	ATF1	chr6:151134506-151134604	K562	blood:	n/a	n/a
5	ATF2	chr6:151041631-151042470	GM12878	blood:	n/a	n/a
6	ATF2	chr6:151134290-151135704	GM12878	blood:	n/a	n/a
7	ATF2	chr6:151041628-151042357	GM12878	blood:	n/a	n/a
8	ATF2	chr6:151134349-151135581	GM12878	blood:	n/a	n/a
9	ATF2	chr6:151136092-151136523	GM12878	blood:	n/a	n/a
10	ATF2	chr6:151041892-151042345	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF2	chr6:151136176-151136623	GM12878	blood:	n/a	n/a
12	ATF2	chr6:151067079-151067508	GM12878	blood:	n/a	n/a
13	ATF3	chr6:151055428-151055660	K562	blood:	n/a	chr6:151055497-151055510
14	ATF3	chr6:151032955-151033247	K562	blood:	n/a	n/a
15	BACH1	chr6:151041969-151042422	H1-hESC	embryonic stem cell:	n/a	n/a
16	BACH1	chr6:151038649-151038846	H1-hESC	embryonic stem cell:	n/a	n/a
17	BACH1	chr6:151091268-151091361	K562	blood:	n/a	n/a
18	BATF	chr6:151097477-151097677	GM12878	blood:	n/a	n/a
19	BATF	chr6:151137695-151137971	GM12878	blood:	n/a	n/a
20	BATF	chr6:151054160-151054603	GM12878	blood:	n/a	chr6:151054382-151054393
21	BATF	chr6:151134709-151135510	GM12878	blood:	n/a	n/a
22	BATF	chr6:151041908-151042238	GM12878	blood:	n/a	n/a
23	BATF	chr6:151134409-151134708	GM12878	blood:	n/a	chr6:151134542-151134555
24	BATF	chr6:151054228-151054608	GM12878	blood:	n/a	chr6:151054382-151054393
25	BATF	chr6:151041866-151042325	GM12878	blood:	n/a	n/a
26	BATF	chr6:151134376-151135607	GM12878	blood:	n/a	chr6:151134542-151134555
27	BCL11A	chr6:151134378-151135479	GM12878	blood:	n/a	n/a
28	BCL11A	chr6:151134504-151134983	GM12878	blood:	n/a	n/a
29	BCL11A	chr6:151097397-151098059	GM12878	blood:	n/a	n/a
30	BCL11A	chr6:151041780-151042301	GM12878	blood:	n/a	chr6:151041809-151041818
31	BCL11A	chr6:151054225-151054638	GM12878	blood:	n/a	n/a
32	BCL11A	chr6:151041649-151042274	GM12878	blood:	n/a	chr6:151041809-151041818
33	BCL11A	chr6:151098165-151098856	GM12878	blood:	n/a	n/a
34	BCL11A	chr6:151135080-151135369	GM12878	blood:	n/a	n/a
35	BCL3	chr6:151097924-151098379	GM12878	blood:	n/a	n/a
36	BCL3	chr6:151097787-151098317	GM12878	blood:	n/a	n/a
37	BCL3	chr6:151098505-151098761	GM12878	blood:	n/a	n/a
38	BCL3	chr6:151098793-151099139	GM12878	blood:	n/a	n/a
39	BCL3	chr6:151041824-151042332	GM12878	blood:	n/a	n/a
40	BCL3	chr6:151097277-151097531	GM12878	blood:	n/a	chr6:151097290-151097299
41	BCL3	chr6:151134364-151135587	GM12878	blood:	n/a	n/a
42	BCLAF1	chr6:151041660-151042444	GM12878	blood:	n/a	chr6:151041809-151041818
43	BCLAF1	chr6:151134334-151135339	GM12878	blood:	n/a	n/a
44	BCLAF1	chr6:151041834-151042334	GM12878	blood:	n/a	n/a
45	BCLAF1	chr6:151134409-151135511	GM12878	blood:	n/a	n/a
46	BHLHE40	chr6:151068426-151068588	K562	blood:	n/a	chr6:151068461-151068474 chr6:151068462-151068471 chr6:151068463-151068472 chr6:151068457-151068478 chr6:151068463-151068472
47	BHLHE40	chr6:151054234-151054667	GM12878	blood:	n/a	n/a
48	BHLHE40	chr6:151086150-151086970	GM12878	blood:	n/a	n/a
49	BHLHE40	chr6:151041555-151042349	GM12878	blood:	n/a	n/a
50	BHLHE40	chr6:151134493-151135584	GM12878	blood:	n/a	n/a

(count:917 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:151034239-151034289	HCM	heart:	n/a
2	chr6:151075493-151075543	ovcar-3	ovarian:	n/a
3	chr6:151034239-151034289	HCM	heart:	n/a
4	chr6:151075493-151075543	ovcar-3	ovarian:	n/a
5	chr6:151125885-151125935	NH-A	brain:	n/a
6	chr6:151152826-151152876	ECC-1	luminal epithelium:	n/a
7	chr6:151125885-151125935	SKMC	muscle:	n/a
8	chr6:151134876-151134926	MCF10A-Er-Src	breast:	n/a
9	chr6:151042035-151042085	Caco-2	colon:	n/a
10	chr6:151042035-151042085	ovcar-3	ovarian:	n/a
11	chr6:151152826-151152876	GM12892	blood:	n/a
12	chr6:151054883-151054933	PANC-1	pancreas:	n/a
13	chr6:151034239-151034289	ECC-1	luminal epithelium:	n/a
14	chr6:151055105-151055155	K562	blood:	n/a
15	chr6:151125848-151125898	PANC-1	pancreas:	n/a
16	chr6:151152826-151152876	BE2_C	brain:	n/a
17	chr6:151042035-151042085	PANC-1	pancreas:	n/a
18	chr6:151125848-151125898	U87	brain:	n/a
19	chr6:151075493-151075543	HMEC	breast:	n/a
20	chr6:151152826-151152876	NB4	blood:	n/a
21	chr6:151055105-151055155	SAEC	small airway:	n/a
22	chr6:151152826-151152876	AG04450	lung:	fetal
23	chr6:151087821-151087871	HPAEpiC	pulmonary alveolar:	n/a
24	chr6:151125848-151125898	MCF10A-Er-Src	breast:	n/a
25	chr6:151125848-151125898	AG09309	skin:	n/a
26	chr6:151121916-151121966	PFSK-1	brain:	n/a
27	chr6:151054883-151054933	SAEC	small airway:	n/a
28	chr6:151125869-151125919	AG09319	gingival:	n/a
29	chr6:151152916-151152966	HCT-116	colon:	n/a
30	chr6:151055105-151055155	SK-N-SH	brain:	n/a
31	chr6:151075493-151075543	GM12892	blood:	n/a
32	chr6:151108748-151108798	BE2_C	brain:	n/a
33	chr6:151034239-151034289	AoSMC	blood vessel:	n/a
34	chr6:151121916-151121966	AG10803	skin:	n/a
35	chr6:151055105-151055155	CMK	blood:	n/a
36	chr6:151125869-151125919	GM19239	blood:	n/a
37	chr6:151134876-151134926	GM12878	blood:	n/a
38	chr6:151054883-151054933	HepG2	liver:	n/a
39	chr6:151121916-151121966	AoSMC	blood vessel:	n/a
40	chr6:151034239-151034289	BJ	skin:	n/a
41	chr6:151134876-151134926	NT2-D1	testis:	n/a
42	chr6:151055105-151055155	GM12892	blood:	n/a
43	chr6:151055012-151055062	HIPEpiC	eye:	n/a
44	chr6:151034239-151034289	HCPEpiC	choroid plexus:	n/a
45	chr6:151075493-151075543	A549	lung:	n/a
46	chr6:151125848-151125898	Hela-S3	cervix:	n/a
47	chr6:151152826-151152876	Hepatocyte	liver:	n/a
48	chr6:151152826-151152876	HRPEpiC	eye:	n/a
49	chr6:151152916-151152966	HEK293	kidney:	embryo
50	chr6:151034239-151034289	HRPEpiC	eye:	n/a

(count:64 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:151138165..151140084-chr6:151148718..151151192,2	MCF-7	breast:
2	chr6:151155087..151157743-chr6:151183698..151185369,2	MCF-7	breast:
3	chr6:151031833..151034692-chr6:151036440..151039323,2	MCF-7	breast:
4	chr6:151136480..151138670-chr6:151645259..151647144,2	K562	blood:
5	chr6:151086969..151088528-chr6:151093504..151095513,2	MCF-7	breast:
6	chr6:150739007..150740606-chr6:151135993..151137184,5	MCF-7	breast:
7	chr6:151032065..151034026-chr6:151038847..151040382,2	K562	blood:
8	chr6:150735006..150737678-chr6:151094052..151096200,2	K562	blood:
9	chr6:150993621..150995744-chr6:151052109..151054266,2	K562	blood:
10	chr6:150255167..150255937-chr6:151135965..151136964,2	K562	blood:
11	chr6:151159771..151161419-chr6:151175502..151177394,2	MCF-7	breast:
12	chr6:151032065..151034026-chr6:151038847..151040382,2	K562	blood:
13	chr6:151153046..151154713-chr6:151157875..151159703,2	MCF-7	breast:
14	chr6:151006847..151007653-chr6:151136348..151136865,2	MCF-7	breast:
15	chr6:150737527..150738078-chr6:151135893..151136531,2	K562	blood:
16	chr6:151029067..151031162-chr6:151034859..151036741,2	MCF-7	breast:
17	chr6:151154318..151157148-chr6:151185615..151188012,2	K562	blood:
18	chr6:150739022..150740801-chr6:151062707..151063998,9	MCF-7	breast:
19	chr6:151145621..151147412-chr6:151159336..151161686,2	MCF-7	breast:
20	chr6:151149780..151152381-chr6:151155594..151157926,2	K562	blood:
21	chr6:151127761..151129829-chr6:151251193..151252887,2	K562	blood:
22	chr6:150739101..150740605-chr6:151135391..151136891,7	MCF-7	breast:
23	chr6:150739275..150740853-chr6:151135613..151137022,11	K562	blood:
24	chr6:151073651..151077490-chr6:151086273..151089717,3	K562	blood:
25	chr6:151139331..151140899-chr6:151185923..151189126,3	MCF-7	breast:
26	chr6:151063005..151064688-chr6:151071263..151072957,2	MCF-7	breast:
27	chr6:151153671..151156163-chr6:151157225..151159123,2	MCF-7	breast:
28	chr6:151149448..151151483-chr6:151185992..151187745,2	MCF-7	breast:
29	chr6:151073651..151077490-chr6:151086273..151089717,3	K562	blood:
30	chr6:151040854..151046564-chr6:151048861..151051193,5	MCF-7	breast:
31	chr6:151138593..151139564-chr6:151645334..151646258,4	K562	blood:
32	chr6:150739018..150739537-chr6:151138886..151139620,2	MCF-7	breast:
33	chr6:151152815..151155809-chr6:151157683..151162194,4	K562	blood:
34	chr6:151121455..151123366-chr6:151125509..151127988,2	K562	blood:
35	chr6:150738306..150738871-chr6:151135977..151136495,2	MCF-7	breast:
36	chr6:151121455..151124802-chr6:151125509..151127988,3	K562	blood:
37	chr6:151037443..151040064-chr6:151041020..151043133,2	MCF-7	breast:
38	chr6:151041900..151044113-chr6:151046399..151049223,3	MCF-7	breast:
39	chr6:151139003..151139647-chr6:151655733..151656276,2	MCF-7	breast:
40	chr6:151063005..151064688-chr6:151071263..151072957,2	MCF-7	breast:
41	chr6:151151218..151153741-chr6:151185879..151188276,2	K562	blood:
42	chr6:151155676..151157561-chr6:151159088..151161071,2	MCF-7	breast:
43	chr6:151077320..151079270-chr6:151081214..151083626,2	K562	blood:
44	chr6:151152815..151155809-chr6:151157683..151162194,4	K562	blood:
45	chr6:151121455..151124802-chr6:151125509..151127988,3	K562	blood:
46	chr6:151153046..151154713-chr6:151157875..151159703,2	MCF-7	breast:
47	chr6:151029067..151031162-chr6:151034859..151036741,2	MCF-7	breast:
48	chr6:151006793..151007729-chr6:151062617..151063276,4	MCF-7	breast:
49	chr6:151138906..151139676-chr6:151655614..151656247,2	MCF-7	breast:
50	chr6:151139156..151142341-chr6:151184853..151188389,3	K562	blood:

No data

Variant related genes	Relation type
PDCL3P5	TF binding region
PLEKHG1	TF binding region
PDCL3P5	CpG island
PLEKHG1	CpG island
ENSG00000131016	chromatin interactions
ENSG00000120254	chromatin interactions
ENSG00000216621	chromatin interactions
ENSG00000213089	chromatin interactions
ENSG00000120278	chromatin interactions

Extended variants
information (count: 5459 )
Associated
traits (count: 86 )

Variant overlapped rSNPs/rCNVs (count:5459 , 50 per page) page: 1 2 3 4 5 6 7 ... 110

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs532646887	chr6:151028982-151028983	Enhancers Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs182141263	chr6:151028986-151028987	Enhancers Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs540630229	chr6:151028990-151028991	Enhancers Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs144630907	chr6:151029068-151029069	Enhancers Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs117432534	chr6:151029072-151029073	Enhancers Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs549442632	chr6:151029090-151029091	Enhancers Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs9371193	chr6:151029109-151029110	Enhancers Weak transcription Genic enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs531754787	chr6:151029112-151029113	Enhancers Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs553933348	chr6:151029119-151029120	Enhancers Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs551579793	chr6:151029142-151029143	Enhancers Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs571799643	chr6:151029208-151029209	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs187061465	chr6:151029229-151029230	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs540724155	chr6:151029290-151029291	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs112558239	chr6:151029317-151029318	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs567632557	chr6:151029318-151029319	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs9478788	chr6:151029339-151029340	Weak transcription Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs191564506	chr6:151029397-151029398	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs556662808	chr6:151029522-151029523	Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs576633803	chr6:151029529-151029530	Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs118099753	chr6:151029634-151029635	Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs79643762	chr6:151029651-151029652	Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs572187314	chr6:151029682-151029683	Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs541314725	chr6:151029779-151029780	Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs62434146	chr6:151029849-151029850	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs529625590	chr6:151029908-151029909	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs141653565	chr6:151029926-151029927	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs146234614	chr6:151029963-151029964	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs184342469	chr6:151030028-151030029	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs7772795	chr6:151030107-151030108	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs139148618	chr6:151030108-151030109	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs571799482	chr6:151030110-151030111	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs188497155	chr6:151030145-151030146	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs548057589	chr6:151030195-151030196	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs567977581	chr6:151030198-151030199	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs149525693	chr6:151030227-151030228	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs370824274	chr6:151030244-151030245	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs556601569	chr6:151030266-151030267	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs144130415	chr6:151030325-151030326	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs539125613	chr6:151030419-151030420	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs541762601	chr6:151030428-151030429	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs558831703	chr6:151030480-151030481	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs572184329	chr6:151030505-151030506	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs576192273	chr6:151030596-151030597	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs534549833	chr6:151030609-151030610	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs375544591	chr6:151030619-151030620	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs554813962	chr6:151030646-151030647	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs574412501	chr6:151030796-151030797	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs562062769	chr6:151030850-151030851	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs542964780	chr6:151030859-151030860	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs148702334	chr6:151030893-151030894	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:86)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Autism	22495311	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
Gastric cancer	17908304	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
Renal cell carcinoma	18592004	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Malignant melanoma	17260012	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Soft tissue tumor	16732325	CNVD
Burkitt''s lymphoma	19759907	CNVD
Esophageal cancer	21851588	CNVD
Cancer	17160897	CNVD
Breast cancer	17417639	CNVD
Breast cancer	17850661	CNVD
Renal cell carcinoma	18765545	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21804112	CNVD
Myelofibrosis	22110671	CNVD
Ovarian neoplasms	16753589	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20556506	CNVD
Hirschsprung''s Disease	21712996	CNVD
Testicular germ cell tumor	18059402	CNVD
Developmental delay	21147756	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Breast cancer	22522925	CNVD
Cancer	20164919	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:2314 , 50 per page) page: 1 2 3 4 5 6 7 ... 47

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:151015200-151033200	Weak transcription	Right Atrium	heart
2	chr6:151017600-151029200	Weak transcription	Lung	lung
3	chr6:151019000-151033000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr6:151019000-151033200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr6:151019000-151035200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr6:151021400-151029000	Weak transcription	Left Ventricle	heart
7	chr6:151021600-151033000	Weak transcription	Fetal Stomach	stomach
8	chr6:151021600-151040600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr6:151024200-151034200	Weak transcription	Right Ventricle	heart
10	chr6:151024400-151032800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr6:151025400-151029000	Weak transcription	Primary monocytes fromperipheralblood	blood
12	chr6:151025400-151029000	Weak transcription	Monocytes-CD14+_RO01746	blood
13	chr6:151025600-151033200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr6:151025800-151031400	Weak transcription	Esophagus	oesophagus
15	chr6:151026000-151029000	Weak transcription	Brain Anterior Caudate	brain
16	chr6:151026000-151030800	Weak transcription	Stomach Mucosa	stomach
17	chr6:151026000-151033600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr6:151026200-151031200	Weak transcription	Rectal Mucosa Donor 31	rectum
19	chr6:151026400-151031000	Weak transcription	Rectal Mucosa Donor 29	rectum
20	chr6:151026800-151029000	Weak transcription	Fetal Muscle Leg	muscle
21	chr6:151026800-151033200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
22	chr6:151026800-151043600	Weak transcription	Fetal Muscle Trunk	muscle
23	chr6:151027000-151033200	Weak transcription	Fetal Intestine Small	intestine
24	chr6:151027200-151033000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
25	chr6:151027400-151033200	Weak transcription	Fetal Kidney	kidney
26	chr6:151028400-151029400	Enhancers	Fetal Thymus	thymus
27	chr6:151028400-151029800	Genic enhancers	Primary B cells from cord blood	blood
28	chr6:151028600-151029000	Enhancers	Primary B cells from peripheral blood	blood
29	chr6:151028600-151029000	Enhancers	Small Intestine	intestine
30	chr6:151028600-151029200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr6:151028600-151029200	Enhancers	Fetal Lung	lung
32	chr6:151028600-151029200	Strong transcription	Thymus	Thymus
33	chr6:151028600-151029400	Enhancers	Brain Inferior Temporal Lobe	brain
34	chr6:151028600-151029400	Enhancers	Placenta	Placenta
35	chr6:151028600-151029400	Enhancers	Sigmoid Colon	Sigmoid Colon
36	chr6:151028600-151029400	Enhancers	Skeletal Muscle Male	skeletal muscle
37	chr6:151028600-151029600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
38	chr6:151028600-151029600	Genic enhancers	Spleen	Spleen
39	chr6:151028600-151029800	Enhancers	Adipose Nuclei	Adipose
40	chr6:151028800-151029600	Enhancers	Primary hematopoietic stem cells short term culture	blood
41	chr6:151029000-151029400	Enhancers	Primary monocytes fromperipheralblood	blood
42	chr6:151029000-151029400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
43	chr6:151029000-151029400	Enhancers	Fetal Muscle Leg	muscle
44	chr6:151029000-151029600	Enhancers	Brain Anterior Caudate	brain
45	chr6:151029000-151029600	Enhancers	Left Ventricle	heart
46	chr6:151029000-151029600	Enhancers	Monocytes-CD14+_RO01746	blood
47	chr6:151029000-151030000	Genic enhancers	Primary B cells from peripheral blood	blood
48	chr6:151029000-151033000	Weak transcription	Small Intestine	intestine
49	chr6:151029200-151029600	Enhancers	Lung	lung
50	chr6:151029200-151031400	Weak transcription	Thymus	Thymus

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links