Variant report

Variant	nsv1020680
Chromosome Location	chr7:3125512-3204521
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:961)
CpG islands
(count:489)
Chromatin interactive
region (count:29)
LncRNA
region (count:21)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:961 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:3203948-3204296	HepG2	liver:	n/a	n/a
2	ARID3A	chr7:3186430-3186815	K562	blood:	n/a	n/a
3	ATF1	chr7:3174282-3174626	K562	blood:	n/a	n/a
4	ATF2	chr7:3132072-3132548	GM12878	blood:	n/a	n/a
5	ATF2	chr7:3131973-3132406	GM12878	blood:	n/a	n/a
6	BACH1	chr7:3186439-3186846	K562	blood:	n/a	n/a
7	BACH1	chr7:3186456-3186829	H1-hESC	embryonic stem cell:	n/a	n/a
8	BATF	chr7:3132066-3132400	GM12878	blood:	n/a	n/a
9	BATF	chr7:3134880-3135174	GM12878	blood:	n/a	n/a
10	BATF	chr7:3146117-3146438	GM12878	blood:	n/a	n/a
11	BATF	chr7:3192746-3193040	GM12878	blood:	n/a	chr7:3192912-3192923
12	BATF	chr7:3146112-3146482	GM12878	blood:	n/a	n/a
13	BCL11A	chr7:3192760-3193070	GM12878	blood:	n/a	chr7:3192915-3192924 chr7:3192916-3192925
14	BCL11A	chr7:3192749-3193044	GM12878	blood:	n/a	chr7:3192915-3192924 chr7:3192916-3192925
15	BCL3	chr7:3146180-3146433	GM12878	blood:	n/a	n/a
16	BCLAF1	chr7:3134618-3134970	GM12878	blood:	n/a	n/a
17	BCLAF1	chr7:3194415-3194858	GM12878	blood:	n/a	n/a
18	BHLHE40	chr7:3168549-3168710	K562	blood:	n/a	chr7:3168685-3168694 chr7:3168679-3168700 chr7:3168683-3168696 chr7:3168686-3168695 chr7:3168685-3168694
19	BHLHE40	chr7:3126085-3126131	K562	blood:	n/a	n/a
20	BHLHE40	chr7:3132108-3132440	GM12878	blood:	n/a	n/a
21	BHLHE40	chr7:3186430-3186949	K562	blood:	n/a	n/a
22	BRCA1	chr7:3191484-3191701	GM12878	blood:	n/a	n/a
23	CCNT2	chr7:3186464-3186878	K562	blood:	n/a	chr7:3186464-3186473
24	CEBPB	chr7:3153488-3153627	A549	lung:	n/a	chr7:3153567-3153578
25	CEBPB	chr7:3186407-3186786	K562	blood:	n/a	n/a
26	CEBPB	chr7:3178482-3178985	K562	blood:	n/a	n/a
27	CEBPB	chr7:3186370-3186914	A549	lung:	n/a	n/a
28	CEBPB	chr7:3174341-3174612	K562	blood:	n/a	n/a
29	CEBPB	chr7:3168058-3168534	MCF-7	breast:	n/a	chr7:3168316-3168327
30	CEBPB	chr7:3168207-3168382	HepG2	liver:	n/a	chr7:3168316-3168327
31	CEBPB	chr7:3153475-3153698	HepG2	liver:	n/a	chr7:3153567-3153578
32	CEBPB	chr7:3148437-3149086	MCF-7	breast:	n/a	n/a
33	CEBPB	chr7:3186997-3187012	K562	blood:	n/a	n/a
34	CHD2	chr7:3191510-3191704	K562	blood:	n/a	n/a
35	CHD2	chr7:3188625-3188930	K562	blood:	n/a	n/a
36	CHD2	chr7:3170188-3170489	K562	blood:	n/a	n/a
37	CHD2	chr7:3191548-3191696	GM12878	blood:	n/a	n/a
38	CREB1	chr7:3132031-3132499	GM12878	blood:	n/a	chr7:3132241-3132254
39	CREB1	chr7:3131965-3132570	GM12878	blood:	n/a	chr7:3132241-3132254
40	CTCF	chr7:3202042-3202172	GM12892	blood:	n/a	n/a
41	CTCF	chr7:3194620-3194770	AoAF	blood vessel:	n/a	n/a
42	CTCF	chr7:3194620-3194770	HEEpiC	esophagus:	n/a	n/a
43	CTCF	chr7:3202076-3202163	GM12891	blood:	n/a	n/a
44	CTCF	chr7:3132140-3132290	GM12873	blood:	n/a	n/a
45	CTCF	chr7:3197260-3197410	HPAF	blood vessel:	n/a	n/a
46	CTCF	chr7:3129260-3129410	NHDF-neo	bronchial:	n/a	chr7:3129314-3129323
47	CTCF	chr7:3132320-3132470	HBMEC	blood vessel:	n/a	chr7:3132354-3132367
48	CTCF	chr7:3202060-3202210	HVMF	connective:	n/a	n/a
49	CTCF	chr7:3129240-3129390	AG04450	lung:	n/a	chr7:3129314-3129323 chr7:3129243-3129252
50	CTCF	chr7:3129460-3129610	HepG2	liver:	n/a	n/a

(count:489 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:3186788-3186838	AG04449	skin:	fetal
2	chr7:3186788-3186838	AG04449	skin:	fetal
3	chr7:3134557-3134607	HCT-116	colon:	n/a
4	chr7:3186766-3186816	PANC-1	pancreas:	n/a
5	chr7:3186788-3186838	AG09309	skin:	n/a
6	chr7:3157722-3157772	SKMC	muscle:	n/a
7	chr7:3186788-3186838	A549	lung:	n/a
8	chr7:3127028-3127078	PANC-1	pancreas:	n/a
9	chr7:3157722-3157772	PrEC	prostate:	n/a
10	chr7:3134670-3134720	AG10803	skin:	n/a
11	chr7:3157722-3157772	HEK293	kidney:	embryo
12	chr7:3157722-3157772	ECC-1	luminal epithelium:	n/a
13	chr7:3186788-3186838	HepG2	liver:	n/a
14	chr7:3157722-3157772	HRCEpiC	kidney:	n/a
15	chr7:3186788-3186838	NB4	blood:	n/a
16	chr7:3134592-3134642	SKMC	muscle:	n/a
17	chr7:3186766-3186816	IMR90	lung:	fetal
18	chr7:3134557-3134607	PANC-1	pancreas:	n/a
19	chr7:3157722-3157772	Hela-S3	cervix:	n/a
20	chr7:3175091-3175141	Hela-S3	cervix:	n/a
21	chr7:3157722-3157772	AG09309	skin:	n/a
22	chr7:3186766-3186816	Caco-2	colon:	n/a
23	chr7:3134670-3134720	AG04450	lung:	fetal
24	chr7:3134670-3134720	PANC-1	pancreas:	n/a
25	chr7:3134592-3134642	Caco-2	colon:	n/a
26	chr7:3134557-3134607	PFSK-1	brain:	n/a
27	chr7:3157722-3157772	HCT-116	colon:	n/a
28	chr7:3127028-3127078	BE2_C	brain:	n/a
29	chr7:3186788-3186838	Jurkat	blood:	n/a
30	chr7:3186788-3186838	K562	blood:	n/a
31	chr7:3127028-3127078	HEK293	kidney:	embryo
32	chr7:3134557-3134607	SK-N-SH	brain:	n/a
33	chr7:3134592-3134642	HRE	kidney:	n/a
34	chr7:3127028-3127078	Hela-S3	cervix:	n/a
35	chr7:3175091-3175141	Hepatocyte	liver:	n/a
36	chr7:3186766-3186816	GM12892	blood:	n/a
37	chr7:3157722-3157772	HPAEpiC	pulmonary alveolar:	n/a
38	chr7:3186788-3186838	LNCaP	prostate:	n/a
39	chr7:3175091-3175141	ECC-1	luminal epithelium:	n/a
40	chr7:3175091-3175141	GM12878	blood:	n/a
41	chr7:3186788-3186838	AG10803	skin:	n/a
42	chr7:3127028-3127078	T-47D	breast:	n/a
43	chr7:3134592-3134642	CMK	blood:	n/a
44	chr7:3134670-3134720	HRCEpiC	kidney:	n/a
45	chr7:3134592-3134642	AG09319	gingival:	n/a
46	chr7:3134557-3134607	BE2_C	brain:	n/a
47	chr7:3157722-3157772	HCF	heart:	n/a
48	chr7:3157722-3157772	BE2_C	brain:	n/a
49	chr7:3127028-3127078	SKMC	muscle:	n/a
50	chr7:3127028-3127078	AG09309	skin:	n/a

(count:29 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:3149067..3151848-chr7:3153141..3155558,2	K562	blood:
2	chr7:3104949..3105997-chr7:3194351..3195035,3	MCF-7	breast:
3	chr7:3140254..3142201-chr7:3143047..3144954,2	MCF-7	breast:
4	chr7:3153512..3155575-chr7:3157437..3160421,2	K562	blood:
5	chr7:3184853..3186673-chr7:3189363..3191376,2	K562	blood:
6	chr7:3172781..3176010-chr7:3179517..3182340,3	K562	blood:
7	chr7:3140254..3142201-chr7:3143047..3144954,2	MCF-7	breast:
8	chr11:108535309..108536048-chr7:3168253..3168776,2	HCT-116	colon:
9	chr7:3201417..3202351-chr7:3240242..3240878,3	MCF-7	breast:
10	chr7:2926599..2927259-chr7:3129024..3129578,2	MCF-7	breast:
11	chr7:3149067..3151848-chr7:3153141..3155558,2	K562	blood:
12	chr7:2925307..2926930-chr7:3193219..3196331,3	MCF-7	breast:
13	chr7:2904357..2905298-chr7:3194209..3195076,4	K562	blood:
14	chr7:2926262..2927534-chr7:3194238..3195613,6	MCF-7	breast:
15	chr7:3105046..3105933-chr7:3194248..3194999,3	K562	blood:
16	chr7:3184853..3186673-chr7:3189363..3191376,2	K562	blood:
17	chr7:2710484..2711053-chr7:3194317..3194955,2	K562	blood:
18	chr7:3148059..3150534-chr7:3151006..3152602,2	K562	blood:
19	chr7:3148059..3150534-chr7:3151006..3152602,2	K562	blood:
20	chr7:3154011..3155575-chr7:3158921..3161053,2	K562	blood:
21	chr7:3128837..3129871-chr7:3239803..3240577,4	MCF-7	breast:
22	chr7:2914055..2915867-chr7:3204506..3206043,2	MCF-7	breast:
23	chr7:3194510..3195232-chr7:3340158..3340723,2	MCF-7	breast:
24	chr7:3194262..3194922-chr7:3439333..3439841,2	MCF-7	breast:
25	chr7:3153512..3155575-chr7:3157437..3160421,2	K562	blood:
26	chr7:2913057..2915172-chr7:3198284..3201204,2	MCF-7	breast:
27	chr7:3105018..3105890-chr7:3193882..3195188,3	MCF-7	breast:
28	chr7:3172781..3176010-chr7:3179517..3182340,3	K562	blood:
29	chr7:3154011..3155575-chr7:3158921..3161053,2	K562	blood:

(count:21 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AC091801.1.1-1	chr7:3179828-3179930	XLOC_006339
2	lnc-AC091801.1.1-5	chr7:3157609-3157650	XLOC_006338
3	lnc-AC091801.1.1-5	chr7:3137040-3137347	XLOC_006338
4	lnc-AC091801.1.1-1	chr7:3197771-3197888	XLOC_006339
5	lnc-AC091801.1.1-5	chr7:3137039-3137347	NONHSAT118841
6	lnc-AC091801.1.1-8	chr7:3153155-3153431	ucscGeneNc_uc003smw_1
7	lnc-AC091801.1.1-8	chr7:3164297-3164414	ucscGeneNc_uc003smw_1
8	lnc-AC091801.1.1-8	chr7:3180756-3180813	ucscGeneNc_uc003smw_1
9	lnc-AC091801.1.1-5	chr7:3140655-3140688	NONHSAT118841
10	lnc-AC091801.1.1-1	chr7:3186629-3186905	NONHSAT118844
11	lnc-AC091801.1.1-8	chr7:3172190-3172290	ucscGeneNc_uc003smw_1
12	lnc-CARD11-4	chr7:3202784-3203088	NONHSAT118845
13	lnc-AC091801.1.1-5	chr7:3133765-3135219	XLOC_006338
14	lnc-AC091801.1.1-5	chr7:3140656-3140708	XLOC_006338
15	lnc-AC091801.1.1-1	chr7:3197771-3197975	XLOC_006339
16	lnc-CARD11-4	chr7:3204353-3204414	NONHSAT118845
17	lnc-AC091801.1.1-1	chr7:3186629-3186905	XLOC_006339
18	lnc-CARD11-4	chr7:3204171-3204221	NONHSAT118845
19	lnc-CARD11-1	chr7:3125986-3126055	XLOC_006337
20	lnc-AC091801.1.1-5	chr7:3140656-3140688	XLOC_006338
21	lnc-AC091801.1.1-5	chr7:3133765-3135219	XLOC_006338

No data

Variant related genes	Relation type
ENSG00000217455	TF binding region
ENSG00000228334	TF binding region
ENSG00000217455	CpG island
ENSG00000228334	CpG island
ENSG00000178105	chromatin interactions
PRKAB2	miRNA target sites
PTPN4	miRNA target sites
C3orf59	miRNA target sites
PLIN3	miRNA target sites

Extended variants
information (count: 4437 )
Associated
traits (count: 81 )

Variant overlapped rSNPs/rCNVs (count:4437 , 50 per page) page: 1 2 3 4 5 6 7 ... 89

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7782384	chr7:3125512-3125513	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs139875206	chr7:3125528-3125529	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs145393700	chr7:3125550-3125551	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs545144247	chr7:3125553-3125554	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs192204025	chr7:3125559-3125560	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs75476496	chr7:3125569-3125570	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs547745469	chr7:3125587-3125588	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs17150474	chr7:3125597-3125598	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs183659820	chr7:3125631-3125632	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs550403566	chr7:3125647-3125648	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs188281305	chr7:3125659-3125660	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs111930752	chr7:3125685-3125686	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs538729923	chr7:3125687-3125688	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs558718130	chr7:3125695-3125696	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs534526671	chr7:3125705-3125706	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs79687902	chr7:3125740-3125741	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs530030389	chr7:3125752-3125753	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs534631606	chr7:3125763-3125764	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs61214104	chr7:3125766-3125767	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs570499223	chr7:3125767-3125768	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs374865675	chr7:3125768-3125769	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs543166331	chr7:3125784-3125785	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs558948888	chr7:3125799-3125800	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs181804333	chr7:3125810-3125811	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs576666981	chr7:3125823-3125824	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs372773419	chr7:3125844-3125845	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs545078399	chr7:3125871-3125872	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs184851648	chr7:3125886-3125887	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs527653401	chr7:3125904-3125905	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs541425542	chr7:3125918-3125919	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs3736221	chr7:3125954-3125955	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs3736220	chr7:3125958-3125959	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs189835159	chr7:3126027-3126028	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
34	rs147242293	chr7:3126065-3126066	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs556326595	chr7:3126108-3126109	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs75255049	chr7:3126109-3126110	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs181963208	chr7:3126110-3126111	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs565782036	chr7:3126114-3126115	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs534280435	chr7:3126163-3126164	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs548169750	chr7:3126164-3126165	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs141052211	chr7:3126170-3126171	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs7795949	chr7:3126191-3126192	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs368619387	chr7:3126217-3126218	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs186249505	chr7:3126218-3126219	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs11767716	chr7:3126241-3126242	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs558743462	chr7:3126247-3126248	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs527453357	chr7:3126261-3126262	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs191484228	chr7:3126307-3126308	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs113503074	chr7:3126315-3126316	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs561328864	chr7:3126376-3126377	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:81)

Disease	PMID	Source
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Chordoma	21602918	CNVD
Lynch syndrome	22585707	CNVD
Follicular lymphoma	20505157	CNVD
Breast cancer	16397240	CNVD
Raine Syndrome	17924334	CNVD
Diffuse large b-cell lymphoma	21266526	CNVD
Melanoma	18172304	CNVD
Sudden cardiac death	19188705	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Glioma	18556773	CNVD
Ovarian cancer	21720365	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Ovarian cancer	22174824	CNVD
Urothelial carcinoma	18382360	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Developmental delay	21147756	CNVD
Prostate cancer	18632612	CNVD
Urothelial carcinoma	21177765	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Nasopharyngeal cancer	20548289	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Leukemia	23979775	CNVD
Spondylocostal dysostosis	21085971	CNVD
Mental retardation	17901693	CNVD
Heart disease	21282601	CNVD
Glioblastoma multiforme	22286061	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	17053054	CNVD
Cancer	20164920	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Schizophrenia	23813976	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:607 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:3123000-3130200	Weak transcription	Primary B cells from peripheral blood	blood
2	chr7:3123200-3126400	Weak transcription	Aorta	Aorta
3	chr7:3125000-3126600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr7:3126200-3126800	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr7:3126400-3126800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
6	chr7:3126400-3127000	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr7:3126400-3127000	Bivalent Enhancer	Placenta	Placenta
8	chr7:3126400-3127400	Enhancers	Aorta	Aorta
9	chr7:3126600-3126800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr7:3126600-3127400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr7:3126600-3127400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr7:3126600-3127400	Bivalent Enhancer	Fetal Stomach	stomach
13	chr7:3126600-3128000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr7:3126800-3127400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr7:3126800-3127600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr7:3126800-3127800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
17	chr7:3126800-3131000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr7:3127400-3128800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr7:3127800-3128000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
20	chr7:3128800-3129000	Enhancers	Esophagus	oesophagus
21	chr7:3128800-3129400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr7:3128800-3129600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr7:3128800-3129600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
24	chr7:3128800-3131400	Enhancers	Primary T helper naive cells from peripheral blood	blood
25	chr7:3128800-3131600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
26	chr7:3128800-3131600	Enhancers	Primary T killer memory cells from peripheral blood	blood
27	chr7:3128800-3132200	Enhancers	Primary T cells fromperipheralblood	blood
28	chr7:3128800-3134200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
29	chr7:3128800-3134400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
30	chr7:3129000-3131200	Enhancers	Primary T helper cells PMA-I stimulated	--
31	chr7:3129000-3131800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
32	chr7:3129000-3131800	Enhancers	Primary T helper cells fromperipheralblood	blood
33	chr7:3129200-3129400	Enhancers	Primary hematopoietic stem cells	blood
34	chr7:3129200-3129400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr7:3129200-3130600	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
36	chr7:3129200-3131800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
37	chr7:3129400-3129800	Enhancers	iPS-20b Cell Line	embryonic stem cell
38	chr7:3129400-3131400	Enhancers	Primary T cells from cord blood	blood
39	chr7:3129400-3134200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
40	chr7:3129600-3130600	Weak transcription	Primary hematopoietic stem cells	blood
41	chr7:3129600-3131200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr7:3129600-3132000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
43	chr7:3129600-3134600	Enhancers	Fetal Thymus	thymus
44	chr7:3130200-3134400	Enhancers	Primary B cells from peripheral blood	blood
45	chr7:3130200-3134400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
46	chr7:3130600-3130800	Enhancers	Duodenum Mucosa	Duodenum
47	chr7:3130600-3131000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
48	chr7:3130600-3133200	Enhancers	Primary hematopoietic stem cells	blood
49	chr7:3130600-3134200	Enhancers	Primary B cells from cord blood	blood
50	chr7:3130800-3131800	Weak transcription	Duodenum Mucosa	Duodenum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links