Variant report

Variant	nsv1021015
Chromosome Location	chr9:46587-370439
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3202)
CpG islands
(count:1832)
Chromatin interactive
region (count:136)
LncRNA
region (count:46)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3202 , 50 per page) page: 1 2 3 4 5 6 7 ... 65

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:237608-238477	K562	blood:	n/a	n/a
2	ARID3A	chr9:215966-216247	K562	blood:	n/a	n/a
3	ARID3A	chr9:336046-336405	HepG2	liver:	n/a	n/a
4	ARID3A	chr9:267916-268404	K562	blood:	n/a	n/a
5	ARID3A	chr9:214214-215154	K562	blood:	n/a	n/a
6	ARID3A	chr9:260270-260544	K562	blood:	n/a	n/a
7	ARID3A	chr9:250210-251866	K562	blood:	n/a	n/a
8	ARID3A	chr9:95057-95158	K562	blood:	n/a	n/a
9	ARID3A	chr9:210220-210873	K562	blood:	n/a	n/a
10	ARID3A	chr9:272758-273406	K562	blood:	n/a	chr9:273064-273079
11	ARID3A	chr9:229136-229466	K562	blood:	n/a	n/a
12	ARID3A	chr9:238911-239096	K562	blood:	n/a	n/a
13	ARID3A	chr9:94438-94633	K562	blood:	n/a	chr9:94582-94598
14	ARID3A	chr9:272095-272522	K562	blood:	n/a	n/a
15	ATF1	chr9:94435-94576	K562	blood:	n/a	n/a
16	ATF1	chr9:312958-313372	K562	blood:	n/a	n/a
17	ATF1	chr9:222266-222777	K562	blood:	n/a	n/a
18	ATF1	chr9:211078-211816	K562	blood:	n/a	n/a
19	ATF1	chr9:272150-272512	K562	blood:	n/a	n/a
20	ATF1	chr9:272781-273161	K562	blood:	n/a	n/a
21	ATF1	chr9:249153-249485	K562	blood:	n/a	n/a
22	ATF1	chr9:270753-271026	K562	blood:	n/a	n/a
23	ATF2	chr9:272677-273240	GM12878	blood:	n/a	n/a
24	ATF2	chr9:297286-297859	GM12878	blood:	n/a	n/a
25	ATF2	chr9:272650-273286	GM12878	blood:	n/a	n/a
26	ATF3	chr9:272081-272576	K562	blood:	n/a	n/a
27	ATF3	chr9:210212-210461	K562	blood:	n/a	n/a
28	ATF3	chr9:326568-327022	H1-hESC	embryonic stem cell:	n/a	n/a
29	BACH1	chr9:207498-207603	K562	blood:	n/a	n/a
30	BACH1	chr9:113631-113796	H1-hESC	embryonic stem cell:	n/a	n/a
31	BACH1	chr9:214910-215270	H1-hESC	embryonic stem cell:	n/a	n/a
32	BACH1	chr9:114203-114262	H1-hESC	embryonic stem cell:	n/a	n/a
33	BACH1	chr9:214677-214706	H1-hESC	embryonic stem cell:	n/a	n/a
34	BACH1	chr9:63102-63125	H1-hESC	embryonic stem cell:	n/a	n/a
35	BATF	chr9:185181-185422	GM12878	blood:	n/a	n/a
36	BATF	chr9:297422-297902	GM12878	blood:	n/a	chr9:297684-297695 chr9:297685-297695
37	BATF	chr9:184216-185020	GM12878	blood:	n/a	chr9:184501-184509
38	BATF	chr9:74615-74984	GM12878	blood:	n/a	n/a
39	BATF	chr9:164778-164998	GM12878	blood:	n/a	n/a
40	BATF	chr9:152906-153110	GM12878	blood:	n/a	chr9:152982-152993
41	BATF	chr9:63237-63452	GM12878	blood:	n/a	chr9:63315-63325
42	BATF	chr9:278668-278987	GM12878	blood:	n/a	n/a
43	BATF	chr9:160145-160379	GM12878	blood:	n/a	n/a
44	BATF	chr9:156635-156839	GM12878	blood:	n/a	n/a
45	BATF	chr9:185844-186146	GM12878	blood:	n/a	n/a
46	BATF	chr9:183636-184093	GM12878	blood:	n/a	n/a
47	BATF	chr9:178082-178323	GM12878	blood:	n/a	n/a
48	BATF	chr9:200387-200708	GM12878	blood:	n/a	chr9:200519-200530
49	BATF	chr9:88665-89067	GM12878	blood:	n/a	chr9:88843-88853 chr9:88842-88853
50	BATF	chr9:120835-121041	GM12878	blood:	n/a	n/a

(count:1832 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:72908-72958	Hepatocyte	liver:	n/a
2	chr9:114838-114888	HRCEpiC	kidney:	n/a
3	chr9:72908-72958	Hepatocyte	liver:	n/a
4	chr9:114838-114888	HRCEpiC	kidney:	n/a
5	chr9:273072-273122	HL-60	blood:	n/a
6	chr9:118530-118580	HRE	kidney:	n/a
7	chr9:112937-112987	HIPEpiC	eye:	n/a
8	chr9:168828-168878	NHBE	bronchial:	n/a
9	chr9:214612-214662	PrEC	prostate:	n/a
10	chr9:214268-214318	NT2-D1	testis:	n/a
11	chr9:118698-118748	HCT-116	colon:	n/a
12	chr9:114359-114409	MCF10A-Er-Src	breast:	n/a
13	chr9:114434-114484	HCM	heart:	n/a
14	chr9:73835-73885	Caco-2	colon:	n/a
15	chr9:273072-273122	NHDF-neo	bronchial:	n/a
16	chr9:176893-176943	HEK293	kidney:	embryo
17	chr9:118530-118580	GM12878	blood:	n/a
18	chr9:117044-117094	CMK	blood:	n/a
19	chr9:213650-213700	NT2-D1	testis:	n/a
20	chr9:117608-117658	HCPEpiC	choroid plexus:	n/a
21	chr9:273072-273122	HCT-116	colon:	n/a
22	chr9:176893-176943	NH-A	brain:	n/a
23	chr9:73835-73885	HCT-116	colon:	n/a
24	chr9:273072-273122	K562	blood:	n/a
25	chr9:118530-118580	SKMC	muscle:	n/a
26	chr9:73568-73618	HRE	kidney:	n/a
27	chr9:211689-211739	BJ	skin:	n/a
28	chr9:114140-114190	NHBE	bronchial:	n/a
29	chr9:117044-117094	GM12878	blood:	n/a
30	chr9:117608-117658	SK-N-SH_RA	brain:	n/a
31	chr9:73835-73885	CMK	blood:	n/a
32	chr9:73835-73885	HMEC	breast:	n/a
33	chr9:114838-114888	GM12891	blood:	n/a
34	chr9:112937-112987	SK-N-SH	brain:	n/a
35	chr9:215561-215611	K562	blood:	n/a
36	chr9:72908-72958	HMEC	breast:	n/a
37	chr9:179409-179459	BJ	skin:	n/a
38	chr9:72961-73011	HIPEpiC	eye:	n/a
39	chr9:214268-214318	SK-N-SH_RA	brain:	n/a
40	chr9:215368-215418	HIPEpiC	eye:	n/a
41	chr9:114359-114409	HRPEpiC	eye:	n/a
42	chr9:214612-214662	NHBE	bronchial:	n/a
43	chr9:118530-118580	HAEpiC	amniotic membrane:	n/a
44	chr9:73568-73618	Hela-S3	cervix:	n/a
45	chr9:73704-73754	NT2-D1	testis:	n/a
46	chr9:176893-176943	GM06990	blood:	n/a
47	chr9:117608-117658	AG04449	skin:	fetal
48	chr9:273072-273122	HEK293	kidney:	embryo
49	chr9:118530-118580	Jurkat	blood:	n/a
50	chr9:213650-213700	AG04449	skin:	fetal

(count:136 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr9:255761..258409-chr9:263285..266102,2	K562	blood:
2	chr9:207715..211592-chr9:270281..275557,5	K562	blood:
3	chr9:316274..318543-chr9:331270..334145,2	MCF-7	breast:
4	chr9:331276..333871-chr9:335644..338943,3	MCF-7	breast:
5	chr9:283346..286966-chr9:287946..290894,7	K562	blood:
6	chr9:237104..239333-chr9:240417..242425,2	K562	blood:
7	chr9:268889..271022-chr9:277493..279614,2	K562	blood:
8	chr9:258428..261727-chr9:265742..268870,3	K562	blood:
9	chr9:253544..257279-chr9:268731..273892,6	K562	blood:
10	chr9:224153..226474-chr9:270248..273178,2	K562	blood:
11	chr9:246962..249799-chr9:250077..252857,2	K562	blood:
12	chr9:288365..290115-chr9:299185..301598,2	MCF-7	breast:
13	chr9:214091..217459-chr9:295851..299102,3	MCF-7	breast:
14	chr9:207956..209819-chr9:211466..213662,2	MCF-7	breast:
15	chr9:213868..216890-chr9:248711..251891,4	K562	blood:
16	chr9:214778..216543-chr9:219574..221163,2	MCF-7	breast:
17	chr9:258428..261727-chr9:265742..268870,3	K562	blood:
18	chr9:286841..289218-chr9:291668..294143,2	K562	blood:
19	chr9:237820..240828-chr9:247584..251042,3	K562	blood:
20	chr9:213656..215329-chr9:262330..263868,2	K562	blood:
21	chr9:265556..268525-chr9:268878..270498,2	K562	blood:
22	chr9:347478..348338-chr9:806313..807172,2	MCF-7	breast:
23	chr9:207956..209819-chr9:211466..213662,2	MCF-7	breast:
24	chr9:252242..255061-chr9:271559..273805,3	K562	blood:
25	chr9:347951..349550-chr9:363997..366575,2	MCF-7	breast:
26	chr9:255761..258409-chr9:263285..266102,2	K562	blood:
27	chr9:271874..274602-chr9:275665..279412,3	K562	blood:
28	chr9:212545..218648-chr9:270340..281940,20	K562	blood:
29	chr9:213589..216422-chr9:270983..274599,7	K562	blood:
30	chr9:347287..349476-chr9:362112..363970,2	MCF-7	breast:
31	chr9:265556..268525-chr9:268878..270498,2	K562	blood:
32	chr9:212545..218648-chr9:270340..281940,20	K562	blood:
33	chr9:318530..320927-chr9:322721..325349,2	K562	blood:
34	chr9:211790..213319-chr9:241598..244495,2	K562	blood:
35	chr9:213587..215367-chr9:247326..250011,2	MCF-7	breast:
36	chr9:331276..333871-chr9:335644..338943,3	MCF-7	breast:
37	chr9:250806..252981-chr9:269858..272236,2	MCF-7	breast:
38	chr9:209849..211411-chr9:213516..215617,2	MCF-7	breast:
39	chr20:61557637..61559255-chr9:214332..216174,2	MCF-7	breast:
40	chr9:268983..271562-chr9:284279..286719,2	MCF-7	breast:
41	chr9:240408..242135-chr9:247395..249007,2	MCF-7	breast:
42	chr9:237820..240828-chr9:247584..251042,3	K562	blood:
43	chr9:224695..226653-chr9:227779..229816,2	K562	blood:
44	chr9:237104..239333-chr9:240417..242425,2	K562	blood:
45	chr9:286841..289218-chr9:291668..294143,2	K562	blood:
46	chr9:239328..240900-chr9:247584..249872,2	K562	blood:
47	chr9:223853..225771-chr9:261619..263535,2	K562	blood:
48	chr9:213603..216956-chr9:218226..220394,3	K562	blood:
49	chr9:276287..280123-chr9:282139..284880,4	K562	blood:
50	chr9:257830..262248-chr9:271354..273884,5	K562	blood:

(count:46 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FOXD4-1	chr9:113694-113754	ENSG00000231808
2	lnc-FOXD4-3	chr9:114040-115772	NONHSAT129899
3	lnc-FOXD4-2	chr9:102473-102541	ENSG00000227917
4	lnc-DOCK8-6	chr9:64882-65292	ucscGeneNc_uc003zfx_2
5	lnc-DOCK8-3	chr9:74149-74205	ENSG00000225655.1
6	lnc-FOXD4-2	chr9:109316-109471	NONHSAT129895
7	lnc-FOXD4-2	chr9:101002-101304	ENSG00000227917
8	lnc-FOXD4-2	chr9:102740-102941	ENSG00000227917
9	lnc-DOCK8-6	chr9:64882-65298	NONHSAT129888
10	lnc-DOCK8-6	chr9:64882-65298	NONHSAT129887
11	lnc-FOXD4-4	chr9:90995-91304	ucscGeneNc_uc003zfy_2
12	lnc-FOXD4-4	chr9:92740-92850	NONHSAT129892
13	lnc-FOXD4-4	chr9:90804-91304	NONHSAT129892
14	lnc-DOCK8-6	chr9:64149-64205	NONHSAT129888
15	lnc-DOCK8-6	chr9:62698-62816	ucscGeneNc_uc003zfx_2
16	lnc-FOXD4-1	chr9:112716-113067	ENSG00000231808
17	lnc-FOXD4-2	chr9:109596-109842	NONHSAT129897
18	lnc-FOXD4-3	chr9:113606-113656	NONHSAT129899
19	lnc-FOXD4-4	chr9:92473-92541	ucscGeneNc_uc003zfy_2
20	lnc-FOXD4-5	chr9:151745-152078	NONHSAT129910
21	lnc-FOXD4-4	chr9:91002-91304	NONHSAT129893
22	lnc-FOXD4-5	chr9:154709-154795	NONHSAT129910
23	lnc-DOCK8-3	chr9:72706-72816	ENSG00000225655.1
24	lnc-DOCK8-3	chr9:79345-79537	ENSG00000225655.1
25	lnc-FOXD4-4	chr9:92740-92941	NONHSAT129893
26	lnc-C9orf66-1	chr9:272905-273002	ENSG00000235880.1
27	lnc-FOXD4-2	chr9:108804-109469	NONHSAT129897
28	lnc-FOXD4-2	chr9:101014-101304	NONHSAT129895
29	lnc-DOCK8-3	chr9:74882-75298	ENSG00000225655.1
30	lnc-FOXD4-5	chr9:156481-156527	NONHSAT129910
31	lnc-C9orf66-1	chr9:267966-268273	ENSG00000235880.1
32	lnc-DOCK8-6	chr9:62706-62816	NONHSAT129887
33	lnc-FOXD4-2	chr9:102716-103067	NONHSAT129896
34	lnc-DOCK8-6	chr9:62716-62816	NONHSAT129888
35	lnc-DOCK8-6	chr9:69345-69537	NONHSAT129886
36	lnc-DOCK8-6	chr9:78742-78826	NONHSAT129886
37	lnc-DOCK8-3	chr9:88742-88826	ENSG00000225655.1
38	lnc-DOCK8-3	chr9:72716-72816	ENSG00000225655.1
39	lnc-FOXD4-4	chr9:92740-92941	ucscGeneNc_uc003zfy_2
40	lnc-DOCK8-6	chr9:62701-62816	NONHSAT129886
41	lnc-FOXD4-2	chr9:102740-102850	NONHSAT129895
42	lnc-DOCK8-3	chr9:74882-75298	ENSG00000225655.1
43	lnc-FOXD4-4	chr9:92473-92541	NONHSAT129893
44	lnc-FOXD4-5	chr9:161567-161647	NONHSAT129910
45	lnc-FOXD4-2	chr9:103694-103754	NONHSAT129896
46	lnc-DOCK8-3	chr9:72701-72816	ENSG00000225655.1

No data

Variant related genes	Relation type
DOCK8	TF binding region
ENSG00000231808	TF binding region
ENSG00000225655	TF binding region
FOXD4	TF binding region
ENSG00000235880	TF binding region
ENSG00000144140	TF binding region
ENSG00000227917	TF binding region
CBWD1	TF binding region
C9orf66	TF binding region
DOCK8	CpG island
ENSG00000231808	CpG island
ENSG00000225655	CpG island
FOXD4	CpG island
ENSG00000235880	CpG island
ENSG00000144140	CpG island
ENSG00000227917	CpG island
CBWD1	CpG island
C9orf66	CpG island
ENSG00000183784	chromatin interactions
ENSG00000235880	chromatin interactions
ENSG00000227155	chromatin interactions
ENSG00000101191	chromatin interactions
ENSG00000107099	chromatin interactions

Extended variants
information (count: 12898 )
Associated
traits (count: 123 )

Variant overlapped rSNPs/rCNVs (count:12898 , 50 per page) page: 1 2 3 4 5 6 7 ... 258

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10814410	chr9:46587-46588	Enhancers	n/a	n/a	Overlapped CNVs	mRNA abundance
2	rs190386314	chr9:46603-46604	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs10814420	chr9:46614-46615	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs532032468	chr9:46620-46621	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs540647790	chr9:46639-46640	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs559052726	chr9:46645-46646	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs529678091	chr9:46659-46660	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs372033565	chr9:46683-46684	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs549440830	chr9:46755-46756	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs376857719	chr9:46778-46779	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs567948224	chr9:46876-46877	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs4741779	chr9:46879-46880	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs4740702	chr9:46904-46905	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs9407056	chr9:46923-46924	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs67926462	chr9:46928-46929	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs531985093	chr9:46942-46943	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs2998937	chr9:46949-46950	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs4741785	chr9:46962-46963	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs550360624	chr9:46971-46972	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs571775573	chr9:46980-46981	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs4741786	chr9:46992-46993	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs539099142	chr9:47000-47001	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs554221268	chr9:47006-47007	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs565966736	chr9:47020-47021	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs536645789	chr9:47033-47034	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs554606825	chr9:47046-47047	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs575891414	chr9:47060-47061	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs536850496	chr9:47065-47066	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs10973214	chr9:47097-47098	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs555547332	chr9:47102-47103	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs2998936	chr9:47123-47124	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs576545136	chr9:47124-47125	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs140056235	chr9:47148-47149	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs559379243	chr9:47180-47181	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs4741796	chr9:47217-47218	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs9407063	chr9:47242-47243	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs541802458	chr9:47244-47245	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs561435587	chr9:47276-47277	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs9407064	chr9:47303-47304	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs181248323	chr9:47318-47319	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs9408289	chr9:47352-47353	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs532729087	chr9:47366-47367	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs547620686	chr9:47373-47374	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs200738096	chr9:47395-47396	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs566154274	chr9:47458-47459	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs148668613	chr9:47459-47460	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs370646707	chr9:47488-47489	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs375114732	chr9:47535-47536	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs536913695	chr9:47557-47558	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs558414355	chr9:47576-47577	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:123)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	20164920	CNVD
Ovarian cancer	21720365	CNVD
Myelofibrosis	22110671	CNVD
Lynch syndrome	18415027	CNVD
Retinoblastoma	21504564	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioblastoma multiforme	22286061	CNVD
Williams-beuren syndrome	18553513	CNVD
Disorders of sex development	21048976	CNVD
Pilocytic astrocytoma	18622384	CNVD
Pilomyxoid astrocytoma	18622384	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
prenatal diagnosis	20453657	CNVD
Gastric cancer	16715143	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Autism	22495311	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
early-passage human iPS cells	21368824	CNVD
Schizophrenia	20967226	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Schizophrenia	23813976	CNVD
Lung cancer	18438408	CNVD
Autism	20531469	CNVD
Breast cancer	22522925	CNVD
Intracranial ependymoma	16609018	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Developmental delay	20808231	CNVD
Obesity	20808231	CNVD
Myelodysplastic syndrome	21251322	CNVD
Primary immunodeficiency	22942019	CNVD
Melanoma	20877625	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Cancer	21215367	CNVD
Renal cell carcinoma	21215367	CNVD
Williams Syndrome	20824207	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD
Breast cancer	21364760	CNVD
Bipolar disorder	19114987	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD

Chromatin state (count:3400 , 50 per page) page: 1 2 3 4 5 6 7 ... 68

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:46200-47600	Enhancers	K562	blood
2	chr9:46400-46600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr9:48400-52400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr9:52400-53400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr9:52600-53000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
6	chr9:62000-62200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr9:62200-63000	Enhancers	Fetal Thymus	thymus
8	chr9:62800-63000	Enhancers	Dnd41	blood
9	chr9:63000-63200	Enhancers	Primary T helper cells PMA-I stimulated	--
10	chr9:63000-63200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
11	chr9:63000-63200	Flanking Active TSS	Fetal Thymus	thymus
12	chr9:63000-63200	Flanking Active TSS	Dnd41	blood
13	chr9:63000-63400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr9:63000-63400	Enhancers	Primary monocytes fromperipheralblood	blood
15	chr9:63000-63400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
16	chr9:63000-63600	Enhancers	Primary T cells fromperipheralblood	blood
17	chr9:63000-63600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
18	chr9:63000-63600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr9:63000-63600	Enhancers	Fetal Lung	lung
20	chr9:63000-64000	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr9:63000-64200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
22	chr9:63200-63400	Enhancers	Primary hematopoietic stem cells short term culture	blood
23	chr9:63200-63400	Active TSS	Fetal Thymus	thymus
24	chr9:63200-64000	Active TSS	Dnd41	blood
25	chr9:63600-65800	Weak transcription	Fetal Lung	lung
26	chr9:64000-64200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
27	chr9:64000-64200	Flanking Active TSS	Dnd41	blood
28	chr9:64200-64800	Enhancers	Dnd41	blood
29	chr9:65800-66000	Enhancers	Fetal Lung	lung
30	chr9:72200-74000	Active TSS	NHLF	lung
31	chr9:72600-73000	Bivalent/Poised TSS	Fetal Muscle Trunk	muscle
32	chr9:72800-73000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
33	chr9:72800-73000	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
34	chr9:72800-73000	Enhancers	Primary hematopoietic stem cells	blood
35	chr9:72800-73000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
36	chr9:72800-73000	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr9:72800-73000	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr9:72800-73000	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
39	chr9:72800-73000	Bivalent Enhancer	Fetal Thymus	thymus
40	chr9:72800-73000	Enhancers	Gastric	stomach
41	chr9:72800-73000	Bivalent Enhancer	Placenta Amnion	Placenta Amnion
42	chr9:72800-73000	Active TSS	Stomach Smooth Muscle	stomach
43	chr9:72800-73000	Enhancers	Spleen	Spleen
44	chr9:72800-73000	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
45	chr9:72800-73200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
46	chr9:72800-73200	Bivalent Enhancer	Primary T cells effector/memory enriched fromperipheralblood	blood
47	chr9:72800-73600	Active TSS	Primary T regulatory cells fromperipheralblood	blood
48	chr9:72800-73600	Active TSS	Adipose Nuclei	Adipose
49	chr9:72800-73600	Active TSS	Skeletal Muscle Female	skeletal muscle
50	chr9:72800-73800	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links