Variant report

Variant	nsv1031809
Chromosome Location	chr9:327139-715668
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4385)
CpG islands
(count:1100)
Chromatin interactive
region (count:136)
LncRNA
region (count:81)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:4385 , 50 per page) page: 1 2 3 4 5 6 7 ... 88

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:672953-673149	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:495829-496174	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:706757-707182	HepG2	liver:	n/a	chr9:706927-706943
4	ARID3A	chr9:706038-706477	HepG2	liver:	n/a	n/a
5	ARID3A	chr9:336046-336405	HepG2	liver:	n/a	n/a
6	ARID3A	chr9:504390-504746	K562	blood:	n/a	n/a
7	ARID3A	chr9:710020-710338	HepG2	liver:	n/a	n/a
8	ARID3A	chr9:685087-685396	HepG2	liver:	n/a	n/a
9	ARID3A	chr9:371491-371553	K562	blood:	n/a	n/a
10	ARID3A	chr9:463883-464115	HepG2	liver:	n/a	n/a
11	ARID3A	chr9:676651-678350	HepG2	liver:	n/a	n/a
12	ARID3A	chr9:682346-683925	HepG2	liver:	n/a	n/a
13	ARID3A	chr9:696723-696891	HepG2	liver:	n/a	n/a
14	ARID3A	chr9:592251-592433	HepG2	liver:	n/a	n/a
15	ARID3A	chr9:613790-614724	HepG2	liver:	n/a	n/a
16	ARID3A	chr9:489187-489524	HepG2	liver:	n/a	n/a
17	ARID3A	chr9:673768-674544	HepG2	liver:	n/a	n/a
18	ATF1	chr9:428430-428702	K562	blood:	n/a	n/a
19	ATF1	chr9:491995-492195	K562	blood:	n/a	n/a
20	ATF3	chr9:557723-558324	A549	lung:	n/a	n/a
21	BACH1	chr9:503882-504954	H1-hESC	embryonic stem cell:	n/a	n/a
22	BACH1	chr9:450112-450344	H1-hESC	embryonic stem cell:	n/a	n/a
23	BACH1	chr9:561382-561724	H1-hESC	embryonic stem cell:	n/a	n/a
24	BACH1	chr9:505331-505595	H1-hESC	embryonic stem cell:	n/a	n/a
25	BACH1	chr9:652937-653241	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr9:706737-707111	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr9:503516-503574	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr9:674115-674612	H1-hESC	embryonic stem cell:	n/a	n/a
29	BACH1	chr9:470546-470746	H1-hESC	embryonic stem cell:	n/a	n/a
30	BACH1	chr9:557912-558114	H1-hESC	embryonic stem cell:	n/a	n/a
31	BCL11A	chr9:674131-674488	H1-hESC	embryonic stem cell:	n/a	n/a
32	BCL11A	chr9:674204-674357	H1-hESC	embryonic stem cell:	n/a	n/a
33	BCL11A	chr9:331212-331567	H1-hESC	embryonic stem cell:	n/a	n/a
34	BCL3	chr9:561269-561869	A549	lung:	n/a	n/a
35	BCL3	chr9:694616-695281	A549	lung:	n/a	n/a
36	BCL3	chr9:469817-470210	A549	lung:	n/a	chr9:470121-470130
37	BCL3	chr9:470157-470838	A549	lung:	n/a	n/a
38	BCL3	chr9:463755-464226	A549	lung:	n/a	n/a
39	BCL3	chr9:503842-504488	A549	lung:	n/a	chr9:504175-504184 chr9:504327-504340 chr9:504456-504469
40	BCL3	chr9:561341-561682	GM12878	blood:	n/a	n/a
41	BCL3	chr9:489067-489648	A549	lung:	n/a	n/a
42	BCL3	chr9:557812-558394	A549	lung:	n/a	n/a
43	BCLAF1	chr9:469741-470596	GM12878	blood:	n/a	chr9:470121-470130
44	BHLHE40	chr9:682578-683474	HepG2	liver:	n/a	n/a
45	BHLHE40	chr9:567560-567673	GM12878	blood:	n/a	n/a
46	BHLHE40	chr9:629150-629515	GM12878	blood:	n/a	n/a
47	BHLHE40	chr9:470231-470621	K562	blood:	n/a	n/a
48	BHLHE40	chr9:469953-470590	GM12878	blood:	n/a	chr9:470115-470131
49	BHLHE40	chr9:682623-683064	HepG2	liver:	n/a	n/a
50	BHLHE40	chr9:546835-547287	K562	blood:	n/a	n/a

(count:1100 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:470323-470373	ProgFib	skin:	n/a
2	chr9:426894-426944	SK-N-SH	brain:	n/a
3	chr9:470323-470373	ProgFib	skin:	n/a
4	chr9:426894-426944	SK-N-SH	brain:	n/a
5	chr9:472966-473016	HPAEpiC	pulmonary alveolar:	n/a
6	chr9:505571-505621	SK-N-MC	brain:	n/a
7	chr9:505571-505621	BJ	skin:	n/a
8	chr9:507411-507461	HRE	kidney:	n/a
9	chr9:505721-505771	HRE	kidney:	n/a
10	chr9:505571-505621	NT2-D1	testis:	n/a
11	chr9:472966-473016	MCF10A-Er-Src	breast:	n/a
12	chr9:504774-504824	Jurkat	blood:	n/a
13	chr9:471920-471970	ProgFib	skin:	n/a
14	chr9:707387-707437	HEK293	kidney:	embryo
15	chr9:707166-707216	HRCEpiC	kidney:	n/a
16	chr9:714269-714319	Jurkat	blood:	n/a
17	chr9:507411-507461	ovcar-3	ovarian:	n/a
18	chr9:472966-473016	K562	blood:	n/a
19	chr9:469777-469827	GM12892	blood:	n/a
20	chr9:707387-707437	SK-N-SH_RA	brain:	n/a
21	chr9:707410-707460	A549	lung:	n/a
22	chr9:707387-707437	HCM	heart:	n/a
23	chr9:504774-504824	HRPEpiC	eye:	n/a
24	chr9:426894-426944	HRPEpiC	eye:	n/a
25	chr9:471920-471970	AG04450	lung:	fetal
26	chr9:470323-470373	H1-hESC	embryonic stem cell:	embryo
27	chr9:472966-473016	ECC-1	luminal epithelium:	n/a
28	chr9:707166-707216	BE2_C	brain:	n/a
29	chr9:707387-707437	BJ	skin:	n/a
30	chr9:505235-505285	HMEC	breast:	n/a
31	chr9:505721-505771	RPTEC	kidney:	n/a
32	chr9:505721-505771	GM12892	blood:	n/a
33	chr9:707166-707216	SK-N-MC	brain:	n/a
34	chr9:505571-505621	GM12878	blood:	n/a
35	chr9:705143-705193	AG09319	gingival:	n/a
36	chr9:503937-503987	H1-hESC	embryonic stem cell:	embryo
37	chr9:714269-714319	HCF	heart:	n/a
38	chr9:505235-505285	BJ	skin:	n/a
39	chr9:505571-505621	AoSMC	blood vessel:	n/a
40	chr9:504774-504824	AG09309	skin:	n/a
41	chr9:503937-503987	AG09309	skin:	n/a
42	chr9:505571-505621	HMEC	breast:	n/a
43	chr9:705143-705193	RPTEC	kidney:	n/a
44	chr9:472966-473016	CMK	blood:	n/a
45	chr9:472966-473016	Caco-2	colon:	n/a
46	chr9:707410-707460	NT2-D1	testis:	n/a
47	chr9:471920-471970	NHBE	bronchial:	n/a
48	chr9:707410-707460	HAEpiC	amniotic membrane:	n/a
49	chr9:505235-505285	HUVEC	blood vessel:	n/a
50	chr9:503937-503987	HEK293	kidney:	embryo

(count:136 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr9:582031..585321-chr9:586707..590039,3	K562	blood:
2	chr9:347287..349476-chr9:362112..363970,2	MCF-7	breast:
3	chr9:613569..614095-chr9:1100690..1101615,2	MCF-7	breast:
4	chr9:468995..471572-chr9:503851..506185,2	MCF-7	breast:
5	chr9:331276..333871-chr9:335644..338943,3	MCF-7	breast:
6	chr9:490052..492255-chr9:502875..504712,2	MCF-7	breast:
7	chr9:518740..521510-chr9:531283..533605,2	MCF-7	breast:
8	chr9:418287..419917-chr9:426635..429458,2	MCF-7	breast:
9	chr9:693477..696151-chr9:698863..701082,2	MCF-7	breast:
10	chr9:452598..454624-chr9:456757..459664,2	MCF-7	breast:
11	chr9:582031..585321-chr9:586707..590039,3	K562	blood:
12	chr9:459270..461586-chr9:468346..470515,2	MCF-7	breast:
13	chr9:680230..683179-chr9:683361..685450,2	MCF-7	breast:
14	chr9:350965..353575-chr9:397923..399924,2	K562	blood:
15	chr9:441366..444017-chr9:451304..454209,2	MCF-7	breast:
16	chr9:385494..386481-chr9:546680..547596,3	MCF-7	breast:
17	chr9:457391..459101-chr9:460366..462265,2	MCF-7	breast:
18	chr1:27191066..27191830-chr9:408050..409042,2	NB4	blood:
19	chr9:470985..473419-chr9:489407..491415,2	MCF-7	breast:
20	chr9:385756..386457-chr9:1008777..1009377,2	MCF-7	breast:
21	chr9:469326..471004-chr9:547085..549851,2	MCF-7	breast:
22	chr9:396391..399763-chr9:403196..405645,3	K562	blood:
23	chr9:414319..416465-chr9:419585..421155,2	MCF-7	breast:
24	chr10:14227179..14227880-chr9:613613..614133,4	MCF-7	breast:
25	chr9:512039..514160-chr9:515791..519174,3	K562	blood:
26	chr9:686763..689090-chr9:692801..694616,2	MCF-7	breast:
27	chr9:634722..638024-chr9:640128..643682,5	MCF-7	breast:
28	chr9:385566..386417-chr9:764222..764740,2	MCF-7	breast:
29	chr9:581821..582545-chr9:807512..808214,2	MCF-7	breast:
30	chr9:555602..557901-chr9:561314..563396,2	K562	blood:
31	chr9:441366..444017-chr9:451304..454209,2	MCF-7	breast:
32	chr9:613714..614307-chr9:893592..894180,2	MCF-7	breast:
33	chr9:581860..582832-chr9:613640..614518,3	MCF-7	breast:
34	chr9:387700..389795-chr9:395557..397565,2	MCF-7	breast:
35	chr9:396391..399763-chr9:403196..405645,3	K562	blood:
36	chr9:347478..348338-chr9:806313..807172,2	MCF-7	breast:
37	chr9:555602..557901-chr9:561314..563396,2	K562	blood:
38	chr9:680230..683179-chr9:683361..685450,2	MCF-7	breast:
39	chr9:640721..642302-chr9:644961..647354,2	K562	blood:
40	chr9:444957..447415-chrX:145121393..145123151,2	MCF-7	breast:
41	chr9:500269..502662-chr9:502681..505040,2	MCF-7	breast:
42	chr9:418287..419917-chr9:426635..429458,2	MCF-7	breast:
43	chr9:469326..471004-chr9:547085..549851,2	MCF-7	breast:
44	chr9:468933..471416-chr9:484729..487754,3	MCF-7	breast:
45	chr9:495605..498122-chr9:502386..505122,3	MCF-7	breast:
46	chr9:581860..582832-chr9:613640..614518,3	MCF-7	breast:
47	chr9:613348..614490-chr9:763793..765061,13	MCF-7	breast:
48	chr9:698899..701683-chr9:703340..705392,2	MCF-7	breast:
49	chr9:469974..471479-chr9:511045..512830,2	K562	blood:
50	chr9:487771..490019-chr9:514331..516293,2	MCF-7	breast:

(count:81 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-DOCK8-5	chr9:470592-470677	NONHSAT129926
2	lnc-C9orf66-2	chr9:456201-456703	ENSG00000227155.3
3	lnc-C9orf66-2	chr9:456201-456703	ENSG00000227155.3
4	lnc-C9orf66-2	chr9:470765-470934	ENSG00000227155.3
5	lnc-C9orf66-3	chr9:674124-674379	ENSG00000227914.3
6	lnc-C9orf66-2	chr9:465962-466065	ENSG00000227155.3
7	lnc-C9orf66-2	chr9:454447-454606	ENSG00000227155.3
8	lnc-C9orf66-2	chr9:456211-456703	ENSG00000227155.3
9	lnc-C9orf66-2	chr9:456201-456703	ENSG00000227155.3
10	lnc-C9orf66-2	chr9:470765-470816	ENSG00000227155.3
11	lnc-C9orf66-2	chr9:457004-457047	ENSG00000227155.3
12	lnc-C9orf66-8	chr9:507258-507553	NONHSAT129930
13	lnc-DOCK8-5	chr9:473194-473273	NONHSAT129926
14	lnc-C9orf66-2	chr9:465962-466069	ENSG00000227155.3
15	lnc-C9orf66-2	chr9:469722-469802	ENSG00000227155.3
16	lnc-C9orf66-2	chr9:458370-458423	ENSG00000227155.3
17	lnc-C9orf66-2	chr9:469722-469836	ENSG00000227155.3
18	lnc-C9orf66-3	chr9:680857-681046	ENSG00000227914.3
19	lnc-C9orf66-2	chr9:456915-457047	ENSG00000227155.3
20	lnc-C9orf66-3	chr9:677542-677628	ENSG00000227914.3
21	lnc-C9orf66-3	chr9:685528-685555	ENSG00000227914.3
22	lnc-DOCK8-1	chr9:495238-495610	ENSG00000228115.1
23	lnc-DOCK8-5	chr9:484282-484491	NONHSAT129926
24	lnc-C9orf66-2	chr9:466900-467336	ENSG00000227155.3
25	lnc-C9orf66-2	chr9:466688-466866	ENSG00000227155.3
26	lnc-C9orf66-2	chr9:454304-454606	ENSG00000227155.3
27	lnc-DOCK8-5	chr9:471449-471586	NONHSAT129926
28	lnc-C9orf66-2	chr9:456530-456703	ENSG00000227155.3
29	lnc-C9orf66-2	chr9:456201-456703	ENSG00000227155.3
30	lnc-C9orf66-2	chr9:456201-456988	ENSG00000227155.3
31	lnc-C9orf66-2	chr9:456201-456358	ENSG00000227155.1
32	lnc-C9orf66-3	chr9:673817-674379	ENSG00000227914.1
33	lnc-DOCK8-2	chr9:547038-547341	NONHSAT129931
34	lnc-C9orf66-2	chr9:465962-466069	ENSG00000227155.3
35	lnc-C9orf66-2	chr9:492084-492112	ENSG00000227155.3
36	lnc-C9orf66-2	chr9:465962-466069	ENSG00000227155.3
37	lnc-C9orf66-3	chr9:685528-685555	ENSG00000227914.1
38	lnc-C9orf66-2	chr9:465962-466069	ENSG00000227155.3
39	lnc-DOCK8-5	chr9:476628-476769	NONHSAT129927
40	lnc-C9orf66-2	chr9:456545-456703	ENSG00000227155.3
41	lnc-C9orf66-2	chr9:456521-456703	ENSG00000227155.3
42	lnc-DOCK8-2	chr9:549190-549531	ENSG00000226403.1
43	lnc-C9orf66-2	chr9:456201-456703	ENSG00000227155.3
44	lnc-C9orf66-2	chr9:456915-457047	ENSG00000227155.3
45	lnc-DMRT1-3	chr9:659986-660326	NONHSAT129934
46	lnc-DOCK8-2	chr9:549107-549531	ENSG00000226403.1
47	lnc-C9orf66-3	chr9:680857-681046	ENSG00000227914.1
48	lnc-C9orf66-2	chr9:454585-454606	ENSG00000227155.3
49	lnc-C9orf66-2	chr9:469722-469802	ENSG00000227155.3
50	lnc-C9orf66-2	chr9:454304-454606	ENSG00000227155.1

No data

Variant related genes	Relation type
ENSG00000226403	TF binding region
DOCK8	TF binding region
RNU6-1327P	TF binding region
RN7SL412P	TF binding region
ENSG00000228115	TF binding region
ENSG00000227914	TF binding region
ENSG00000227155	TF binding region
KANK1	TF binding region
ENSG00000235330	TF binding region
ENSG00000229875	TF binding region
ENSG00000226403	CpG island
DOCK8	CpG island
RNU6-1327P	CpG island
RN7SL412P	CpG island
ENSG00000228115	CpG island
ENSG00000227914	CpG island
ENSG00000227155	CpG island
KANK1	CpG island
ENSG00000235330	CpG island
ENSG00000229875	CpG island
ENSG00000226403	chromatin interactions
ENSG00000099810	chromatin interactions
ENSG00000168209	chromatin interactions
ENSG00000074603	chromatin interactions
ENSG00000065978	chromatin interactions
ENSG00000169641	chromatin interactions
ENSG00000227914	chromatin interactions
ENSG00000107099	chromatin interactions
ENSG00000264545	chromatin interactions
ENSG00000227155	chromatin interactions
ENSG00000107104	chromatin interactions
ENSG00000235330	chromatin interactions
ENSG00000228115	chromatin interactions

Extended variants
information (count: 22132 )
Associated
traits (count: 122 )

Variant overlapped rSNPs/rCNVs (count:22132 , 50 per page) page: 1 2 3 4 5 6 7 ... 443

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs577444740	chr9:327152-327153	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs545011528	chr9:327172-327173	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs559054798	chr9:327183-327184	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs528111520	chr9:327188-327189	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs112348512	chr9:327192-327193	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs138088476	chr9:327194-327195	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs368543143	chr9:327270-327271	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs143658088	chr9:327292-327293	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs530857594	chr9:327312-327313	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs10491693	chr9:327365-327366	Weak transcription Enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs533247438	chr9:327368-327369	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs548852247	chr9:327393-327394	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs546887639	chr9:327448-327449	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs566722606	chr9:327453-327454	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs535843721	chr9:327513-327514	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs555535587	chr9:327528-327529	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs10758079	chr9:327535-327536	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs141150588	chr9:327542-327543	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs557918828	chr9:327553-327554	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs78929801	chr9:327572-327573	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs75260372	chr9:327580-327581	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs554452101	chr9:327585-327586	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs139106869	chr9:327589-327590	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs10813641	chr9:327603-327604	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs146462235	chr9:327605-327606	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs575388076	chr9:327642-327643	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs544357501	chr9:327696-327697	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs67042213	chr9:327700-327701	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs192762822	chr9:327735-327736	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs75614816	chr9:327779-327780	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs560403959	chr9:327780-327781	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs3818558	chr9:327782-327783	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs549339781	chr9:327783-327784	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs552643279	chr9:327828-327829	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs537915963	chr9:327846-327847	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs140119974	chr9:327847-327848	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs112164121	chr9:327881-327882	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs534415518	chr9:327899-327900	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs2296825	chr9:327938-327939	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
40	rs542215471	chr9:327953-327954	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs2296826	chr9:327957-327958	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs78125751	chr9:327962-327963	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs200634862	chr9:327983-327984	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs544294830	chr9:327984-327985	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs2296827	chr9:327996-327997	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs577869937	chr9:328003-328004	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs2296828	chr9:328006-328007	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs548025514	chr9:328007-328008	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs145978391	chr9:328025-328026	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs560133135	chr9:328046-328047	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:122)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	20164920	CNVD
Ovarian cancer	21720365	CNVD
Myelofibrosis	22110671	CNVD
Lynch syndrome	18415027	CNVD
Retinoblastoma	21504564	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioblastoma multiforme	22286061	CNVD
Williams-beuren syndrome	18553513	CNVD
Disorders of sex development	21048976	CNVD
Pilocytic astrocytoma	18622384	CNVD
Pilomyxoid astrocytoma	18622384	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
prenatal diagnosis	20453657	CNVD
Gastric cancer	16715143	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Schizophrenia	20967226	CNVD
Lung cancer	18438408	CNVD
Autism	20531469	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Developmental delay	20808231	CNVD
Obesity	20808231	CNVD
Myelodysplastic syndrome	21251322	CNVD
Primary immunodeficiency	22942019	CNVD
Melanoma	20877625	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD
Breast cancer	22522925	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Breast cancer	21364760	CNVD
Bipolar disorder	19114987	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
early-passage human iPS cells	21368824	CNVD
Renal cell carcinoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Ependymoma	20639864	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Schizophrenia	23813976	CNVD
Non-small cell lung cancer	16651412	CNVD
Cancer	21272361	CNVD

Chromatin state (count:8990 , 50 per page) page: 1 2 3 4 5 6 7 ... 180

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:268800-337200	Weak transcription	Gastric	stomach
2	chr9:302600-350200	Weak transcription	Small Intestine	intestine
3	chr9:304400-334200	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr9:305200-378000	Weak transcription	Rectal Smooth Muscle	rectum
5	chr9:310600-336200	Weak transcription	Colonic Mucosa	Colon
6	chr9:312200-330800	Weak transcription	Pancreas	Pancrea
7	chr9:312800-336600	Weak transcription	Duodenum Smooth Muscle	Duodenum
8	chr9:313200-336000	Weak transcription	Liver	Liver
9	chr9:315200-335400	Weak transcription	Duodenum Mucosa	Duodenum
10	chr9:317800-352200	Weak transcription	K562	blood
11	chr9:318800-327600	Weak transcription	Adipose Nuclei	Adipose
12	chr9:318800-328000	Weak transcription	Rectal Mucosa Donor 29	rectum
13	chr9:319000-328000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
14	chr9:319000-328000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
15	chr9:319000-328000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
16	chr9:319400-330600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr9:320200-327800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
18	chr9:320400-328000	Weak transcription	Lung	lung
19	chr9:320400-328200	Weak transcription	Placenta	Placenta
20	chr9:320400-344000	Weak transcription	Fetal Muscle Leg	muscle
21	chr9:322400-328000	Strong transcription	Primary neutrophils fromperipheralblood	blood
22	chr9:322400-334400	Strong transcription	Primary T cells fromperipheralblood	blood
23	chr9:322400-334800	Strong transcription	Primary T helper cells fromperipheralblood	blood
24	chr9:322400-335000	Strong transcription	Primary T helper cells PMA-I stimulated	--
25	chr9:322400-348800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
26	chr9:322400-349400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
27	chr9:322400-349600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
28	chr9:322400-350000	Strong transcription	Primary B cells from peripheral blood	blood
29	chr9:322400-353600	Strong transcription	Fetal Thymus	thymus
30	chr9:322400-355600	Strong transcription	Thymus	Thymus
31	chr9:322400-412200	Strong transcription	Primary T cells from cord blood	blood
32	chr9:322400-447000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
33	chr9:322400-467200	Strong transcription	Primary monocytes fromperipheralblood	blood
34	chr9:322400-467200	Strong transcription	Monocytes-CD14+_RO01746	blood
35	chr9:322600-349400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
36	chr9:323000-328000	Weak transcription	Sigmoid Colon	Sigmoid Colon
37	chr9:323600-334800	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
38	chr9:323600-347200	Strong transcription	Primary hematopoietic stem cells	blood
39	chr9:323600-359800	Strong transcription	Dnd41	blood
40	chr9:323600-467200	Strong transcription	Primary B cells from cord blood	blood
41	chr9:324800-337200	Weak transcription	Esophagus	oesophagus
42	chr9:325000-334400	Strong transcription	Primary T killer memory cells from peripheral blood	blood
43	chr9:325200-343600	Weak transcription	Fetal Intestine Small	intestine
44	chr9:325200-357400	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
45	chr9:325600-361600	Strong transcription	GM12878-XiMat	blood
46	chr9:325800-334200	Strong transcription	Primary T helper memory cells from peripheral blood 2	blood
47	chr9:325800-334800	Strong transcription	Primary T helper naive cells from peripheral blood	blood
48	chr9:326000-348400	Weak transcription	Fetal Intestine Large	intestine
49	chr9:326200-327400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
50	chr9:326200-334400	Strong transcription	Primary T helper naive cells fromperipheralblood	blood

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