Variant report

Variant	nsv1033135
Chromosome Location	chr6:34802652-34957093
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2818)
CpG islands
(count:2323)
Chromatin interactive
region (count:191)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:2818 , 50 per page) page: 1 2 3 4 5 6 7 ... 57

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:34954566-34954923	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:34807829-34807953	K562	blood:	n/a	n/a
3	ARID3A	chr6:34856773-34857038	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:34802936-34803203	K562	blood:	n/a	n/a
5	ARID3A	chr6:34954572-34954906	K562	blood:	n/a	n/a
6	ARID3A	chr6:34867597-34867797	HepG2	liver:	n/a	n/a
7	ARID3A	chr6:34913180-34913516	HepG2	liver:	n/a	n/a
8	ARID3A	chr6:34855719-34856923	K562	blood:	n/a	n/a
9	ARID3A	chr6:34921206-34922396	HepG2	liver:	n/a	n/a
10	ARID3A	chr6:34832879-34833479	K562	blood:	n/a	n/a
11	ATF1	chr6:34856679-34857207	K562	blood:	n/a	n/a
12	ATF1	chr6:34855487-34856397	K562	blood:	n/a	chr6:34855838-34855852
13	ATF1	chr6:34921512-34921692	K562	blood:	n/a	n/a
14	ATF1	chr6:34950737-34951033	K562	blood:	n/a	n/a
15	ATF1	chr6:34874691-34874810	K562	blood:	n/a	n/a
16	ATF1	chr6:34827687-34828162	K562	blood:	n/a	n/a
17	ATF1	chr6:34803008-34803279	K562	blood:	n/a	n/a
18	ATF1	chr6:34832863-34833326	K562	blood:	n/a	n/a
19	ATF2	chr6:34855555-34856110	GM12878	blood:	n/a	chr6:34855838-34855852
20	ATF2	chr6:34856545-34857022	H1-hESC	embryonic stem cell:	n/a	n/a
21	ATF2	chr6:34855474-34856393	H1-hESC	embryonic stem cell:	n/a	chr6:34855838-34855852
22	ATF2	chr6:34880420-34880916	GM12878	blood:	n/a	n/a
23	ATF2	chr6:34856633-34857098	H1-hESC	embryonic stem cell:	n/a	n/a
24	ATF2	chr6:34855528-34856206	GM12878	blood:	n/a	chr6:34855838-34855852
25	ATF2	chr6:34855549-34856136	H1-hESC	embryonic stem cell:	n/a	chr6:34855838-34855852
26	ATF3	chr6:34855584-34856143	HepG2	liver:	n/a	chr6:34855830-34855850 chr6:34855839-34855852 chr6:34855838-34855853
27	ATF3	chr6:34869076-34869473	K562	blood:	n/a	n/a
28	ATF3	chr6:34855611-34856089	A549	lung:	n/a	chr6:34855830-34855850 chr6:34855839-34855852 chr6:34855838-34855853
29	ATF3	chr6:34855553-34856043	K562	blood:	n/a	chr6:34855830-34855850 chr6:34855839-34855852 chr6:34855838-34855853
30	ATF3	chr6:34855626-34856017	H1-hESC	embryonic stem cell:	n/a	chr6:34855830-34855850 chr6:34855839-34855852 chr6:34855838-34855853
31	ATF3	chr6:34855595-34856148	GM12878	blood:	n/a	chr6:34855830-34855850 chr6:34855839-34855852 chr6:34855838-34855853
32	ATF3	chr6:34869194-34869500	H1-hESC	embryonic stem cell:	n/a	n/a
33	ATF3	chr6:34855748-34855947	GM12878	blood:	n/a	chr6:34855830-34855850 chr6:34855839-34855852 chr6:34855838-34855853
34	ATF3	chr6:34855575-34856023	H1-hESC	embryonic stem cell:	n/a	chr6:34855830-34855850 chr6:34855839-34855852 chr6:34855838-34855853
35	ATF3	chr6:34855564-34856045	K562	blood:	n/a	chr6:34855830-34855850 chr6:34855839-34855852 chr6:34855838-34855853
36	ATF3	chr6:34937401-34937669	K562	blood:	n/a	n/a
37	ATF3	chr6:34855565-34856126	K562	blood:	n/a	chr6:34855830-34855850 chr6:34855839-34855852 chr6:34855838-34855853
38	ATF3	chr6:34856802-34857214	K562	blood:	n/a	n/a
39	ATF3	chr6:34855569-34856012	HepG2	liver:	n/a	chr6:34855830-34855850 chr6:34855839-34855852 chr6:34855838-34855853
40	BACH1	chr6:34842743-34842837	K562	blood:	n/a	n/a
41	BACH1	chr6:34937468-34937748	K562	blood:	n/a	chr6:34937563-34937577
42	BACH1	chr6:34807689-34808041	K562	blood:	n/a	n/a
43	BACH1	chr6:34856735-34857116	H1-hESC	embryonic stem cell:	n/a	n/a
44	BACH1	chr6:34807714-34807998	H1-hESC	embryonic stem cell:	n/a	n/a
45	BATF	chr6:34880490-34880853	GM12878	blood:	n/a	chr6:34880751-34880760
46	BATF	chr6:34923346-34923637	GM12878	blood:	n/a	n/a
47	BATF	chr6:34880482-34880828	GM12878	blood:	n/a	chr6:34880751-34880760
48	BCL3	chr6:34855610-34855991	GM12878	blood:	n/a	n/a
49	BCL3	chr6:34890225-34890526	GM12878	blood:	n/a	n/a
50	BCLAF1	chr6:34880487-34880827	GM12878	blood:	n/a	n/a

(count:2323 , 50 per page) page: 1 2 3 4 5 6 7 ... 47

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:34856927-34856977	NH-A	brain:	n/a
2	chr6:34857663-34857713	GM19239	blood:	n/a
3	chr6:34856704-34856754	RPTEC	kidney:	n/a
4	chr6:34855789-34855839	HMEC	breast:	n/a
5	chr6:34919755-34919805	LNCaP	prostate:	n/a
6	chr6:34856927-34856977	NH-A	brain:	n/a
7	chr6:34857663-34857713	GM19239	blood:	n/a
8	chr6:34856704-34856754	RPTEC	kidney:	n/a
9	chr6:34855789-34855839	HMEC	breast:	n/a
10	chr6:34919755-34919805	LNCaP	prostate:	n/a
11	chr6:34857473-34857523	IMR90	lung:	fetal
12	chr6:34855408-34855458	K562	blood:	n/a
13	chr6:34941065-34941115	A549	lung:	n/a
14	chr6:34855470-34855520	BE2_C	brain:	n/a
15	chr6:34954867-34954917	NB4	blood:	n/a
16	chr6:34846110-34846160	HCT-116	colon:	n/a
17	chr6:34855887-34855937	AG10803	skin:	n/a
18	chr6:34879081-34879131	HRE	kidney:	n/a
19	chr6:34922135-34922185	AoSMC	blood vessel:	n/a
20	chr6:34853620-34853670	SK-N-MC	brain:	n/a
21	chr6:34895360-34895410	T-47D	breast:	n/a
22	chr6:34855839-34855889	HAEpiC	amniotic membrane:	n/a
23	chr6:34861541-34861591	HIPEpiC	eye:	n/a
24	chr6:34919755-34919805	MCF-7	breast:	n/a
25	chr6:34855839-34855889	HCF	heart:	n/a
26	chr6:34856897-34856947	SKMC	muscle:	n/a
27	chr6:34856158-34856208	MCF-7	breast:	n/a
28	chr6:34857018-34857068	HCM	heart:	n/a
29	chr6:34855797-34855847	NHBE	bronchial:	n/a
30	chr6:34856158-34856208	MCF10A-Er-Src	breast:	n/a
31	chr6:34857281-34857331	NT2-D1	testis:	n/a
32	chr6:34855635-34855685	SK-N-MC	brain:	n/a
33	chr6:34855980-34856030	HPAEpiC	pulmonary alveolar:	n/a
34	chr6:34856135-34856185	HCPEpiC	choroid plexus:	n/a
35	chr6:34855789-34855839	ProgFib	skin:	n/a
36	chr6:34857162-34857212	HEK293	kidney:	embryo
37	chr6:34855834-34855884	NHBE	bronchial:	n/a
38	chr6:34919755-34919805	Hepatocyte	liver:	n/a
39	chr6:34855789-34855839	PANC-1	pancreas:	n/a
40	chr6:34856704-34856754	HCPEpiC	choroid plexus:	n/a
41	chr6:34853620-34853670	BE2_C	brain:	n/a
42	chr6:34941065-34941115	SK-N-MC	brain:	n/a
43	chr6:34922135-34922185	HAEpiC	amniotic membrane:	n/a
44	chr6:34879081-34879131	Caco-2	colon:	n/a
45	chr6:34843579-34843629	NHBE	bronchial:	n/a
46	chr6:34855839-34855889	HRE	kidney:	n/a
47	chr6:34855789-34855839	T-47D	breast:	n/a
48	chr6:34802849-34802899	HCPEpiC	choroid plexus:	n/a
49	chr6:34919755-34919805	BE2_C	brain:	n/a
50	chr6:34852903-34852953	A549	lung:	n/a

(count:191 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr6:34893096..34895778-chr6:34897349..34899496,2	MCF-7	breast:
2	chr6:34853107..34854715-chr6:34857316..34859285,2	MCF-7	breast:
3	chr6:34951005..34953968-chr6:34956984..34958726,3	MCF-7	breast:
4	chr6:34944340..34947621-chr6:34949271..34952410,3	MCF-7	breast:
5	chr6:34758735..34762506-chr6:34853024..34858695,7	MCF-7	breast:
6	chr6:34952785..34956692-chr6:34957031..34961884,7	K562	blood:
7	chr6:34948492..34951112-chr6:34954153..34956114,2	K562	blood:
8	chr6:34855033..34857003-chr6:34864159..34866942,2	MCF-7	breast:
9	chr6:34833067..34835129-chr6:34854541..34856066,2	K562	blood:
10	chr17:56708594..56709416-chr6:34855776..34856394,2	Hela-S3	cervix:
11	chr6:34803335..34805787-chr6:34806399..34809385,2	K562	blood:
12	chr6:34879811..34884262-chr6:34884635..34888970,5	K562	blood:
13	chr6:34834250..34837156-chr6:34851105..34853013,3	MCF-7	breast:
14	chr6:34860202..34861936-chr6:34863788..34865891,2	MCF-7	breast:
15	chr6:34954285..34955179-chr6:35208270..35209520,3	K562	blood:
16	chr6:34947461..34949129-chr6:34952748..34955327,2	MCF-7	breast:
17	chr6:34891666..34893180-chr6:34904331..34907073,2	K562	blood:
18	chr6:34836775..34838347-chr6:34941205..34942985,2	MCF-7	breast:
19	chr3:156534879..156535549-chr6:34855191..34855795,2	Hela-S3	cervix:
20	chr6:34867094..34869111-chr6:34869478..34871062,2	K562	blood:
21	chr6:34854671..34856774-chr6:34870944..34872529,2	MCF-7	breast:
22	chr6:34927133..34929611-chr6:34935086..34937533,2	K562	blood:
23	chr6:34835870..34838689-chr6:34843706..34845674,2	K562	blood:
24	chr6:34855791..34858272-chr6:34864052..34865685,2	MCF-7	breast:
25	chr6:34951228..34953386-chr6:35100588..35103332,2	K562	blood:
26	chr6:34828677..34833050-chr6:34855355..34860063,5	K562	blood:
27	chr6:34956071..34958018-chr6:34959188..34960981,2	K562	blood:
28	chr6:34843479..34847323-chr6:34849401..34853884,4	MCF-7	breast:
29	chr6:34844007..34846659-chr6:34861219..34864126,3	K562	blood:
30	chr6:34803354..34806111-chr6:34854404..34857374,3	K562	blood:
31	chr6:34949753..34950779-chr6:35107305..35108332,7	MCF-7	breast:
32	chr6:34943502..34945906-chr6:34947769..34950337,3	K562	blood:
33	chr6:34937846..34940693-chr6:34953607..34956913,3	K562	blood:
34	chr6:34858926..34861792-chr6:34939953..34942289,2	MCF-7	breast:
35	chr6:34857178..34858858-chr6:35234868..35237489,2	MCF-7	breast:
36	chr6:34838773..34840454-chr6:34842472..34845232,2	MCF-7	breast:
37	chr6:34854944..34856631-chr6:34874568..34876971,2	MCF-7	breast:
38	chr6:34795232..34797224-chr6:34825817..34828260,2	K562	blood:
39	chr6:34865959..34867467-chr6:34869062..34871406,2	K562	blood:
40	chr6:34855243..34858373-chr6:34889287..34893128,3	K562	blood:
41	chr6:34853391..34855742-chr6:34918404..34920858,2	K562	blood:
42	chr6:34880699..34884444-chr6:34885944..34888970,5	K562	blood:
43	chr6:34854986..34858344-chr6:35226281..35229493,3	K562	blood:
44	chr6:34926256..34928319-chr6:34929581..34931130,2	K562	blood:
45	chr6:34887280..34889976-chr6:34890282..34893090,2	K562	blood:
46	chr6:34786614..34789043-chr6:34809197..34812183,2	K562	blood:
47	chr6:34887307..34889419-chr6:34914664..34917494,2	MCF-7	breast:
48	chr6:34834235..34837166-chr6:34838772..34840616,2	MCF-7	breast:
49	chr6:34822969..34823913-chr6:35208985..35209580,2	MCF-7	breast:
50	chr6:34758169..34761129-chr6:34802765..34804303,2	K562	blood:

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	UHRF1BP1	hsa-let-7e-5p	chr6:34843708-34843714
2	UHRF1BP1	hsa-let-7e-5p	chr6:34825126-34825148

Variant related genes	Relation type
ANKS1A	TF binding region
TAF11	TF binding region
ANKS1A	CpG island
TAF11	CpG island
ENSG00000064999	chromatin interactions
ENSG00000196547	chromatin interactions
ENSG00000212195	chromatin interactions
ENSG00000270800	chromatin interactions
ENSG00000064995	chromatin interactions
ENSG00000065060	chromatin interactions
ENSG00000174197	chromatin interactions
ENSG00000065029	chromatin interactions
ENSG00000159733	chromatin interactions
ENSG00000198755	chromatin interactions
ENSG00000197914	chromatin interactions
ENSG00000272374	chromatin interactions
ENSG00000125454	chromatin interactions
ENSG00000124562	chromatin interactions
ENSG00000202538	chromatin interactions
ENSG00000137309	chromatin interactions
ENSG00000264241	chromatin interactions
ENSG00000124614	chromatin interactions

Extended variants
information (count: 5377 )
Associated
traits (count: 107 )

Variant overlapped rSNPs/rCNVs (count:5377 , 50 per page) page: 1 2 3 4 5 6 7 ... 108

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs77256882	chr6:34802684-34802685	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
2	rs574032050	chr6:34802709-34802710	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs187722985	chr6:34802721-34802722	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs528600154	chr6:34802728-34802729	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs149250207	chr6:34802729-34802730	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs191458483	chr6:34802733-34802734	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs144416813	chr6:34802737-34802738	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs554008358	chr6:34802754-34802755	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs548933534	chr6:34802757-34802758	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs369195004	chr6:34802784-34802785	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs572315200	chr6:34802807-34802808	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs148062096	chr6:34802810-34802811	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs143769703	chr6:34802854-34802855	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs576121516	chr6:34802863-34802864	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs543131433	chr6:34802868-34802869	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs12213894	chr6:34802871-34802872	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs184364769	chr6:34802908-34802909	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs74879767	chr6:34802926-34802927	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs541344698	chr6:34802970-34802971	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs2296362	chr6:34802999-34803000	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
21	rs373402231	chr6:34803066-34803067	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs36007539	chr6:34803133-34803134	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs35753569	chr6:34803156-34803157	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs370920999	chr6:34803158-34803159	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs201149774	chr6:34803170-34803171	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs147218717	chr6:34803204-34803205	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs531189326	chr6:34803221-34803222	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs35078643	chr6:34803226-34803227	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs374513498	chr6:34803233-34803234	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs367679251	chr6:34803250-34803251	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs569733697	chr6:34803295-34803296	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs78059452	chr6:34803359-34803360	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs2296361	chr6:34803367-34803368	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
34	rs375857312	chr6:34803381-34803382	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs569600362	chr6:34803491-34803492	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs538278338	chr6:34803528-34803529	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs2296360	chr6:34803558-34803559	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
38	rs554046957	chr6:34803642-34803643	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs117211179	chr6:34803682-34803683	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs536533394	chr6:34803683-34803684	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs78218601	chr6:34803698-34803699	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs543071337	chr6:34803741-34803742	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs79866068	chr6:34803762-34803763	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs189724060	chr6:34803785-34803786	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs534755535	chr6:34803826-34803827	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs77408330	chr6:34803882-34803883	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs374504572	chr6:34803893-34803894	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs368398705	chr6:34803942-34803943	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs4259246	chr6:34803947-34803948	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
50	rs192844474	chr6:34803949-34803950	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:107)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Hepatocellular carcinoma	16750200	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Autoimmune disease	19135723	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Lung cancer	18438408	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:4351 , 50 per page) page: 1 2 3 4 5 6 7 ... 88

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:34764000-34803800	Weak transcription	HSMM	muscle
2	chr6:34779200-34807400	Weak transcription	A549	lung
3	chr6:34779400-34841000	Weak transcription	NH-A	brain
4	chr6:34781600-34824000	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr6:34783200-34807400	Weak transcription	Psoas Muscle	Psoas
6	chr6:34786600-34838800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
7	chr6:34787600-34807400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr6:34787800-34803600	Weak transcription	Esophagus	oesophagus
9	chr6:34788200-34831800	Weak transcription	HUVEC	blood vessel
10	chr6:34788400-34826600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr6:34788400-34826800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr6:34788400-34830800	Weak transcription	Fetal Heart	heart
13	chr6:34789000-34811000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr6:34789000-34811800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr6:34789400-34808200	Strong transcription	Liver	Liver
16	chr6:34789600-34803600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr6:34790000-34825000	Weak transcription	Stomach Mucosa	stomach
18	chr6:34791400-34806000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
19	chr6:34791800-34803600	Weak transcription	Colonic Mucosa	Colon
20	chr6:34792000-34803200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr6:34792000-34803400	Weak transcription	Brain Substantia Nigra	brain
22	chr6:34792000-34803800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr6:34792000-34807600	Weak transcription	Gastric	stomach
24	chr6:34792800-34803000	Weak transcription	Pancreas	Pancrea
25	chr6:34794000-34803000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr6:34797400-34824600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
27	chr6:34797800-34803200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
28	chr6:34797800-34803200	Weak transcription	Brain Angular Gyrus	brain
29	chr6:34797800-34819800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr6:34798000-34803200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
31	chr6:34800000-34805000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr6:34800000-34810000	Strong transcription	Fetal Intestine Large	intestine
33	chr6:34800200-34806200	Strong transcription	HepG2	liver
34	chr6:34800400-34804400	Strong transcription	Rectal Mucosa Donor 31	rectum
35	chr6:34800600-34805200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr6:34800600-34811600	Strong transcription	Fetal Thymus	thymus
37	chr6:34800800-34804400	Strong transcription	GM12878-XiMat	blood
38	chr6:34800800-34804800	Strong transcription	Hela-S3	cervix
39	chr6:34800800-34806200	Strong transcription	Primary T cells fromperipheralblood	blood
40	chr6:34800800-34806400	Strong transcription	Primary T cells from cord blood	blood
41	chr6:34800800-34806800	Strong transcription	HUES6 Cell Line	embryonic stem cell
42	chr6:34800800-34825200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
43	chr6:34801000-34804600	Strong transcription	Fetal Stomach	stomach
44	chr6:34801200-34811000	Strong transcription	Fetal Intestine Small	intestine
45	chr6:34801400-34804400	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
46	chr6:34801400-34804400	Strong transcription	Sigmoid Colon	Sigmoid Colon
47	chr6:34801600-34806400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
48	chr6:34801800-34804400	Strong transcription	Primary B cells from cord blood	blood
49	chr6:34801800-34805800	Strong transcription	Fetal Muscle Trunk	muscle
50	chr6:34802000-34802800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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