Variant report

Variant	nsv1034210
Chromosome Location	chr8:107796489-108384102
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3415)
CpG islands
(count:1284)
Chromatin interactive
region (count:199)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3415 , 50 per page) page: 1 2 3 4 5 6 7 ... 69

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:108348924-108349468	K562	blood:	n/a	n/a
2	ARID3A	chr8:108356444-108357357	K562	blood:	n/a	n/a
3	ARID3A	chr8:108128388-108129306	HepG2	liver:	n/a	n/a
4	ARID3A	chr8:108346555-108347811	K562	blood:	n/a	n/a
5	ARID3A	chr8:108335073-108335222	K562	blood:	n/a	n/a
6	ARID3A	chr8:108317027-108317777	K562	blood:	n/a	n/a
7	ARID3A	chr8:108337533-108337702	K562	blood:	n/a	n/a
8	ARID3A	chr8:108327268-108328057	K562	blood:	n/a	n/a
9	ARID3A	chr8:108322085-108323462	K562	blood:	n/a	chr8:108322161-108322177
10	ARID3A	chr8:108307010-108307086	K562	blood:	n/a	n/a
11	ARID3A	chr8:107839351-107839525	HepG2	liver:	n/a	n/a
12	ARID3A	chr8:108299697-108300171	K562	blood:	n/a	n/a
13	ARID3A	chr8:108333818-108334046	K562	blood:	n/a	n/a
14	ARID3A	chr8:107847369-107847671	HepG2	liver:	n/a	n/a
15	ATF1	chr8:108317326-108317759	K562	blood:	n/a	n/a
16	ATF1	chr8:108322486-108323333	K562	blood:	n/a	n/a
17	ATF1	chr8:108130183-108130443	K562	blood:	n/a	n/a
18	ATF1	chr8:107970799-107971055	K562	blood:	n/a	n/a
19	ATF1	chr8:107813463-107813624	K562	blood:	n/a	n/a
20	ATF1	chr8:108184522-108184787	K562	blood:	n/a	n/a
21	ATF1	chr8:108319459-108319785	K562	blood:	n/a	n/a
22	ATF1	chr8:108336368-108336835	K562	blood:	n/a	n/a
23	ATF1	chr8:108160223-108160605	K562	blood:	n/a	n/a
24	ATF1	chr8:108335129-108335332	K562	blood:	n/a	n/a
25	ATF1	chr8:108203175-108203176	K562	blood:	n/a	n/a
26	ATF1	chr8:108343912-108344454	K562	blood:	n/a	n/a
27	ATF1	chr8:108300549-108300640	K562	blood:	n/a	n/a
28	ATF1	chr8:108294452-108294537	K562	blood:	n/a	n/a
29	ATF1	chr8:108318725-108318911	K562	blood:	n/a	n/a
30	ATF1	chr8:108080937-108081234	K562	blood:	n/a	n/a
31	ATF1	chr8:108299729-108300273	K562	blood:	n/a	n/a
32	ATF1	chr8:108327332-108327831	K562	blood:	n/a	n/a
33	ATF1	chr8:108376243-108376331	K562	blood:	n/a	n/a
34	ATF1	chr8:108155224-108155260	K562	blood:	n/a	n/a
35	ATF1	chr8:108220761-108220901	K562	blood:	n/a	n/a
36	ATF1	chr8:107991251-107991436	K562	blood:	n/a	n/a
37	ATF1	chr8:107944698-107944731	K562	blood:	n/a	n/a
38	ATF1	chr8:108227519-108227917	K562	blood:	n/a	n/a
39	ATF1	chr8:108190858-108190862	K562	blood:	n/a	n/a
40	ATF1	chr8:108356405-108356784	K562	blood:	n/a	n/a
41	ATF2	chr8:107869938-107870367	GM12878	blood:	n/a	n/a
42	ATF3	chr8:108128510-108129327	A549	lung:	n/a	n/a
43	ATF3	chr8:107869846-107870396	A549	lung:	n/a	chr8:107870180-107870190 chr8:107870177-107870190 chr8:107870180-107870190 chr8:107870177-107870187 chr8:107870178-107870191 chr8:107870180-107870188 chr8:107870180-107870187 chr8:107870179-107870187 chr8:107870178-107870189 chr8:107870176-107870191 chr8:107870178-107870189
44	ATF3	chr8:107875874-107876817	A549	lung:	n/a	n/a
45	ATF3	chr8:107875898-107876687	A549	lung:	n/a	n/a
46	ATF3	chr8:108128397-108129326	A549	lung:	n/a	n/a
47	ATF3	chr8:107869820-107870425	A549	lung:	n/a	chr8:107870180-107870190 chr8:107870177-107870190 chr8:107870180-107870190 chr8:107870177-107870187 chr8:107870178-107870191 chr8:107870180-107870188 chr8:107870180-107870187 chr8:107870179-107870187 chr8:107870178-107870189 chr8:107870176-107870191 chr8:107870178-107870189
48	ATF3	chr8:108152827-108153465	A549	lung:	n/a	n/a
49	ATF3	chr8:108322410-108322926	K562	blood:	n/a	n/a
50	BACH1	chr8:108361212-108361266	K562	blood:	n/a	n/a

(count:1284 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:107890251-107890301	HRE	kidney:	n/a
2	chr8:107890251-107890301	SK-N-MC	brain:	n/a
3	chr8:108370910-108370960	HEK293	kidney:	embryo
4	chr8:107890251-107890301	HRE	kidney:	n/a
5	chr8:107890251-107890301	SK-N-MC	brain:	n/a
6	chr8:108370910-108370960	HEK293	kidney:	embryo
7	chr8:108238734-108238784	K562	blood:	n/a
8	chr8:108314948-108314998	AoSMC	blood vessel:	n/a
9	chr8:107870405-107870455	MCF10A-Er-Src	breast:	n/a
10	chr8:108253163-108253213	ovcar-3	ovarian:	n/a
11	chr8:108314948-108314998	SK-N-SH_RA	brain:	n/a
12	chr8:108298379-108298429	AG10803	skin:	n/a
13	chr8:108253163-108253213	Hepatocyte	liver:	n/a
14	chr8:107994813-107994863	AG04450	lung:	fetal
15	chr8:108359437-108359487	K562	blood:	n/a
16	chr8:108144638-108144688	MCF-7	breast:	n/a
17	chr8:108344200-108344250	BJ	skin:	n/a
18	chr8:108163998-108164048	HIPEpiC	eye:	n/a
19	chr8:108239870-108239920	U87	brain:	n/a
20	chr8:108359437-108359487	HRPEpiC	eye:	n/a
21	chr8:108344200-108344250	AG04449	skin:	fetal
22	chr8:108370910-108370960	HEEpiC	esophagus:	n/a
23	chr8:107870405-107870455	SK-N-SH_RA	brain:	n/a
24	chr8:107876626-107876676	HCT-116	colon:	n/a
25	chr8:108298379-108298429	NT2-D1	testis:	n/a
26	chr8:108080760-108080810	HRPEpiC	eye:	n/a
27	chr8:107876626-107876676	NHDF-neo	bronchial:	n/a
28	chr8:107876626-107876676	A549	lung:	n/a
29	chr8:108344200-108344250	HAEpiC	amniotic membrane:	n/a
30	chr8:107870405-107870455	HPAEpiC	pulmonary alveolar:	n/a
31	chr8:108359437-108359487	GM12892	blood:	n/a
32	chr8:108178448-108178498	MCF-7	breast:	n/a
33	chr8:108144638-108144688	GM12892	blood:	n/a
34	chr8:108178488-108178538	HPAEpiC	pulmonary alveolar:	n/a
35	chr8:108314948-108314998	HUVEC	blood vessel:	n/a
36	chr8:107994813-107994863	HUVEC	blood vessel:	n/a
37	chr8:108253163-108253213	HCF	heart:	n/a
38	chr8:108298379-108298429	PANC-1	pancreas:	n/a
39	chr8:108298379-108298429	ovcar-3	ovarian:	n/a
40	chr8:108314948-108314998	NH-A	brain:	n/a
41	chr8:107870405-107870455	T-47D	breast:	n/a
42	chr8:108359437-108359487	AG04450	lung:	fetal
43	chr8:107937633-107937683	Jurkat	blood:	n/a
44	chr8:108178448-108178498	HAEpiC	amniotic membrane:	n/a
45	chr8:108239870-108239920	HMEC	breast:	n/a
46	chr8:107994813-107994863	ECC-1	luminal epithelium:	n/a
47	chr8:107890251-107890301	RPTEC	kidney:	n/a
48	chr8:108253163-108253213	K562	blood:	n/a
49	chr8:108314948-108314998	HRCEpiC	kidney:	n/a
50	chr8:108178448-108178498	GM12891	blood:	n/a

(count:199 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr8:107963274..107965164-chr8:107984156..107985885,2	K562	blood:
2	chr8:107942969..107944882-chr8:107947397..107950268,2	MCF-7	breast:
3	chr8:108349228..108350761-chr8:108352462..108354445,2	K562	blood:
4	chr8:108310092..108312826-chr8:108342773..108344986,2	K562	blood:
5	chr8:107777185..107778453-chr8:107844735..107846577,8	MCF-7	breast:
6	chr8:108046046..108048588-chr8:108049288..108050905,2	K562	blood:
7	chr8:107936207..107938008-chr8:107942001..107944516,2	MCF-7	breast:
8	chr8:108237961..108240814-chr8:108249385..108251392,2	K562	blood:
9	chr8:108278229..108280437-chr8:108281922..108284571,2	K562	blood:
10	chr8:108242225..108244174-chr8:108244733..108247005,2	K562	blood:
11	chr8:108316746..108319440-chr8:108325367..108326969,2	K562	blood:
12	chr8:108220971..108223007-chr8:108226339..108229011,2	K562	blood:
13	chr8:108161198..108164148-chr8:108166546..108170354,3	K562	blood:
14	chr8:107776853..107777682-chr8:107843674..107844419,2	MCF-7	breast:
15	chr8:108311610..108313878-chr8:108319645..108322310,2	MCF-7	breast:
16	chr1:38477248..38478946-chr8:108022853..108025135,2	MCF-7	breast:
17	chr8:108203846..108205838-chr8:108206200..108208879,2	MCF-7	breast:
18	chr20:46012813..46013377-chr8:107845402..107845925,2	MCF-7	breast:
19	chr8:107841111..107842679-chr8:107845386..107847419,2	MCF-7	breast:
20	chr8:107716793..107717867-chr8:107868568..107869413,5	MCF-7	breast:
21	chr8:108312705..108315142-chr8:108317270..108319695,2	MCF-7	breast:
22	chr8:108230563..108232066-chr8:108238210..108240412,2	K562	blood:
23	chr8:108304086..108305949-chr8:108321318..108324299,2	K562	blood:
24	chr8:107777116..107778171-chr8:107868404..107869398,4	MCF-7	breast:
25	chr8:108364652..108367113-chr8:108367728..108369614,2	K562	blood:
26	chr8:108325638..108328700-chr8:108330925..108333725,3	K562	blood:
27	chr8:108303036..108307158-chr8:108307598..108310209,4	K562	blood:
28	chr8:108320003..108323467-chr8:108344820..108346729,3	K562	blood:
29	chr8:108327353..108329181-chr8:108342640..108344430,2	K562	blood:
30	chr8:108325638..108328700-chr8:108330925..108333725,3	K562	blood:
31	chr8:108236936..108239830-chr8:108242541..108244471,2	K562	blood:
32	chr8:107844267..107847790-chr8:107864374..107867207,3	MCF-7	breast:
33	chr8:107717278..107717963-chr8:107868271..107869380,4	K562	blood:
34	chr8:108306316..108309008-chr8:108341130..108342850,2	K562	blood:
35	chr8:108297619..108300531-chr8:108300720..108302749,2	K562	blood:
36	chr8:107858296..107858832-chr8:107965934..107966511,2	MCF-7	breast:
37	chr8:108353442..108355542-chr8:108360326..108364497,3	K562	blood:
38	chr8:108270297..108272923-chr8:108276260..108278146,2	K562	blood:
39	chr8:107774998..107776443-chr8:107844921..107846410,11	MCF-7	breast:
40	chr8:107936207..107938008-chr8:107942001..107944516,2	MCF-7	breast:
41	chr8:108332354..108335105-chr8:108336203..108338362,2	K562	blood:
42	chr8:107823015..107825825-chr8:107828969..107830508,2	MCF-7	breast:
43	chr8:108304210..108306382-chr8:108346732..108349257,2	K562	blood:
44	chr8:108315162..108317666-chr8:108340503..108343303,2	K562	blood:
45	chr8:107992879..107994414-chr8:107998653..108000399,2	MCF-7	breast:
46	chr8:108321424..108323039-chr8:108346971..108349140,2	K562	blood:
47	chr8:107776572..107779204-chr8:107860586..107863485,2	K562	blood:
48	chr8:108338212..108341049-chr8:108453971..108455686,2	K562	blood:
49	chr8:106952193..106952705-chr8:107868814..107869363,2	MCF-7	breast:
50	chr8:108080728..108081482-chr8:108544139..108545086,2	MCF-7	breast:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ANGPT1-1	chr8:108184556-108184583	NONHSAT128258
2	lnc-ANGPT1-1	chr8:108178377-108178524	NONHSAT128258
3	lnc-ANGPT1-1	chr8:108178104-108178267	NONHSAT128258

No data

Variant related genes	Relation type
HMGB1P46	TF binding region
ENSG00000211995	TF binding region
ANGPT1	TF binding region
HMGB1P46	CpG island
ENSG00000211995	CpG island
ANGPT1	CpG island
ENSG00000183520	chromatin interactions
ENSG00000154188	chromatin interactions
ENSG00000104408	chromatin interactions
ENSG00000211995	chromatin interactions

Extended variants
information (count: 19394 )
Associated
traits (count: 103 )

Variant overlapped rSNPs/rCNVs (count:19394 , 50 per page) page: 1 2 3 4 5 6 7 ... 388

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs34327140	chr8:107796739-107796740	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
2	rs1385157	chr8:107796783-107796784	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs74326870	chr8:107796842-107796843	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs572848768	chr8:107796876-107796877	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs559045850	chr8:107796917-107796918	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs572528157	chr8:107796950-107796951	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs192524760	chr8:107796960-107796961	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs386728590	chr8:107797043-107797044	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs188153805	chr8:107797044-107797045	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs114648709	chr8:107797075-107797076	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs116613846	chr8:107797087-107797088	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs574326877	chr8:107797113-107797114	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs114280107	chr8:107797120-107797121	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs541658609	chr8:107797127-107797128	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs561554169	chr8:107797133-107797134	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs138638437	chr8:107797150-107797151	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs574803169	chr8:107797291-107797292	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs542968638	chr8:107797342-107797343	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs531784766	chr8:107797358-107797359	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs562966326	chr8:107797366-107797367	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs377169432	chr8:107797387-107797388	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs540930684	chr8:107797397-107797398	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs181977287	chr8:107797441-107797442	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs532755411	chr8:107797447-107797448	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs532045010	chr8:107797451-107797452	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs186204838	chr8:107797459-107797460	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs189195974	chr8:107797546-107797547	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs530037505	chr8:107797582-107797583	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs182070697	chr8:107797587-107797588	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs35609451	chr8:107797588-107797589	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs2930474	chr8:107797594-107797595	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs533791783	chr8:107797654-107797655	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs558448967	chr8:107797765-107797766	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs376119361	chr8:107797785-107797786	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs201406199	chr8:107797789-107797790	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs2930475	chr8:107797800-107797801	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs75898056	chr8:107797881-107797882	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs6991089	chr8:107797892-107797893	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs186546702	chr8:107797965-107797966	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs574512336	chr8:107797979-107797980	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs80228491	chr8:107798002-107798003	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs2449832	chr8:107798040-107798041	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs369870922	chr8:107798043-107798044	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs540893779	chr8:107798111-107798112	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs565606290	chr8:107798129-107798130	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs532576803	chr8:107798177-107798178	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs142771481	chr8:107798228-107798229	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs562832985	chr8:107798300-107798301	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs530094651	chr8:107798468-107798469	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs191459752	chr8:107798507-107798508	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:103)

Disease	PMID	Source
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Gastric cancer	17908304	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
small cell lung cancer	20016488	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
Colorectal cancer	16774939	CNVD
Autosomal-dominant progressive external ophthalmoplegia	19664747	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Multiple myeloma	16461302	CNVD
Sezary syndrome	18413736	CNVD
Breast cancer	21611746	CNVD
Developmental delay	21147756	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Breast cancer	21364760	CNVD
Gastric cancer	22539939	CNVD
Non-small cell lung cancer	19010865	CNVD
Colorectal cancer	21645411	CNVD
Multiple myeloma	17550852	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Renal cell carcinoma	21215367	CNVD
Prostate cancer	22341455	CNVD

Chromatin state (count:2664 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:107783200-107798400	Weak transcription	Colon Smooth Muscle	Colon
2	chr8:107792200-107803600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr8:107795400-107796800	Enhancers	Skeletal Muscle Female	skeletal muscle
4	chr8:107795400-107797000	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr8:107796000-107797000	Enhancers	Skeletal Muscle Male	skeletal muscle
6	chr8:107796200-107796800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
7	chr8:107796800-107797000	Enhancers	Monocytes-CD14+_RO01746	blood
8	chr8:107796800-107798200	Weak transcription	Skeletal Muscle Female	skeletal muscle
9	chr8:107797000-107797200	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr8:107797200-107799800	Enhancers	Skeletal Muscle Male	skeletal muscle
11	chr8:107797600-107799600	Enhancers	Cortex derived primary cultured neurospheres	brain
12	chr8:107798000-107799600	Enhancers	Adipose Nuclei	Adipose
13	chr8:107798200-107798400	Enhancers	Skeletal Muscle Female	skeletal muscle
14	chr8:107798200-107799600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr8:107798200-107799600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
16	chr8:107798400-107798800	Weak transcription	Skeletal Muscle Female	skeletal muscle
17	chr8:107798400-107799400	Enhancers	Colon Smooth Muscle	Colon
18	chr8:107798800-107799000	Enhancers	Skeletal Muscle Female	skeletal muscle
19	chr8:107799000-107799400	Enhancers	Fetal Muscle Leg	muscle
20	chr8:107799000-107799400	Enhancers	Left Ventricle	heart
21	chr8:107799000-107799400	Enhancers	Ovary	ovary
22	chr8:107799000-107799400	Enhancers	Psoas Muscle	Psoas
23	chr8:107799000-107799400	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
24	chr8:107799000-107799600	Enhancers	Fetal Stomach	stomach
25	chr8:107799000-107799800	Enhancers	Fetal Heart	heart
26	chr8:107799200-107799600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr8:107799400-107799800	Enhancers	Skeletal Muscle Female	skeletal muscle
28	chr8:107803800-107806400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr8:107805000-107806600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
30	chr8:107806000-107807000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr8:107806200-107808400	Enhancers	Primary hematopoietic stem cells short term culture	blood
32	chr8:107806200-107809400	Enhancers	Primary hematopoietic stem cells	blood
33	chr8:107806400-107806600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
34	chr8:107806400-107807600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
35	chr8:107806600-107807000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
36	chr8:107806600-107807400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
37	chr8:107806600-107808400	Enhancers	HUVEC	blood vessel
38	chr8:107806600-107809600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
39	chr8:107806800-107808400	Enhancers	Primary T cells from cord blood	blood
40	chr8:107807000-107807600	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr8:107807000-107807600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
42	chr8:107807000-107807600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
43	chr8:107807000-107807600	Enhancers	Fetal Stomach	stomach
44	chr8:107807000-107807800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
45	chr8:107807000-107807800	Enhancers	Fetal Kidney	kidney
46	chr8:107807200-107807600	Enhancers	Primary T helper cells PMA-I stimulated	--
47	chr8:107807200-107807600	Enhancers	Aorta	Aorta
48	chr8:107807200-107807800	Enhancers	HUES64 Cell Line	embryonic stem cell
49	chr8:107807200-107808400	Enhancers	Fetal Thymus	thymus
50	chr8:107807400-107807800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links