Variant report

Variant	nsv1040540
Chromosome Location	chr14:35537481-35724753
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2059)
CpG islands
(count:1101)
Chromatin interactive
region (count:223)
LncRNA
region (count:27)
Mature miRNA
region (count: 0)
miRNA target
sites (count:6)

(count:2059 , 50 per page) page: 1 2 3 4 5 6 7 ... 42

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr14:35590633-35592472	HepG2	liver:	n/a	chr14:35591480-35591488
2	ARID3A	chr14:35628515-35629631	HepG2	liver:	n/a	n/a
3	ARID3A	chr14:35537558-35537700	HepG2	liver:	n/a	n/a
4	ARID3A	chr14:35658657-35659080	HepG2	liver:	n/a	n/a
5	ARID3A	chr14:35609838-35610282	HepG2	liver:	n/a	n/a
6	ARID3A	chr14:35682775-35683608	HepG2	liver:	n/a	n/a
7	ARID3A	chr14:35628114-35628276	HepG2	liver:	n/a	n/a
8	ARID3A	chr14:35698749-35699034	HepG2	liver:	n/a	n/a
9	ARID3A	chr14:35615869-35616033	HepG2	liver:	n/a	n/a
10	ARID3A	chr14:35547257-35547542	HepG2	liver:	n/a	n/a
11	ARID3A	chr14:35591026-35591699	K562	blood:	n/a	chr14:35591480-35591488
12	ARID3A	chr14:35613218-35613555	HepG2	liver:	n/a	n/a
13	ATF1	chr14:35590856-35592000	K562	blood:	n/a	n/a
14	ATF1	chr14:35629215-35629517	K562	blood:	n/a	n/a
15	ATF2	chr14:35723934-35724302	GM12878	blood:	n/a	n/a
16	ATF2	chr14:35590769-35591863	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF2	chr14:35590456-35592108	GM12878	blood:	n/a	n/a
18	ATF2	chr14:35590839-35591575	H1-hESC	embryonic stem cell:	n/a	n/a
19	ATF2	chr14:35591095-35591822	GM12878	blood:	n/a	n/a
20	ATF3	chr14:35591326-35591632	K562	blood:	n/a	chr14:35591484-35591504
21	ATF3	chr14:35591254-35591787	A549	lung:	n/a	chr14:35591484-35591504
22	ATF3	chr14:35629129-35629373	K562	blood:	n/a	n/a
23	ATF3	chr14:35590988-35592153	HepG2	liver:	n/a	chr14:35591484-35591504
24	ATF3	chr14:35591368-35591602	GM12878	blood:	n/a	chr14:35591484-35591504
25	ATF3	chr14:35591069-35591891	HepG2	liver:	n/a	chr14:35591484-35591504
26	ATF3	chr14:35591062-35591829	GM12878	blood:	n/a	chr14:35591484-35591504
27	ATF3	chr14:35591305-35591773	H1-hESC	embryonic stem cell:	n/a	chr14:35591484-35591504
28	BACH1	chr14:35705679-35705717	H1-hESC	embryonic stem cell:	n/a	n/a
29	BATF	chr14:35629074-35629473	GM12878	blood:	n/a	chr14:35629286-35629297 chr14:35629287-35629297
30	BATF	chr14:35723939-35724282	GM12878	blood:	n/a	n/a
31	BATF	chr14:35654077-35654389	GM12878	blood:	n/a	n/a
32	BATF	chr14:35591663-35591964	GM12878	blood:	n/a	n/a
33	BATF	chr14:35629052-35629485	GM12878	blood:	n/a	chr14:35629286-35629297 chr14:35629287-35629297
34	BATF	chr14:35654130-35654416	GM12878	blood:	n/a	n/a
35	BCL11A	chr14:35629109-35629431	GM12878	blood:	n/a	chr14:35629290-35629299 chr14:35629289-35629298
36	BCL11A	chr14:35723979-35724282	GM12878	blood:	n/a	n/a
37	BCL11A	chr14:35723969-35724182	GM12878	blood:	n/a	n/a
38	BCL3	chr14:35628914-35629626	A549	lung:	n/a	chr14:35629290-35629299 chr14:35629289-35629298
39	BCL3	chr14:35590607-35591936	A549	lung:	n/a	n/a
40	BCL3	chr14:35590950-35592103	A549	lung:	n/a	n/a
41	BCLAF1	chr14:35723999-35724323	GM12878	blood:	n/a	n/a
42	BCLAF1	chr14:35590896-35592186	GM12878	blood:	n/a	n/a
43	BCLAF1	chr14:35590870-35592203	GM12878	blood:	n/a	n/a
44	BHLHE40	chr14:35723918-35724258	GM12878	blood:	n/a	n/a
45	BHLHE40	chr14:35591280-35591665	A549	lung:	n/a	n/a
46	BHLHE40	chr14:35666093-35666107	GM12878	blood:	n/a	n/a
47	BHLHE40	chr14:35590749-35592231	HepG2	liver:	n/a	n/a
48	BHLHE40	chr14:35590781-35592288	GM12878	blood:	n/a	n/a
49	BHLHE40	chr14:35628362-35628811	HepG2	liver:	n/a	n/a
50	BHLHE40	chr14:35590665-35592190	K562	blood:	n/a	n/a

(count:1101 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr14:35587750-35587800	GM06990	blood:	n/a
2	chr14:35591473-35591523	MCF10A-Er-Src	breast:	n/a
3	chr14:35591252-35591302	HNPCEpiC	eye:	n/a
4	chr14:35587750-35587800	GM06990	blood:	n/a
5	chr14:35591473-35591523	MCF10A-Er-Src	breast:	n/a
6	chr14:35591252-35591302	HNPCEpiC	eye:	n/a
7	chr14:35583718-35583768	HIPEpiC	eye:	n/a
8	chr14:35591572-35591622	HCF	heart:	n/a
9	chr14:35683834-35683884	HEK293	kidney:	embryo
10	chr14:35587750-35587800	NB4	blood:	n/a
11	chr14:35587750-35587800	NHBE	bronchial:	n/a
12	chr14:35589334-35589384	Caco-2	colon:	n/a
13	chr14:35591781-35591831	HUVEC	blood vessel:	n/a
14	chr14:35591252-35591302	HepG2	liver:	n/a
15	chr14:35583718-35583768	HRPEpiC	eye:	n/a
16	chr14:35591779-35591829	H1-hESC	embryonic stem cell:	embryo
17	chr14:35592116-35592166	SK-N-MC	brain:	n/a
18	chr14:35591252-35591302	HEK293	kidney:	embryo
19	chr14:35591840-35591890	T-47D	breast:	n/a
20	chr14:35591523-35591573	LNCaP	prostate:	n/a
21	chr14:35583718-35583768	AoSMC	blood vessel:	n/a
22	chr14:35591572-35591622	GM19239	blood:	n/a
23	chr14:35540926-35540976	HAEpiC	amniotic membrane:	n/a
24	chr14:35591572-35591622	Caco-2	colon:	n/a
25	chr14:35592116-35592166	HMEC	breast:	n/a
26	chr14:35629311-35629361	HMEC	breast:	n/a
27	chr14:35540926-35540976	SKMC	muscle:	n/a
28	chr14:35591572-35591622	AG09319	gingival:	n/a
29	chr14:35587750-35587800	SKMC	muscle:	n/a
30	chr14:35591695-35591745	Jurkat	blood:	n/a
31	chr14:35594356-35594406	SK-N-SH_RA	brain:	n/a
32	chr14:35591473-35591523	K562	blood:	n/a
33	chr14:35591473-35591523	HCT-116	colon:	n/a
34	chr14:35589334-35589384	GM12892	blood:	n/a
35	chr14:35591523-35591573	ovcar-3	ovarian:	n/a
36	chr14:35629311-35629361	AG04449	skin:	fetal
37	chr14:35591523-35591573	BE2_C	brain:	n/a
38	chr14:35591951-35592001	HIPEpiC	eye:	n/a
39	chr14:35592116-35592166	GM12892	blood:	n/a
40	chr14:35591523-35591573	GM12892	blood:	n/a
41	chr14:35591951-35592001	U87	brain:	n/a
42	chr14:35591252-35591302	AG09319	gingival:	n/a
43	chr14:35594356-35594406	NHDF-neo	bronchial:	n/a
44	chr14:35587750-35587800	A549	lung:	n/a
45	chr14:35589334-35589384	NB4	blood:	n/a
46	chr14:35540926-35540976	HL-60	blood:	n/a
47	chr14:35589334-35589384	MCF10A-Er-Src	breast:	n/a
48	chr14:35591840-35591890	AoSMC	blood vessel:	n/a
49	chr14:35540926-35540976	RPTEC	kidney:	n/a
50	chr14:35591779-35591829	SKMC	muscle:	n/a

(count:223 , 50 per page) page: 1 2 3 4 5

No.	Distal block	Cell Line	Cell type
1	chr14:35698822..35700476-chr14:35705196..35707061,2	MCF-7	breast:
2	chr14:35542856..35545379-chr14:35545884..35547837,2	K562	blood:
3	chr14:35565651..35568101-chr14:35571541..35574493,2	K562	blood:
4	chr14:35706016..35708901-chr14:35873653..35875984,5	MCF-7	breast:
5	chr14:35589196..35594400-chr14:35871301..35877730,13	MCF-7	breast:
6	chr14:35701125..35703592-chr14:35762146..35764422,2	MCF-7	breast:
7	chr14:35579884..35582908-chr14:35589580..35593400,4	MCF-7	breast:
8	chr14:35575108..35577004-chr14:35580748..35582498,2	MCF-7	breast:
9	chr14:35724152..35726170-chr14:35727566..35729303,2	K562	blood:
10	chr1:45196086..45196947-chr14:35590878..35591536,2	Hela-S3	cervix:
11	chr14:35568810..35572401-chr14:35587846..35592624,4	MCF-7	breast:
12	chr14:35684138..35684885-chr14:35882171..35883033,3	MCF-7	breast:
13	chr14:35624804..35627276-chr14:35631634..35634106,2	K562	blood:
14	chr14:35688326..35690057-chr14:35697484..35700212,2	MCF-7	breast:
15	chr14:35636279..35638693-chr14:35643286..35645234,2	K562	blood:
16	chr14:35698505..35699335-chr14:35882619..35883340,2	MCF-7	breast:
17	chr14:35593618..35595181-chr14:35595674..35598084,2	K562	blood:
18	chr14:35542856..35545379-chr14:35545884..35547837,2	K562	blood:
19	chr14:35630047..35632589-chr14:35700698..35702553,2	MCF-7	breast:
20	chr14:35516520..35518836-chr14:35536161..35537991,2	K562	blood:
21	chr14:35665653..35668346-chr14:35670168..35673640,4	K562	blood:
22	chr14:35688941..35691439-chr14:35716657..35719579,2	MCF-7	breast:
23	chr14:35582794..35584767-chr14:35585993..35588866,2	MCF-7	breast:
24	chr14:35585231..35589339-chr14:35589469..35593386,5	K562	blood:
25	chr14:35669178..35671456-chr14:35674272..35676613,2	MCF-7	breast:
26	chr14:35593883..35596766-chr14:35627445..35630133,2	MCF-7	breast:
27	chr14:35695193..35706000-chr14:35866255..35879159,42	MCF-7	breast:
28	chr14:35636158..35638112-chr14:35872373..35874812,2	MCF-7	breast:
29	chr14:35670539..35672448-chr14:35874285..35876170,2	MCF-7	breast:
30	chr14:35450042..35454830-chr14:35589505..35593708,8	K562	blood:
31	chr14:35591181..35592726-chr14:35595848..35598610,3	MCF-7	breast:
32	chr14:35673298..35676269-chr14:35873221..35876037,2	MCF-7	breast:
33	chr14:35698439..35699139-chr14:35882158..35883164,4	MCF-7	breast:
34	chr14:35576972..35579105-chr14:35589747..35591526,2	MCF-7	breast:
35	chr14:35680464..35682083-chr14:35684601..35686665,2	MCF-7	breast:
36	chr14:35514347..35518167-chr14:35589018..35591815,3	K562	blood:
37	chr14:35705860..35707392-chr14:35712096..35713861,2	MCF-7	breast:
38	chr14:35609923..35610592-chr14:35882131..35883118,2	K562	blood:
39	chr14:35589827..35591407-chr14:35592886..35594751,2	K562	blood:
40	chr14:35665653..35668346-chr14:35670168..35673640,4	K562	blood:
41	chr14:35545880..35548959-chr14:35590371..35593257,4	MCF-7	breast:
42	chr14:35517575..35519344-chr14:35683138..35684908,2	MCF-7	breast:
43	chr14:35622836..35624862-chr14:35627590..35631684,4	MCF-7	breast:
44	chr14:35560221..35562617-chr14:35563701..35566461,3	MCF-7	breast:
45	chr14:35591519..35595247-chr14:35614813..35617284,3	MCF-7	breast:
46	chr14:35687707..35690246-chr14:35690578..35692404,2	MCF-7	breast:
47	chr14:35557782..35559646-chr14:35560670..35562491,2	MCF-7	breast:
48	chr14:35500095..35502926-chr14:35557815..35560264,2	MCF-7	breast:
49	chr14:35680464..35682083-chr14:35684601..35686665,2	MCF-7	breast:
50	chr14:35589606..35593451-chr14:35594804..35598522,5	K562	blood:

(count:27 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RP11-173D9.3.1-3	chr14:35703077-35703223	l_963_chr14:35700899-35775195_brain
2	lnc-BAZ1A-3	chr14:35591108-35591185	NONHSAT036363
3	lnc-PPP2R3C-3	chr14:35651558-35651951	uc_373_-
4	lnc-FAM177A1-4	chr14:35651558-35651951	uc_373_+
5	lnc-RP11-173D9.3.1-1	chr14:35579101-35579166	ENSG00000247658
6	lnc-PPP2R3C-4	chr14:35715251-35715712	l_962_chr14:35668508-35676460_thyroid
7	lnc-BAZ1A-3	chr14:35579129-35579835	NONHSAT036363
8	lnc-PPP2R3C-4	chr14:35701581-35701640	l_962_chr14:35668508-35676460_thyroid
9	lnc-PPP2R3C-2	chr14:35627110-35628305	NONHSAT036367
10	lnc-PPP2R3C-4	chr14:35692695-35692853	l_962_chr14:35668508-35676460_thyroid
11	lnc-PPP2R3C-4	chr14:35691819-35692693	l_962_chr14:35668508-35676460_thyroid
12	lnc-PPP2R3C-1	chr14:35613227-35613686	NONHSAT036366
13	lnc-PPP2R3C-4	chr14:35676137-35676460	l_962_chr14:35668508-35676460_thyroid
14	lnc-PPP2R3C-4	chr14:35714373-35714399	l_962_chr14:35668508-35676460_thyroid
15	lnc-RP11-173D9.3.1-3	chr14:35704702-35704801	l_963_chr14:35700899-35775195_brain
16	lnc-BAZ1A-3	chr14:35585816-35585943	NONHSAT036363
17	lnc-PPP2R3C-4	chr14:35704130-35704256	l_962_chr14:35668508-35676460_thyroid
18	lnc-RP11-173D9.3.1-1	chr14:35568882-35571935	ENSG00000247658
19	lnc-RP11-173D9.3.1-3	chr14:35704074-35704252	l_963_chr14:35700899-35775195_brain
20	lnc-PPP2R3C-4	chr14:35690827-35691028	l_962_chr14:35668508-35676460_thyroid
21	lnc-RP11-173D9.3.1-3	chr14:35700900-35700969	l_963_chr14:35700899-35775195_brain
22	lnc-PPP2R3C-4	chr14:35668509-35676125	l_962_chr14:35668508-35676460_thyroid
23	lnc-RP11-173D9.3.1-1	chr14:35579776-35579932	ENSG00000247658
24	lnc-PPP2R3C-4	chr14:35693328-35695629	l_962_chr14:35668508-35676460_thyroid
25	lnc-RP11-173D9.3.1-1	chr14:35575573-35575690	ENSG00000247658
26	lnc-PPP2R3C-4	chr14:35704820-35705215	l_962_chr14:35668508-35676460_thyroid
27	lnc-PPP2R3C-4	chr14:35704706-35704801	l_962_chr14:35668508-35676460_thyroid

No data

(count:6 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	FAM177A1	hsa-miR-142-3p	chr14:35551080-35551101
2	FAM177A1	hsa-miR-124-3p	chr14:35552531-35552538
3	FAM177A1	hsa-miR-186-5p	chr14:35551034-35551055
4	FAM177A1	hsa-miR-186-5p	chr14:35550483-35550504
5	FAM177A1	hsa-miR-155-5p	chr14:35551927-35551947
6	FAM177A1	hsa-miR-124-3p	chr14:35552521-35552538

Variant related genes	Relation type
ENSG00000241052	TF binding region
ENSG00000259090	TF binding region
FAM177A1	TF binding region
KIAA0391	TF binding region
ENSG00000258790	TF binding region
PPP2R3C	TF binding region
RPL7AP3	TF binding region
ENSG00000241052	CpG island
ENSG00000259090	CpG island
FAM177A1	CpG island
KIAA0391	CpG island
ENSG00000258790	CpG island
PPP2R3C	CpG island
RPL7AP3	CpG island
ENSG00000141376	chromatin interactions
ENSG00000256243	chromatin interactions
ENSG00000240392	chromatin interactions
ENSG00000165752	chromatin interactions
ENSG00000129518	chromatin interactions
ENSG00000258790	chromatin interactions
ENSG00000008130	chromatin interactions
ENSG00000151327	chromatin interactions
ENSG00000265530	chromatin interactions
ENSG00000258704	chromatin interactions
ENSG00000100902	chromatin interactions
ENSG00000092020	chromatin interactions
ENSG00000100883	chromatin interactions
ENSG00000259090	chromatin interactions
ENSG00000196547	chromatin interactions
ENSG00000174851	chromatin interactions
ENSG00000100906	chromatin interactions
ENSG00000100890	chromatin interactions
ENSG00000200169	chromatin interactions
ENSG00000198604	chromatin interactions
ENSG00000094916	chromatin interactions
ENSG00000258738	chromatin interactions
FNDC3A	miRNA target sites
C2CD4A	miRNA target sites
NEFM	miRNA target sites
SAMD4B	miRNA target sites

Extended variants
information (count: 7162 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:7162 , 50 per page) page: 1 2 3 4 5 6 7 ... 144

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7146216	chr14:35537548-35537549	Strong transcription Weak transcription ZNF genes & repeats Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs537517992	chr14:35537553-35537554	Strong transcription Weak transcription ZNF genes & repeats Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs535449921	chr14:35537577-35537578	Strong transcription Weak transcription ZNF genes & repeats Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs181094013	chr14:35537600-35537601	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs559064994	chr14:35537604-35537605	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs118162908	chr14:35537628-35537629	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs73234486	chr14:35537695-35537696	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs544852398	chr14:35537733-35537734	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs112422510	chr14:35537801-35537802	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
10	rs147709487	chr14:35537817-35537818	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
11	rs540873740	chr14:35537834-35537835	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
12	rs559480826	chr14:35537835-35537836	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
13	rs528152909	chr14:35537842-35537843	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
14	rs548310172	chr14:35537915-35537916	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
15	rs561697626	chr14:35537927-35537928	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
16	rs530440310	chr14:35537943-35537944	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
17	rs550839820	chr14:35537979-35537980	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
18	rs55890055	chr14:35537984-35537985	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs539619054	chr14:35537986-35537987	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
20	rs559897942	chr14:35537998-35537999	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
21	rs528737117	chr14:35538005-35538006	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
22	rs535526418	chr14:35538075-35538076	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
23	rs555454185	chr14:35538078-35538079	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
24	rs569218107	chr14:35538079-35538080	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
25	rs537879721	chr14:35538088-35538089	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
26	rs799491	chr14:35538135-35538136	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs180841452	chr14:35538172-35538173	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
28	rs35212208	chr14:35538191-35538192	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
29	rs370170303	chr14:35538194-35538195	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
30	rs574637325	chr14:35538238-35538239	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs142581087	chr14:35538254-35538255	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs566019491	chr14:35538256-35538257	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs574307022	chr14:35538276-35538277	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs187404627	chr14:35538296-35538297	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs115839380	chr14:35538340-35538341	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs147596868	chr14:35538359-35538360	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs372303802	chr14:35538374-35538375	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs543920565	chr14:35538380-35538381	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs190863894	chr14:35538381-35538382	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs533020261	chr14:35538434-35538435	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs546508949	chr14:35538436-35538437	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs138909982	chr14:35538464-35538465	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs543492917	chr14:35538491-35538492	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs566292889	chr14:35538495-35538496	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs529086168	chr14:35538500-35538501	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs77450995	chr14:35538507-35538508	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs61628117	chr14:35538508-35538509	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs562923360	chr14:35538534-35538535	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs549042613	chr14:35538597-35538598	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs569297988	chr14:35538629-35538630	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Esophageal cancer	21851588	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Non-small cell lung cancer	21044232	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Colorectal cancer	16774939	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	17899364	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Renal cell carcinoma	21668985	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Chronic myeloid leukemia	20724749	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	20955586	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Burkitt''s lymphoma	19759907	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Multiple myeloma	17550852	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21045282	CNVD
Cancer	21129771	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Lung cancer	17925434	CNVD
Colorectal cancer	16272173	CNVD
Glioma	24330732	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21858162	CNVD
Lung cancer	21569311	CNVD
Lung cancer	21911935	CNVD
Myelofibrosis	22110671	CNVD
abnormal development	18461090	CNVD
Prostate cancer	21298110	CNVD
Metanephric adenoma	20802469	CNVD
Lung adenocarcinoma	17982442	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Cancer	20164920	CNVD

Chromatin state (count:4365 , 50 per page) page: 1 2 3 4 5 6 7 ... 88

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:35516400-35537600	Weak transcription	Ovary	ovary
2	chr14:35516400-35552600	Weak transcription	Spleen	Spleen
3	chr14:35516800-35537600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr14:35516800-35551200	Weak transcription	Right Ventricle	heart
5	chr14:35516800-35552200	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr14:35517200-35547200	Weak transcription	Brain Anterior Caudate	brain
7	chr14:35517400-35537600	Weak transcription	Colon Smooth Muscle	Colon
8	chr14:35517400-35544000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
9	chr14:35517400-35578800	Weak transcription	Stomach Mucosa	stomach
10	chr14:35517600-35537600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
11	chr14:35517600-35537600	Weak transcription	Pancreatic Islets	Pancreatic Islet
12	chr14:35517600-35545800	Weak transcription	Brain Cingulate Gyrus	brain
13	chr14:35517600-35554400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
14	chr14:35518000-35547400	Weak transcription	GM12878-XiMat	blood
15	chr14:35520200-35550800	Weak transcription	NHLF	lung
16	chr14:35521000-35559400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr14:35521600-35540800	Strong transcription	Primary neutrophils fromperipheralblood	blood
18	chr14:35523400-35537600	Weak transcription	HSMMtube	muscle
19	chr14:35525800-35537800	Weak transcription	Psoas Muscle	Psoas
20	chr14:35526600-35547200	Weak transcription	Brain Angular Gyrus	brain
21	chr14:35526600-35552400	Weak transcription	Brain Substantia Nigra	brain
22	chr14:35528200-35547400	Weak transcription	Fetal Thymus	thymus
23	chr14:35528200-35552200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr14:35528200-35559400	Weak transcription	Colonic Mucosa	Colon
25	chr14:35528600-35552400	Weak transcription	Placenta Amnion	Placenta Amnion
26	chr14:35528600-35552800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
27	chr14:35528800-35563200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
28	chr14:35529000-35552000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
29	chr14:35529400-35555800	Weak transcription	Aorta	Aorta
30	chr14:35529400-35590200	Weak transcription	Esophagus	oesophagus
31	chr14:35530400-35550600	Weak transcription	Rectal Smooth Muscle	rectum
32	chr14:35530600-35537600	Weak transcription	HUES48 Cell Line	embryonic stem cell
33	chr14:35530600-35537600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
34	chr14:35530600-35537600	Weak transcription	Duodenum Mucosa	Duodenum
35	chr14:35530600-35540600	Weak transcription	Muscle Satellite Cultured Cells	--
36	chr14:35530600-35544000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
37	chr14:35530600-35547200	Weak transcription	HMEC	breast
38	chr14:35530600-35548000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
39	chr14:35530600-35550200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
40	chr14:35530600-35552400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
41	chr14:35530600-35563600	Weak transcription	Small Intestine	intestine
42	chr14:35530600-35590000	Weak transcription	Fetal Heart	heart
43	chr14:35530800-35552000	Weak transcription	Hela-S3	cervix
44	chr14:35531400-35537600	Weak transcription	Cortex derived primary cultured neurospheres	brain
45	chr14:35531400-35537600	Weak transcription	Lung	lung
46	chr14:35531400-35537600	Weak transcription	Dnd41	blood
47	chr14:35531400-35537800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
48	chr14:35531400-35547400	Weak transcription	Skeletal Muscle Male	skeletal muscle
49	chr14:35531400-35550800	Weak transcription	HUVEC	blood vessel
50	chr14:35531400-35552600	Weak transcription	Pancreas	Pancrea

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