Variant report
Variant | nsv1040628 |
---|---|
Chromosome Location | chr12:40180398-40244001 |
allele | n/a |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr12:40158200-40199000 | Weak transcription | Left Ventricle | heart |
2 | chr12:40161600-40198800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
3 | chr12:40174400-40186200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
4 | chr12:40176200-40189400 | Weak transcription | Colon Smooth Muscle | Colon |
5 | chr12:40179800-40180600 | Enhancers | Rectal Mucosa Donor 31 | rectum |
6 | chr12:40180200-40180600 | Enhancers | HSMMtube | muscle |
7 | chr12:40180600-40189200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
8 | chr12:40186200-40186800 | Enhancers | Rectal Mucosa Donor 29 | rectum |
9 | chr12:40186400-40186600 | ZNF genes & repeats | Ganglion Eminence derived primary cultured neurospheres | brain |
10 | chr12:40186800-40187400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
11 | chr12:40187400-40187600 | Enhancers | Rectal Mucosa Donor 29 | rectum |
12 | chr12:40188600-40188800 | Enhancers | Rectal Smooth Muscle | rectum |
13 | chr12:40188800-40193400 | Weak transcription | Rectal Smooth Muscle | rectum |
14 | chr12:40189200-40189800 | Enhancers | Rectal Mucosa Donor 31 | rectum |
15 | chr12:40189400-40189600 | Enhancers | Colon Smooth Muscle | Colon |
16 | chr12:40189600-40190000 | Weak transcription | Colon Smooth Muscle | Colon |
17 | chr12:40190000-40190800 | Enhancers | Colon Smooth Muscle | Colon |
18 | chr12:40190800-40197600 | Weak transcription | Colon Smooth Muscle | Colon |
19 | chr12:40191600-40194200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
20 | chr12:40193400-40193600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
21 | chr12:40193400-40193800 | Enhancers | Rectal Smooth Muscle | rectum |
22 | chr12:40193600-40193800 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
23 | chr12:40193600-40193800 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
24 | chr12:40193800-40198400 | Weak transcription | Rectal Smooth Muscle | rectum |
25 | chr12:40193800-40255800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
26 | chr12:40194000-40198400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
27 | chr12:40194600-40232600 | Weak transcription | Right Ventricle | heart |
28 | chr12:40195600-40196000 | Enhancers | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
29 | chr12:40197400-40197600 | Enhancers | Liver | Liver |
30 | chr12:40197600-40198200 | Weak transcription | Liver | Liver |
31 | chr12:40197600-40198800 | Enhancers | Colon Smooth Muscle | Colon |
32 | chr12:40198200-40200600 | Enhancers | Liver | Liver |
33 | chr12:40198400-40199200 | Enhancers | Rectal Smooth Muscle | rectum |
34 | chr12:40198400-40200000 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
35 | chr12:40198600-40199000 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
36 | chr12:40198600-40199200 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
37 | chr12:40198800-40199200 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
38 | chr12:40198800-40199200 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
39 | chr12:40198800-40199200 | Enhancers | Sigmoid Colon | Sigmoid Colon |
40 | chr12:40198800-40200000 | Enhancers | Cortex derived primary cultured neurospheres | brain |
41 | chr12:40199000-40199200 | Enhancers | Left Ventricle | heart |
42 | chr12:40199000-40199800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
43 | chr12:40199200-40199800 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
44 | chr12:40199200-40199800 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
45 | chr12:40199200-40200000 | Active TSS | Pancreatic Islets | Pancreatic Islet |
46 | chr12:40199200-40265400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
47 | chr12:40199400-40199800 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
48 | chr12:40199800-40200000 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
49 | chr12:40200000-40205000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
50 | chr12:40200000-40205800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |