Variant report

Variant nsv1040628
Chromosome Location chr12:40180398-40244001
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:179 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:40158200-40199000 Weak transcription Left Ventricle heart
2 chr12:40161600-40198800 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr12:40174400-40186200 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr12:40176200-40189400 Weak transcription Colon Smooth Muscle Colon
5 chr12:40179800-40180600 Enhancers Rectal Mucosa Donor 31 rectum
6 chr12:40180200-40180600 Enhancers HSMMtube muscle
7 chr12:40180600-40189200 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr12:40186200-40186800 Enhancers Rectal Mucosa Donor 29 rectum
9 chr12:40186400-40186600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
10 chr12:40186800-40187400 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr12:40187400-40187600 Enhancers Rectal Mucosa Donor 29 rectum
12 chr12:40188600-40188800 Enhancers Rectal Smooth Muscle rectum
13 chr12:40188800-40193400 Weak transcription Rectal Smooth Muscle rectum
14 chr12:40189200-40189800 Enhancers Rectal Mucosa Donor 31 rectum
15 chr12:40189400-40189600 Enhancers Colon Smooth Muscle Colon
16 chr12:40189600-40190000 Weak transcription Colon Smooth Muscle Colon
17 chr12:40190000-40190800 Enhancers Colon Smooth Muscle Colon
18 chr12:40190800-40197600 Weak transcription Colon Smooth Muscle Colon
19 chr12:40191600-40194200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr12:40193400-40193600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr12:40193400-40193800 Enhancers Rectal Smooth Muscle rectum
22 chr12:40193600-40193800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
23 chr12:40193600-40193800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
24 chr12:40193800-40198400 Weak transcription Rectal Smooth Muscle rectum
25 chr12:40193800-40255800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr12:40194000-40198400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr12:40194600-40232600 Weak transcription Right Ventricle heart
28 chr12:40195600-40196000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr12:40197400-40197600 Enhancers Liver Liver
30 chr12:40197600-40198200 Weak transcription Liver Liver
31 chr12:40197600-40198800 Enhancers Colon Smooth Muscle Colon
32 chr12:40198200-40200600 Enhancers Liver Liver
33 chr12:40198400-40199200 Enhancers Rectal Smooth Muscle rectum
34 chr12:40198400-40200000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
35 chr12:40198600-40199000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
36 chr12:40198600-40199200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr12:40198800-40199200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
38 chr12:40198800-40199200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
39 chr12:40198800-40199200 Enhancers Sigmoid Colon Sigmoid Colon
40 chr12:40198800-40200000 Enhancers Cortex derived primary cultured neurospheres brain
41 chr12:40199000-40199200 Enhancers Left Ventricle heart
42 chr12:40199000-40199800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr12:40199200-40199800 Enhancers ES-I3 Cell Line embryonic stem cell
44 chr12:40199200-40199800 Enhancers iPS-20b Cell Line embryonic stem cell
45 chr12:40199200-40200000 Active TSS Pancreatic Islets Pancreatic Islet
46 chr12:40199200-40265400 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr12:40199400-40199800 Enhancers iPS-15b Cell Line embryonic stem cell
48 chr12:40199800-40200000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
49 chr12:40200000-40205000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr12:40200000-40205800 Weak transcription Cortex derived primary cultured neurospheres brain

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