Variant report

Variant nsv1048328
Chromosome Location chr11:56471984-56649908
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:262 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:56468200-56473200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr11:56468600-56473200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr11:56468600-56473200 Weak transcription HMEC breast
4 chr11:56468600-56473600 Weak transcription NHEK skin
5 chr11:56468800-56472600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr11:56470200-56473200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr11:56471800-56474200 Flanking Active TSS Dnd41 blood
8 chr11:56472000-56473800 Weak transcription H9 Cell Line embryonic stem cell
9 chr11:56472600-56473600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
10 chr11:56473200-56473800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr11:56473200-56474000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
12 chr11:56473200-56474600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr11:56473200-56474600 Enhancers HMEC breast
14 chr11:56473600-56474400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr11:56473600-56474400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr11:56473600-56474400 Enhancers NHEK skin
17 chr11:56473800-56474200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr11:56473800-56474200 Enhancers H9 Cell Line embryonic stem cell
19 chr11:56474200-56475000 Enhancers Dnd41 blood
20 chr11:56480800-56482600 Enhancers Dnd41 blood
21 chr11:56482000-56482200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr11:56482200-56484000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr11:56482600-56483400 Weak transcription Dnd41 blood
24 chr11:56483400-56484400 Enhancers Rectal Mucosa Donor 31 rectum
25 chr11:56483400-56484400 Enhancers Dnd41 blood
26 chr11:56484000-56484400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr11:56484400-56487200 Weak transcription Dnd41 blood
28 chr11:56485600-56486000 Enhancers Fetal Intestine Small intestine
29 chr11:56487200-56491800 Enhancers Dnd41 blood
30 chr11:56504800-56505200 Enhancers Fetal Brain Male brain
31 chr11:56519000-56519200 ZNF genes & repeats Spleen Spleen
32 chr11:56520000-56520400 Enhancers Dnd41 blood
33 chr11:56520400-56524600 Weak transcription Dnd41 blood
34 chr11:56521600-56521800 Enhancers H1 Cell Line embryonic stem cell
35 chr11:56521800-56522800 Weak transcription H1 Cell Line embryonic stem cell
36 chr11:56521800-56523600 Enhancers HUES48 Cell Line embryonic stem cell
37 chr11:56522000-56523600 Enhancers iPS-18 Cell Line embryonic stem cell
38 chr11:56522400-56522800 Enhancers iPS-20b Cell Line embryonic stem cell
39 chr11:56522400-56523400 Enhancers HUES64 Cell Line embryonic stem cell
40 chr11:56522600-56522800 Enhancers ES-WA7 Cell Line embryonic stem cell
41 chr11:56522600-56523000 Enhancers HUES6 Cell Line embryonic stem cell
42 chr11:56522800-56523000 Enhancers H1 Cell Line embryonic stem cell
43 chr11:56522800-56523200 Active TSS iPS-20b Cell Line embryonic stem cell
44 chr11:56523000-56523600 Weak transcription H1 Cell Line embryonic stem cell
45 chr11:56523600-56523800 Enhancers H1 Cell Line embryonic stem cell
46 chr11:56523800-56525200 Weak transcription H1 Cell Line embryonic stem cell
47 chr11:56524600-56525800 Enhancers Dnd41 blood
48 chr11:56525200-56525400 Enhancers H1 Cell Line embryonic stem cell
49 chr11:56532400-56533000 Enhancers A549 lung
50 chr11:56541800-56542200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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