Variant report

Variant	nsv1048933
Chromosome Location	chr12:39886665-39946270
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:39928840-39929108	HepG2	liver:	n/a	n/a
2	ARID3A	chr12:39928847-39929140	K562	blood:	n/a	n/a
3	ARID3A	chr12:39932499-39932672	K562	blood:	n/a	n/a
4	ARID3A	chr12:39941824-39941979	HepG2	liver:	n/a	n/a
5	ATF1	chr12:39932360-39932733	K562	blood:	n/a	n/a
6	ATF3	chr12:39932340-39932621	K562	blood:	n/a	n/a
7	ATF3	chr12:39897331-39897506	K562	blood:	n/a	n/a
8	ATF3	chr12:39932440-39932668	K562	blood:	n/a	n/a
9	BACH1	chr12:39917491-39917517	H1-hESC	embryonic stem cell:	n/a	n/a
10	BHLHE40	chr12:39932517-39932577	K562	blood:	n/a	n/a
11	CBX3	chr12:39932348-39932695	K562	blood:	n/a	n/a
12	CBX3	chr12:39920612-39920872	K562	blood:	n/a	n/a
13	CBX3	chr12:39897182-39897623	HCT-116	colon:	n/a	n/a
14	CBX3	chr12:39932295-39932782	K562	blood:	n/a	n/a
15	CCNT2	chr12:39893132-39893426	K562	blood:	n/a	n/a
16	CEBPB	chr12:39897157-39897664	A549	lung:	n/a	chr12:39897354-39897365 chr12:39897354-39897367 chr12:39897354-39897365 chr12:39897354-39897367
17	CEBPB	chr12:39897243-39897577	A549	lung:	n/a	chr12:39897354-39897365 chr12:39897354-39897367 chr12:39897354-39897365 chr12:39897354-39897367
18	CEBPB	chr12:39897167-39897594	Hela-S3	cervix:	n/a	chr12:39897354-39897365 chr12:39897354-39897367 chr12:39897354-39897365 chr12:39897354-39897367
19	CEBPB	chr12:39909423-39909497	HepG2	liver:	n/a	n/a
20	CEBPB	chr12:39932354-39932686	K562	blood:	n/a	n/a
21	CEBPB	chr12:39928867-39929138	K562	blood:	n/a	n/a
22	CHD2	chr12:39932453-39932598	K562	blood:	n/a	n/a
23	CREB1	chr12:39932308-39932720	K562	blood:	n/a	n/a
24	CREB1	chr12:39932230-39932766	K562	blood:	n/a	n/a
25	CTCF	chr12:39928880-39929030	HCPEpiC	choroid plexus:	n/a	chr12:39928952-39928973 chr12:39928950-39928968 chr12:39928955-39928963
26	CTCF	chr12:39928904-39929017	GM10266	blood:	n/a	chr12:39928952-39928973 chr12:39928950-39928968 chr12:39928955-39928963
27	CTCF	chr12:39928920-39929070	NHDF-neo	bronchial:	n/a	chr12:39928952-39928973 chr12:39928950-39928968 chr12:39928955-39928963
28	CTCF	chr12:39928880-39929030	HCT-116	colon:	n/a	chr12:39928952-39928973 chr12:39928950-39928968 chr12:39928955-39928963
29	CTCF	chr12:39928880-39929030	GM12871	blood:	n/a	chr12:39928952-39928973 chr12:39928950-39928968 chr12:39928955-39928963
30	CTCF	chr12:39928940-39929090	GM12864	blood:	n/a	chr12:39928952-39928973 chr12:39928950-39928968 chr12:39928955-39928963
31	CTCF	chr12:39942860-39943010	HMEC	breast:	n/a	chr12:39942927-39942948 chr12:39942932-39942950
32	CTCF	chr12:39928840-39928990	HCT-116	colon:	n/a	chr12:39928952-39928973 chr12:39928950-39928968 chr12:39928955-39928963
33	CTCF	chr12:39928880-39929030	RPTEC	kidney:	n/a	chr12:39928952-39928973 chr12:39928950-39928968 chr12:39928955-39928963
34	CTCF	chr12:39928800-39928950	GM12868	blood:	n/a	n/a
35	CTCF	chr12:39928940-39929090	HFF-Myc	foreskin:	n/a	chr12:39928952-39928973 chr12:39928950-39928968 chr12:39928955-39928963
36	CTCF	chr12:39942900-39943050	HMEC	breast:	n/a	chr12:39942927-39942948 chr12:39942932-39942950
37	CTCF	chr12:39897440-39897590	A549	lung:	n/a	n/a
38	CTCF	chr12:39928865-39929015	HepG2	liver:	n/a	chr12:39928952-39928973 chr12:39928950-39928968 chr12:39928955-39928963
39	CTCF	chr12:39897360-39897510	HUVEC	blood vessel:	n/a	n/a
40	CTCF	chr12:39897360-39897510	BE2_C	brain:	n/a	n/a
41	CTCF	chr12:39928860-39929010	AoAF	blood vessel:	n/a	chr12:39928952-39928973 chr12:39928950-39928968 chr12:39928955-39928963
42	CTCF	chr12:39897340-39897490	MCF-7	breast:	n/a	n/a
43	CTCF	chr12:39897500-39897650	HRPEpiC	eye:	n/a	n/a
44	CTCF	chr12:39928860-39929010	GM12872	blood:	n/a	chr12:39928952-39928973 chr12:39928950-39928968 chr12:39928955-39928963
45	CTCF	chr12:39928902-39929037	LNCaP	prostate:	n/a	chr12:39928952-39928973 chr12:39928950-39928968 chr12:39928955-39928963
46	CTCF	chr12:39928840-39928990	RPTEC	kidney:	n/a	chr12:39928952-39928973 chr12:39928950-39928968 chr12:39928955-39928963
47	CTCF	chr12:39928860-39929010	AG10803	skin:	n/a	chr12:39928952-39928973 chr12:39928950-39928968 chr12:39928955-39928963
48	CTCF	chr12:39928920-39929070	NHLF	lung:	n/a	chr12:39928952-39928973 chr12:39928950-39928968 chr12:39928955-39928963
49	CTCF	chr12:39904020-39904170	HBMEC	blood vessel:	n/a	n/a
50	CTCF	chr12:39897360-39897510	MCF-7	breast:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:39932673-39932723	SAEC	small airway:	n/a
2	chr12:39932673-39932723	MCF-7	breast:	n/a
3	chr12:39932673-39932723	AG04449	skin:	fetal
4	chr12:39932673-39932723	BJ	skin:	n/a
5	chr12:39932673-39932723	SK-N-SH	brain:	n/a
6	chr12:39932673-39932723	GM06990	blood:	n/a
7	chr12:39932673-39932723	HRCEpiC	kidney:	n/a
8	chr12:39932673-39932723	HCM	heart:	n/a
9	chr12:39932673-39932723	HL-60	blood:	n/a
10	chr12:39932673-39932723	NT2-D1	testis:	n/a
11	chr12:39932673-39932723	Jurkat	blood:	n/a
12	chr12:39932673-39932723	HPAEpiC	pulmonary alveolar:	n/a
13	chr12:39932673-39932723	AoSMC	blood vessel:	n/a
14	chr12:39932673-39932723	PFSK-1	brain:	n/a
15	chr12:39932673-39932723	K562	blood:	n/a
16	chr12:39932673-39932723	HRPEpiC	eye:	n/a
17	chr12:39932673-39932723	SK-N-MC	brain:	n/a
18	chr12:39932673-39932723	SK-N-SH_RA	brain:	n/a
19	chr12:39932673-39932723	HUVEC	blood vessel:	n/a
20	chr12:39932673-39932723	HCPEpiC	choroid plexus:	n/a
21	chr12:39932673-39932723	U87	brain:	n/a
22	chr12:39932673-39932723	HRE	kidney:	n/a
23	chr12:39932673-39932723	BE2_C	brain:	n/a
24	chr12:39932673-39932723	T-47D	breast:	n/a
25	chr12:39932673-39932723	NB4	blood:	n/a
26	chr12:39932673-39932723	PANC-1	pancreas:	n/a
27	chr12:39932673-39932723	NHBE	bronchial:	n/a
28	chr12:39932673-39932723	H1-hESC	embryonic stem cell:	embryo
29	chr12:39932673-39932723	HAEpiC	amniotic membrane:	n/a
30	chr12:39932673-39932723	ProgFib	skin:	n/a
31	chr12:39932673-39932723	NHDF-neo	bronchial:	n/a
32	chr12:39932673-39932723	LNCaP	prostate:	n/a
33	chr12:39932673-39932723	Hela-S3	cervix:	n/a
34	chr12:39932673-39932723	NH-A	brain:	n/a
35	chr12:39932673-39932723	ovcar-3	ovarian:	n/a
36	chr12:39932673-39932723	ECC-1	luminal epithelium:	n/a
37	chr12:39932673-39932723	AG04450	lung:	fetal
38	chr12:39932673-39932723	RPTEC	kidney:	n/a
39	chr12:39932673-39932723	Hepatocyte	liver:	n/a
40	chr12:39932673-39932723	HEK293	kidney:	embryo
41	chr12:39932673-39932723	A549	lung:	n/a
42	chr12:39932673-39932723	SKMC	muscle:	n/a
43	chr12:39932673-39932723	CMK	blood:	n/a
44	chr12:39932673-39932723	IMR90	lung:	fetal
45	chr12:39932673-39932723	AG10803	skin:	n/a
46	chr12:39932673-39932723	GM12892	blood:	n/a
47	chr12:39932673-39932723	HIPEpiC	eye:	n/a
48	chr12:39932673-39932723	HNPCEpiC	eye:	n/a
49	chr12:39932673-39932723	GM12878	blood:	n/a
50	chr12:39932673-39932723	HCF	heart:	n/a

No.	Distal block	Cell Line	Cell type
1	chr12:39926553..39928856-chr12:39931123..39933872,2	K562	blood:
2	chr12:39935467..39937094-chr12:40451858..40454102,2	K562	blood:
3	chr12:39836470..39838324-chr12:39927543..39930505,2	MCF-7	breast:
4	chr12:39923283..39924803-chr12:39931184..39934031,2	K562	blood:
5	chr12:39836009..39838675-chr12:39889597..39892071,2	MCF-7	breast:
6	chr12:39835315..39837704-chr12:39933049..39935834,3	K562	blood:
7	chr12:39933714..39935696-chr12:39937326..39938975,2	K562	blood:
8	chr12:39891710..39895050-chr12:39895877..39898894,4	K562	blood:
9	chr12:39891710..39895050-chr12:39895877..39898894,4	K562	blood:
10	chr12:39887806..39889912-chr12:39892327..39894419,2	K562	blood:
11	chr12:39834094..39836682-chr12:39930769..39933635,3	K562	blood:
12	chr12:39933714..39935696-chr12:39937326..39938975,2	K562	blood:
13	chr12:39759019..39759794-chr12:39928934..39929706,2	MCF-7	breast:
14	chr12:39932301..39934911-chr12:39941058..39943414,2	K562	blood:
15	chr12:39887806..39889912-chr12:39892327..39894419,2	K562	blood:
16	chr12:39834926..39838075-chr12:39898307..39900451,3	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C12orf40-1	chr12:39940682-39942476	NONHSAT027707
2	lnc-C12orf40-1	chr12:39942705-39943943	NONHSAT027707
3	lnc-ABCD2-2	chr12:39933383-39933653	NONHSAT027706

Variant related genes	Relation type
ENSG00000270273	TF binding region
ENSG00000270273	CpG island
ENSG00000252974	chromatin interactions
ENSG00000270273	chromatin interactions
ENSG00000139116	chromatin interactions

Extended variants
information (count: 1623 )
Associated
traits (count: 57 )

Variant overlapped rSNPs/rCNVs (count:1623 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs550152161	chr12:39888204-39888205	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs568175218	chr12:39888217-39888218	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs111806122	chr12:39888374-39888375	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs547580036	chr12:39888379-39888380	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs75410852	chr12:39888385-39888386	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs540039808	chr12:39888398-39888399	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs558140600	chr12:39888422-39888423	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs570331360	chr12:39888516-39888517	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs537406197	chr12:39888541-39888542	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs556236978	chr12:39888584-39888585	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs574583318	chr12:39888592-39888593	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs541976610	chr12:39888715-39888716	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs553991540	chr12:39888730-39888731	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs572110367	chr12:39888759-39888760	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs545997919	chr12:39888784-39888785	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs74803755	chr12:39888859-39888860	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs56125314	chr12:39888918-39888919	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs543441964	chr12:39888991-39888992	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs561792242	chr12:39889042-39889043	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs541268165	chr12:39889097-39889098	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs186151164	chr12:39889118-39889119	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs547452306	chr12:39889210-39889211	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs117789379	chr12:39889249-39889250	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs148537616	chr12:39889256-39889257	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs551963357	chr12:39889257-39889258	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs191516432	chr12:39889290-39889291	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs537798589	chr12:39889304-39889305	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs76914660	chr12:39889362-39889363	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs568095143	chr12:39889397-39889398	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs4573723	chr12:39889400-39889401	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs567910343	chr12:39889624-39889625	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs140710937	chr12:39889646-39889647	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs529223536	chr12:39889673-39889674	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs375160346	chr12:39889699-39889700	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs11838306	chr12:39889758-39889759	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs144558494	chr12:39889783-39889784	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs533511660	chr12:39889797-39889798	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs551682574	chr12:39889798-39889799	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs563937083	chr12:39889856-39889857	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs531097978	chr12:39889857-39889858	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs147852544	chr12:39889868-39889869	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs567979440	chr12:39889890-39889891	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs141388997	chr12:39889896-39889897	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs12826760	chr12:39889903-39889904	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs547425105	chr12:39889964-39889965	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs565629223	chr12:39890014-39890015	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs369601881	chr12:39890020-39890021	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs557645415	chr12:39890056-39890057	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs200847394	chr12:39890153-39890154	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs538578573	chr12:39890168-39890169	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:57)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Seminomas	18059402	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ewing''s sarcoma	21437220	CNVD
Testicular germ cell tumor	18059402	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Neurodevelopmental disorder	22521361	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	21949216	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21637783	CNVD
Glioblastoma multiforme	21080181	CNVD
Renal cell carcinoma	19461508	CNVD
Burkitt''s lymphoma	18698080	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	17603634	CNVD
Cancer	21183584	CNVD
Hirschsprung''s Disease	21712996	CNVD
Lissencephaly	21572526	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	21251322	CNVD
small cell lung cancer	20016488	CNVD
Autism	20858243	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	19602461	CNVD
Breast cancer	17899364	CNVD
Cancer	20164920	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:113 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:39888200-39889400	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr12:39892800-39893400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr12:39892800-39893400	Enhancers	HMEC	breast
4	chr12:39892800-39893600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr12:39892800-39893600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr12:39892800-39893600	Enhancers	K562	blood
7	chr12:39892800-39893600	Enhancers	NHEK	skin
8	chr12:39893400-39896000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr12:39893400-39896000	Weak transcription	HMEC	breast
10	chr12:39893400-39896600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr12:39893600-39895800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr12:39893600-39895800	Weak transcription	NHEK	skin
13	chr12:39894000-39894200	Enhancers	iPS-18 Cell Line	embryonic stem cell
14	chr12:39894400-39894800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr12:39894600-39894800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
16	chr12:39894800-39895000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr12:39894800-39896000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr12:39894800-39896000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
19	chr12:39895000-39896000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr12:39895200-39897600	Weak transcription	Adipose Nuclei	Adipose
21	chr12:39895800-39896800	Enhancers	iPS-15b Cell Line	embryonic stem cell
22	chr12:39895800-39897200	Enhancers	HUES6 Cell Line	embryonic stem cell
23	chr12:39895800-39897200	Enhancers	iPS-20b Cell Line	embryonic stem cell
24	chr12:39895800-39897200	Enhancers	Cortex derived primary cultured neurospheres	brain
25	chr12:39895800-39897800	Enhancers	NHEK	skin
26	chr12:39895800-39898200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr12:39895800-39899400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr12:39896000-39896600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr12:39896000-39896800	Enhancers	H9 Cell Line	embryonic stem cell
30	chr12:39896000-39897000	Enhancers	ES-I3 Cell Line	embryonic stem cell
31	chr12:39896000-39897000	Enhancers	iPS-18 Cell Line	embryonic stem cell
32	chr12:39896000-39897200	Enhancers	HUES48 Cell Line	embryonic stem cell
33	chr12:39896000-39897200	Enhancers	HUES64 Cell Line	embryonic stem cell
34	chr12:39896000-39897200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
35	chr12:39896000-39897400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
36	chr12:39896000-39897400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
37	chr12:39896000-39897600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
38	chr12:39896000-39897600	Enhancers	HMEC	breast
39	chr12:39896000-39897800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
40	chr12:39896400-39896600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr12:39896400-39896600	Weak transcription	Aorta	Aorta
42	chr12:39896400-39898000	Enhancers	Muscle Satellite Cultured Cells	--
43	chr12:39896600-39896800	Enhancers	Aorta	Aorta
44	chr12:39896600-39897400	Enhancers	Hela-S3	cervix
45	chr12:39896600-39897600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr12:39896800-39897200	Enhancers	Osteobl	bone
47	chr12:39896800-39897800	Enhancers	HUVEC	blood vessel
48	chr12:39897000-39897600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
49	chr12:39897000-39898800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
50	chr12:39897200-39898400	Weak transcription	Cortex derived primary cultured neurospheres	brain

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