Variant report
Variant | nsv1053949 |
---|---|
Chromosome Location | chr11:54773881-55363328 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1981)
- CpG islands (count:1404)
- Chromatin interactive region (count:10)
- LncRNA region (count:24)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr11:54944326-54944655 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr11:55026236-55026614 | HepG2 | liver: | n/a | n/a |
3 | ATF1 | chr11:54944286-54944657 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr11:54997083-54997606 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr11:54961546-54961918 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr11:54912080-54912450 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr11:55019501-55019863 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr11:55026235-55026613 | K562 | blood: | n/a | n/a |
9 | ATF1 | chr11:55025562-55025910 | K562 | blood: | n/a | n/a |
10 | BACH1 | chr11:55023515-55023741 | K562 | blood: | n/a | n/a |
11 | BACH1 | chr11:54997720-54998094 | K562 | blood: | n/a | n/a |
12 | BACH1 | chr11:54965393-54965420 | K562 | blood: | n/a | n/a |
13 | BACH1 | chr11:54931923-54932027 | H1-hESC | embryonic stem cell: | n/a | n/a |
14 | BATF | chr11:55000059-55000268 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr11:55017098-55017251 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr11:54994433-54994731 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr11:54941694-54941923 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr11:55027264-55027610 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr11:55016992-55017300 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr11:54990182-54990428 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr11:55025599-55025897 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr11:54833576-54833729 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr11:55026006-55026557 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr11:55016579-55016914 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr11:54995261-54995543 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr11:54995652-54995903 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr11:55015341-55015571 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr11:55015283-55015573 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr11:54975053-54975273 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr11:55056701-55057020 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr11:54833572-54833727 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr11:55050184-55050482 | GM12878 | blood: | n/a | chr11:55050282-55050292 |
33 | BATF | chr11:55026320-55026550 | GM12878 | blood: | n/a | n/a |
34 | BATF | chr11:55000026-55000210 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr11:54993469-54993708 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr11:55024818-55025202 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr11:55050155-55050460 | GM12878 | blood: | n/a | chr11:55050282-55050292 |
38 | BATF | chr11:54923047-54923213 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr11:55024927-55025127 | GM12878 | blood: | n/a | n/a |
40 | BATF | chr11:55014461-55014721 | GM12878 | blood: | n/a | n/a |
41 | BATF | chr11:55027309-55027604 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr11:55008045-55008551 | GM12878 | blood: | n/a | n/a |
43 | BATF | chr11:54993502-54993709 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr11:54995653-54995836 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr11:55022914-55023156 | GM12878 | blood: | n/a | n/a |
46 | BCL11A | chr11:55017059-55017314 | GM12878 | blood: | n/a | n/a |
47 | BCL11A | chr11:55014434-55014749 | GM12878 | blood: | n/a | n/a |
48 | BCL11A | chr11:54997331-54997474 | GM12878 | blood: | n/a | n/a |
49 | BCL11A | chr11:55015258-55015698 | GM12878 | blood: | n/a | n/a |
50 | BCL11A | chr11:54995255-54995565 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:55110562-55110612 | SK-N-MC | brain: | n/a |
2 | chr11:55110562-55110612 | SK-N-MC | brain: | n/a |
3 | chr11:55066025-55066075 | LNCaP | prostate: | n/a |
4 | chr11:55029786-55029836 | AG04449 | skin: | fetal |
5 | chr11:55135331-55135381 | SK-N-MC | brain: | n/a |
6 | chr11:55321480-55321530 | GM12878 | blood: | n/a |
7 | chr11:55044145-55044195 | A549 | lung: | n/a |
8 | chr11:55134268-55134318 | HNPCEpiC | eye: | n/a |
9 | chr11:55029786-55029836 | MCF-7 | breast: | n/a |
10 | chr11:55227646-55227696 | GM06990 | blood: | n/a |
11 | chr11:55110233-55110283 | HCF | heart: | n/a |
12 | chr11:55135337-55135387 | NB4 | blood: | n/a |
13 | chr11:55322753-55322803 | MCF-7 | breast: | n/a |
14 | chr11:55135222-55135272 | HEEpiC | esophagus: | n/a |
15 | chr11:55135337-55135387 | HIPEpiC | eye: | n/a |
16 | chr11:55135222-55135272 | HCPEpiC | choroid plexus: | n/a |
17 | chr11:55227718-55227768 | PFSK-1 | brain: | n/a |
18 | chr11:55044145-55044195 | Hepatocyte | liver: | n/a |
19 | chr11:55044082-55044132 | HCPEpiC | choroid plexus: | n/a |
20 | chr11:55044082-55044132 | NH-A | brain: | n/a |
21 | chr11:55044082-55044132 | MCF-7 | breast: | n/a |
22 | chr11:55134268-55134318 | HCF | heart: | n/a |
23 | chr11:55134268-55134318 | BE2_C | brain: | n/a |
24 | chr11:55110233-55110283 | AoSMC | blood vessel: | n/a |
25 | chr11:55029786-55029836 | HCPEpiC | choroid plexus: | n/a |
26 | chr11:55135656-55135706 | HEK293 | kidney: | embryo |
27 | chr11:55066025-55066075 | HNPCEpiC | eye: | n/a |
28 | chr11:55044145-55044195 | PFSK-1 | brain: | n/a |
29 | chr11:55110562-55110612 | AG04450 | lung: | fetal |
30 | chr11:55066025-55066075 | HRPEpiC | eye: | n/a |
31 | chr11:55322753-55322803 | ovcar-3 | ovarian: | n/a |
32 | chr11:55227718-55227768 | NT2-D1 | testis: | n/a |
33 | chr11:55135222-55135272 | Hela-S3 | cervix: | n/a |
34 | chr11:55029786-55029836 | HNPCEpiC | eye: | n/a |
35 | chr11:55227646-55227696 | HPAEpiC | pulmonary alveolar: | n/a |
36 | chr11:55041873-55041923 | HepG2 | liver: | n/a |
37 | chr11:55044082-55044132 | HCT-116 | colon: | n/a |
38 | chr11:55135331-55135381 | LNCaP | prostate: | n/a |
39 | chr11:55044220-55044270 | SK-N-SH_RA | brain: | n/a |
40 | chr11:55135046-55135096 | HL-60 | blood: | n/a |
41 | chr11:55322753-55322803 | HIPEpiC | eye: | n/a |
42 | chr11:55338135-55338185 | HRPEpiC | eye: | n/a |
43 | chr11:55066025-55066075 | SKMC | muscle: | n/a |
44 | chr11:55109885-55109935 | AG04450 | lung: | fetal |
45 | chr11:55227718-55227768 | HCF | heart: | n/a |
46 | chr11:55322753-55322803 | NHDF-neo | bronchial: | n/a |
47 | chr11:55044145-55044195 | MCF10A-Er-Src | breast: | n/a |
48 | chr11:55029786-55029836 | SAEC | small airway: | n/a |
49 | chr11:55110562-55110612 | AG09309 | skin: | n/a |
50 | chr11:55135337-55135387 | HepG2 | liver: | n/a |
(count:10 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:55087931..55090092-chr11:55095019..55097450,2 | K562 | blood: | |
2 | chr1:121484468..121485418-chr11:54954643..54955164,2 | MCF-7 | breast: | |
3 | chr11:54830914..54832417-chr2:88315417..88317014,2 | MCF-7 | breast: | |
4 | chr11:54832434..54832937-chr2:88315431..88316142,3 | HCT-116 | colon: | |
5 | chr11:54832435..54833937-chr2:88314124..88316426,4 | K562 | blood: | |
6 | chr11:55087931..55090092-chr11:55095019..55097450,2 | K562 | blood: | |
7 | chr11:54832434..54833936-chr2:88314570..88316990,4 | MCF-7 | breast: | |
8 | chr11:54831916..54832937-chr2:88315370..88316082,4 | MCF-7 | breast: | |
9 | chr11:54832434..54832936-chr2:88315651..88316162,2 | Hela-S3 | cervix: | |
10 | chr11:54831915..54832416-chr2:88315509..88316126,2 | Hela-S3 | cervix: |
(count:24 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-OR4C11-3 | chr11:55064955-55065051 | NR_038174 |
2 | lnc-OR4C11-2 | chr11:55071537-55071634 | NONHSAT021358 |
3 | lnc-OR4C11-4 | chr11:55052134-55052227 | NONHSAT021356 |
4 | lnc-OR4C11-4 | chr11:55047367-55047617 | NONHSAT021353 |
5 | lnc-OR4C11-4 | chr11:55052911-55052999 | NONHSAT021356 |
6 | lnc-OR4C11-3 | chr11:55061179-55061232 | NR_038174 |
7 | lnc-TRIM48-1 | chr11:55047425-55047765 | NONHSAT021354 |
8 | lnc-OR4A16-3 | chr11:55034884-55035112 | NONHSAT021352 |
9 | lnc-OR4C11-4 | chr11:55052545-55052560 | NONHSAT021356 |
10 | lnc-OR4C11-4 | chr11:55052405-55052415 | NONHSAT021356 |
11 | lnc-OR4C11-4 | chr11:55046923-55047254 | NONHSAT021353 |
12 | lnc-OR4C11-3 | chr11:55062198-55062220 | NONHSAT021357 |
13 | lnc-OR4C11-3 | chr11:55062198-55062220 | NR_038174 |
14 | lnc-OR4C11-4 | chr11:55050561-55050681 | NONHSAT021353 |
15 | lnc-OR4C11-3 | chr11:55062708-55063166 | NR_038174 |
16 | lnc-OR4C11-3 | chr11:55065334-55065439 | NONHSAT021357 |
17 | lnc-OR4C11-2 | chr11:55069766-55070437 | NONHSAT021358 |
18 | lnc-OR4C11-3 | chr11:55064955-55065048 | NONHSAT021357 |
19 | lnc-OR4C11-3 | chr11:55061180-55061232 | NONHSAT021357 |
20 | lnc-OR4C11-3 | chr11:55065335-55065708 | NR_038174 |
21 | lnc-OR4C11-2 | chr11:55072505-55072536 | NONHSAT021358 |
22 | lnc-TRIM48-2 | chr11:55049978-55050453 | NONHSAT021355 |
23 | lnc-OR4C11-3 | chr11:55062708-55063166 | NONHSAT021357 |
24 | lnc-OR4C11-4 | chr11:55052131-55052225 | NONHSAT021353 |
No data |
No data |
Variant related genes | Relation type |
---|---|
OR4A11P | TF binding region |
OR4A13P | TF binding region |
OR4A9P | TF binding region |
OR4X7P | TF binding region |
ENSG00000255493 | TF binding region |
ENSG00000254696 | TF binding region |
OR4C16 | TF binding region |
OR4A21P | TF binding region |
TRIM48 | TF binding region |
OR4A50P | TF binding region |
OR4A14P | TF binding region |
OR4C1P | TF binding region |
ENSG00000255543 | TF binding region |
TRIM51HP | TF binding region |
ENSG00000254828 | TF binding region |
OR4C15 | TF binding region |
OR4A12P | TF binding region |
OR4A10P | TF binding region |
OR4A17P | TF binding region |
OR4A15 | TF binding region |
OR4A16 | TF binding region |
ENSG00000255283 | TF binding region |
OR4C14P | TF binding region |
ENSG00000255110 | TF binding region |
OR4A11P | CpG island |
OR4A13P | CpG island |
OR4A9P | CpG island |
OR4X7P | CpG island |
ENSG00000255493 | CpG island |
ENSG00000254696 | CpG island |
OR4C16 | CpG island |
OR4A21P | CpG island |
TRIM48 | CpG island |
OR4A50P | CpG island |
OR4A14P | CpG island |
OR4C1P | CpG island |
ENSG00000255543 | CpG island |
TRIM51HP | CpG island |
ENSG00000254828 | CpG island |
OR4C15 | CpG island |
OR4A12P | CpG island |
OR4A10P | CpG island |
OR4A17P | CpG island |
OR4A15 | CpG island |
OR4A16 | CpG island |
ENSG00000255283 | CpG island |
OR4C14P | CpG island |
ENSG00000255110 | CpG island |
ENSG00000222724 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs537286647 | chr11:54794202-54794203 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
2 | rs113566988 | chr11:54794218-54794219 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
3 | rs558783786 | chr11:54794223-54794224 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
4 | rs577242685 | chr11:54794228-54794229 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
5 | rs34944111 | chr11:54794237-54794238 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
6 | rs563074330 | chr11:54794251-54794252 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
7 | rs541817672 | chr11:54794274-54794275 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
8 | rs538561465 | chr11:54794281-54794282 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
9 | rs191371596 | chr11:54794298-54794299 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
10 | rs548174998 | chr11:54794302-54794303 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
11 | rs568072624 | chr11:54794314-54794315 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
12 | rs146755477 | chr11:54794329-54794330 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
13 | rs113578825 | chr11:54794337-54794338 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
14 | rs182176624 | chr11:54794340-54794341 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
15 | rs185113136 | chr11:54794349-54794350 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
16 | rs190709410 | chr11:54794350-54794351 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
17 | rs531864467 | chr11:54794354-54794355 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
18 | rs115645803 | chr11:54794362-54794363 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
19 | rs529704597 | chr11:54794370-54794371 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
20 | rs183354259 | chr11:54794375-54794376 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
21 | rs547869638 | chr11:54794381-54794382 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
22 | rs569817158 | chr11:54794383-54794384 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
23 | rs530602131 | chr11:54794439-54794440 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
24 | rs552264887 | chr11:54794444-54794445 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
25 | rs570678286 | chr11:54794456-54794457 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
26 | rs538838636 | chr11:54794475-54794476 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
27 | rs115115152 | chr11:54794484-54794485 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
28 | rs117250943 | chr11:54794493-54794494 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
29 | rs369148422 | chr11:54794497-54794498 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
30 | rs188235465 | chr11:54794498-54794499 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
31 | rs556913549 | chr11:54794511-54794512 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
32 | rs575368199 | chr11:54794557-54794558 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
33 | rs545908114 | chr11:54794558-54794559 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
34 | rs533827499 | chr11:54794563-54794564 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
35 | rs557802684 | chr11:54794591-54794592 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
36 | rs193074341 | chr11:54794592-54794593 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
37 | rs183541167 | chr11:54794598-54794599 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
38 | rs557550234 | chr11:54794602-54794603 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
39 | rs562446601 | chr11:54794612-54794613 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
40 | rs529560566 | chr11:54794647-54794648 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
41 | rs188239340 | chr11:54794682-54794683 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
42 | rs373759249 | chr11:54794708-54794709 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
43 | rs563286326 | chr11:54794720-54794721 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
44 | rs1608400 | chr11:54794727-54794728 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
45 | rs191902307 | chr11:54794738-54794739 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
46 | rs539656218 | chr11:54794752-54794753 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
47 | rs528327149 | chr11:54794755-54794756 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
48 | rs546473254 | chr11:54794779-54794780 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
49 | rs114611524 | chr11:54794824-54794825 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
50 | rs183620361 | chr11:54794826-54794827 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Wilms tumour | 21544195 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Gastric cancer | 17908304 | CNVD |
Multiple myeloma | 20724749 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Autism | 22495311 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Non-small cell lung cancer | 21385341 | CNVD |
Intellectual disability | 22102821 | CNVD |
Renal cell carcinoma | 18194544 | CNVD |
Lung cancer | 18438408 | CNVD |
Glioblastoma multiforme | 21138945 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 21990379 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 17142309 | CNVD |
Cancer | 20164919 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Cancer | 21637783 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Chronic lymphocytic leukemia | 21795749 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Neuroblastoma | 21484798 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 20837533 | CNVD |
Breast cancer | 21264507 | CNVD |
Cervical cancer | 21063398 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Liposarcoma | 21253554 | CNVD |
Neuroblastoma | 18923524 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Neuroblastoma | 18664255 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Multiple myeloma | 17077331 | CNVD |
Neuroblastoma | 17533364 | CNVD |
Breast cancer | 21364760 | CNVD |
Alcoholism | 21790672 | CNVD |
Schizophrenia | 20967226 | CNVD |
Schizophrenia | 23813976 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Incontinentia Pigmenti | 22033527 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Medulloblastoma | 21163964 | CNVD |
Breast cancer | 20369283 | CNVD |
Bipolar disorder | 19214233 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Obesity | 21131291 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr11:54794200-54795800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
2 | chr11:54794200-54802000 | ZNF genes & repeats | Liver | Liver |
3 | chr11:54797000-54802000 | ZNF genes & repeats | Adipose Nuclei | Adipose |
4 | chr11:54797200-54798400 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
5 | chr11:54799600-54799800 | ZNF genes & repeats | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
6 | chr11:54800600-54811200 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
7 | chr11:54803000-54805600 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
8 | chr11:54805200-54809800 | ZNF genes & repeats | Liver | Liver |
9 | chr11:54811400-54812000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
10 | chr11:54812000-54814400 | ZNF genes & repeats | Adipose Nuclei | Adipose |
11 | chr11:54812000-54825400 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
12 | chr11:54812200-54825000 | ZNF genes & repeats | Liver | Liver |
13 | chr11:54814000-54814400 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
14 | chr11:54814000-54816200 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
15 | chr11:54814400-54815600 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
16 | chr11:54817000-54817400 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
17 | chr11:54818400-54821200 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
18 | chr11:54819400-54820000 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
19 | chr11:54819400-54820000 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
20 | chr11:54820600-54822400 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
21 | chr11:54821000-54823800 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
22 | chr11:54821200-54823200 | ZNF genes & repeats | Adipose Nuclei | Adipose |
23 | chr11:54821400-54822400 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
24 | chr11:54827600-54832400 | ZNF genes & repeats | Adipose Nuclei | Adipose |
25 | chr11:54828400-54833800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
26 | chr11:54829000-54830400 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
27 | chr11:54831000-54841800 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
28 | chr11:54832200-54832600 | Active TSS | Brain Substantia Nigra | brain |
29 | chr11:54832600-54833400 | Weak transcription | Brain Substantia Nigra | brain |
30 | chr11:54833000-54834200 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
31 | chr11:54833400-54833800 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
32 | chr11:54833400-54833800 | ZNF genes & repeats | Brain Substantia Nigra | brain |
33 | chr11:54833400-54833800 | ZNF genes & repeats | HUVEC | blood vessel |
34 | chr11:54833400-54833800 | ZNF genes & repeats | NH-A | brain |
35 | chr11:54833400-54833800 | ZNF genes & repeats | Osteobl | bone |
36 | chr11:54833600-54833800 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
37 | chr11:54833600-54834000 | ZNF genes & repeats | H9 Cell Line | embryonic stem cell |
38 | chr11:54835000-54835400 | ZNF genes & repeats | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
39 | chr11:54836200-54837600 | ZNF genes & repeats | Liver | Liver |
40 | chr11:54836600-54837200 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
41 | chr11:54838800-54839200 | Active TSS | Aorta | Aorta |
42 | chr11:54839000-54844200 | ZNF genes & repeats | Liver | Liver |
43 | chr11:54839600-54843400 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
44 | chr11:54840000-54843600 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
45 | chr11:54840200-54842400 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
46 | chr11:54841400-54844200 | ZNF genes & repeats | Adipose Nuclei | Adipose |
47 | chr11:54844400-54847800 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
48 | chr11:54844800-54851800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
49 | chr11:54846600-54848200 | ZNF genes & repeats | Adipose Nuclei | Adipose |
50 | chr11:54859000-54860000 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |