Variant report
Variant | nsv1055951 |
---|---|
Chromosome Location | chr22:23273137-23337914 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:2052)
- CpG islands (count:0)
- Chromatin interactive region (count:190)
- LncRNA region (count:3)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr22:23304727-23304753 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr22:23301392-23301736 | HepG2 | liver: | n/a | n/a |
3 | ARID3A | chr22:23301323-23301822 | K562 | blood: | n/a | n/a |
4 | ARID3A | chr22:23302506-23302886 | HepG2 | liver: | n/a | n/a |
5 | ARID3A | chr22:23284829-23285332 | K562 | blood: | n/a | n/a |
6 | ARID3A | chr22:23282059-23282441 | HepG2 | liver: | n/a | n/a |
7 | ARID3A | chr22:23325197-23325207 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr22:23301185-23301842 | K562 | blood: | n/a | n/a |
9 | ATF1 | chr22:23318597-23318797 | K562 | blood: | n/a | n/a |
10 | ATF1 | chr22:23327840-23327943 | K562 | blood: | n/a | n/a |
11 | ATF1 | chr22:23315396-23315720 | K562 | blood: | n/a | n/a |
12 | ATF1 | chr22:23288053-23288301 | K562 | blood: | n/a | n/a |
13 | ATF1 | chr22:23306730-23306734 | K562 | blood: | n/a | n/a |
14 | ATF1 | chr22:23317348-23317584 | K562 | blood: | n/a | n/a |
15 | ATF1 | chr22:23305088-23305147 | K562 | blood: | n/a | n/a |
16 | ATF1 | chr22:23306343-23306353 | K562 | blood: | n/a | n/a |
17 | ATF1 | chr22:23332623-23332803 | K562 | blood: | n/a | n/a |
18 | ATF1 | chr22:23302425-23302483 | K562 | blood: | n/a | n/a |
19 | ATF1 | chr22:23289828-23289954 | K562 | blood: | n/a | n/a |
20 | ATF1 | chr22:23307428-23307545 | K562 | blood: | n/a | n/a |
21 | ATF1 | chr22:23309047-23309052 | K562 | blood: | n/a | n/a |
22 | ATF1 | chr22:23279242-23279779 | K562 | blood: | n/a | n/a |
23 | ATF1 | chr22:23294422-23294718 | K562 | blood: | n/a | n/a |
24 | ATF1 | chr22:23322141-23322315 | K562 | blood: | n/a | n/a |
25 | ATF1 | chr22:23325970-23326396 | K562 | blood: | n/a | n/a |
26 | ATF2 | chr22:23284669-23285361 | GM12878 | blood: | n/a | n/a |
27 | ATF2 | chr22:23273248-23273796 | GM12878 | blood: | n/a | n/a |
28 | ATF2 | chr22:23277487-23278267 | GM12878 | blood: | n/a | n/a |
29 | ATF2 | chr22:23284776-23285371 | GM12878 | blood: | n/a | n/a |
30 | ATF2 | chr22:23273983-23274459 | GM12878 | blood: | n/a | n/a |
31 | ATF2 | chr22:23277251-23278348 | GM12878 | blood: | n/a | n/a |
32 | ATF2 | chr22:23273903-23274587 | GM12878 | blood: | n/a | n/a |
33 | ATF3 | chr22:23315439-23315825 | K562 | blood: | n/a | n/a |
34 | ATF3 | chr22:23301353-23301754 | GM12878 | blood: | n/a | n/a |
35 | ATF3 | chr22:23284481-23286273 | K562 | blood: | n/a | n/a |
36 | ATF3 | chr22:23296764-23297193 | K562 | blood: | n/a | n/a |
37 | ATF3 | chr22:23301076-23301768 | K562 | blood: | n/a | n/a |
38 | BACH1 | chr22:23279302-23279479 | H1-hESC | embryonic stem cell: | n/a | n/a |
39 | BACH1 | chr22:23304757-23304930 | K562 | blood: | n/a | n/a |
40 | BACH1 | chr22:23331722-23331895 | K562 | blood: | n/a | n/a |
41 | BATF | chr22:23274036-23274442 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr22:23277663-23278179 | GM12878 | blood: | n/a | n/a |
43 | BATF | chr22:23284867-23285222 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr22:23277686-23278091 | GM12878 | blood: | n/a | n/a |
45 | BCL11A | chr22:23277591-23278142 | GM12878 | blood: | n/a | chr22:23277928-23277937 |
46 | BCL11A | chr22:23277590-23278282 | GM12878 | blood: | n/a | chr22:23277928-23277937 |
47 | BCL11A | chr22:23274059-23274393 | GM12878 | blood: | n/a | chr22:23274243-23274252 |
48 | BCL11A | chr22:23274000-23274473 | GM12878 | blood: | n/a | chr22:23274243-23274252 |
49 | BCL3 | chr22:23273934-23274465 | GM12878 | blood: | n/a | chr22:23274243-23274252 |
50 | BCL3 | chr22:23277522-23278255 | GM12878 | blood: | n/a | chr22:23277928-23277937 |
No data |
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:23112482..23113319-chr22:23284645..23285620,4 | K562 | blood: | |
2 | chr22:23301060..23302071-chr9:133873402..133874393,9 | K562 | blood: | |
3 | chr22:23053224..23053871-chr22:23297844..23298702,2 | K562 | blood: | |
4 | chr22:23291324..23292487-chr22:23300573..23301627,3 | K562 | blood: | |
5 | chr22:23319787..23321847-chr22:23327565..23331301,3 | K562 | blood: | |
6 | chr22:23269159..23271034-chr22:23285763..23287373,2 | K562 | blood: | |
7 | chr22:23300037..23302100-chr22:23469484..23472123,54 | MCF-7 | breast: | |
8 | chr22:23257526..23260347-chr22:23270856..23273684,2 | MCF-7 | breast: | |
9 | chr22:23262649..23264269-chr22:23275725..23277382,2 | K562 | blood: | |
10 | chr22:23321553..23324482-chr22:23335529..23337461,2 | K562 | blood: | |
11 | chr22:23286541..23288859-chr22:23290512..23293076,4 | K562 | blood: | |
12 | chr22:23284838..23286479-chr22:23301714..23303911,2 | K562 | blood: | |
13 | chr22:23315568..23317235-chr22:23404346..23406388,2 | K562 | blood: | |
14 | chr22:23251853..23252558-chr22:23295506..23296354,3 | MCF-7 | breast: | |
15 | chr22:23221282..23222436-chr22:23297430..23298768,6 | K562 | blood: | |
16 | chr22:23221440..23222221-chr22:23297786..23298354,2 | MCF-7 | breast: | |
17 | chr22:23299672..23301787-chr22:23610820..23612474,2 | K562 | blood: | |
18 | chr22:23219288..23219961-chr22:23301164..23301804,2 | K562 | blood: | |
19 | chr22:23201841..23202838-chr22:23297832..23298505,2 | K562 | blood: | |
20 | chr22:23301094..23302297-chr9:133738458..133739650,7 | K562 | blood: | |
21 | chr22:23301036..23302224-chr9:133921813..133922729,7 | K562 | blood: | |
22 | chr22:23302245..23304998-chr22:23365475..23368091,3 | K562 | blood: | |
23 | chr22:23302255..23302789-chr22:23727921..23728846,2 | MCF-7 | breast: | |
24 | chr22:23283899..23286228-chr22:23288836..23291377,2 | K562 | blood: | |
25 | chr22:23190217..23192140-chr22:23297702..23298803,18 | K562 | blood: | |
26 | chr22:23321553..23324482-chr22:23335529..23337461,2 | K562 | blood: | |
27 | chr22:23095780..23096787-chr22:23297638..23298767,10 | K562 | blood: | |
28 | chr22:23301147..23302267-chr22:23472305..23473430,4 | K562 | blood: | |
29 | chr22:23175251..23177707-chr22:23277255..23279235,2 | K562 | blood: | |
30 | chr22:23098299..23098965-chr22:23297613..23298499,2 | K562 | blood: | |
31 | chr22:23301549..23302724-chr22:23327158..23327956,3 | K562 | blood: | |
32 | chr22:22818017..22819078-chr22:23297702..23298769,7 | K562 | blood: | |
33 | chr22:23214471..23217430-chr22:23295517..23297534,2 | K562 | blood: | |
34 | chr22:23152352..23153037-chr22:23301206..23301893,2 | K562 | blood: | |
35 | chr22:23292544..23295417-chr22:23296767..23298296,2 | K562 | blood: | |
36 | chr22:23112664..23113297-chr22:23297048..23297785,2 | K562 | blood: | |
37 | chr22:23283899..23288368-chr22:23289284..23293076,7 | K562 | blood: | |
38 | chr22:23197959..23198625-chr22:23297727..23298760,3 | MCF-7 | breast: | |
39 | chr22:23286541..23288859-chr22:23290512..23293076,4 | K562 | blood: | |
40 | chr22:23333630..23336043-chr22:23523399..23525506,2 | K562 | blood: | |
41 | chr22:23281421..23283891-chr22:23290438..23292257,2 | K562 | blood: | |
42 | chr22:23112339..23113246-chr22:23300723..23301542,2 | K562 | blood: | |
43 | chr22:22818525..22819033-chr22:23284603..23285187,2 | K562 | blood: | |
44 | chr22:23302491..23304383-chr22:23468441..23470876,3 | K562 | blood: | |
45 | chr22:23285600..23288138-chr22:23326228..23328719,2 | K562 | blood: | |
46 | chr22:23283587..23284135-chr22:23298210..23298770,2 | K562 | blood: | |
47 | chr22:23301153..23301965-chr22:23727829..23728713,3 | K562 | blood: | |
48 | chr22:23190251..23190811-chr22:23300574..23301389,3 | MCF-7 | breast: | |
49 | chr22:23195451..23196440-chr22:23280544..23281196,2 | K562 | blood: | |
50 | chr22:23197941..23198519-chr22:23296672..23297562,5 | MCF-7 | breast: |
(count:3 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-GNAZ-2 | chr22:23336329-23336395 | NONHSAT083840 |
2 | lnc-D87017.1-4 | chr22:23330438-23330756 | NONHSAT083839 |
3 | lnc-GNAZ-2 | chr22:23332865-23332952 | NONHSAT083840 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000237472 | TF binding region |
ENSG00000223679 | TF binding region |
ENSG00000128266 | chromatin interactions |
ENSG00000100228 | chromatin interactions |
ENSG00000211663 | chromatin interactions |
ENSG00000133519 | chromatin interactions |
ENSG00000223679 | chromatin interactions |
ENSG00000221069 | chromatin interactions |
ENSG00000207832 | chromatin interactions |
ENSG00000253963 | chromatin interactions |
ENSG00000215417 | chromatin interactions |
ENSG00000211685 | chromatin interactions |
ENSG00000186716 | chromatin interactions |
ENSG00000100218 | chromatin interactions |
ENSG00000253448 | chromatin interactions |
ENSG00000211655 | chromatin interactions |
ENSG00000237472 | chromatin interactions |
ENSG00000211672 | chromatin interactions |
ENSG00000211680 | chromatin interactions |
ENSG00000254030 | chromatin interactions |
ENSG00000237127 | chromatin interactions |
ENSG00000211679 | chromatin interactions |
ENSG00000264824 | chromatin interactions |
ENSG00000099949 | chromatin interactions |
ENSG00000211684 | chromatin interactions |
ENSG00000236794 | chromatin interactions |
ENSG00000211673 | chromatin interactions |
ENSG00000211682 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs150910242 | chr22:23273164-23273165 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
2 | rs562167108 | chr22:23273170-23273171 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
3 | rs527444218 | chr22:23273172-23273173 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
4 | rs541245382 | chr22:23273210-23273211 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
5 | rs74822035 | chr22:23273245-23273246 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
6 | rs60433737 | chr22:23273259-23273260 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
7 | rs373066355 | chr22:23273268-23273269 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
8 | rs549738108 | chr22:23273269-23273270 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
9 | rs34135475 | chr22:23273324-23273325 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
10 | rs5759539 | chr22:23273350-23273351 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
11 | rs532902484 | chr22:23273361-23273362 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
12 | rs531026092 | chr22:23273369-23273370 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
13 | rs528858422 | chr22:23273388-23273389 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
14 | rs377201131 | chr22:23273402-23273403 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
15 | rs369114864 | chr22:23273416-23273417 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
16 | rs534097203 | chr22:23273452-23273453 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
17 | rs554097910 | chr22:23273485-23273486 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
18 | rs571108101 | chr22:23273506-23273507 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
19 | rs539785865 | chr22:23273516-23273517 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
20 | rs556517533 | chr22:23273518-23273519 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
21 | rs576459476 | chr22:23273519-23273520 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
22 | rs542254277 | chr22:23273534-23273535 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
23 | rs555865062 | chr22:23273548-23273549 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
24 | rs572594613 | chr22:23273564-23273565 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
25 | rs34405952 | chr22:23273573-23273574 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
26 | rs541206954 | chr22:23273575-23273576 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
27 | rs540202394 | chr22:23273582-23273583 | Weak transcription Enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
28 | rs564163254 | chr22:23273639-23273640 | Enhancers Weak transcription Strong transcription Flanking Active TSS | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
29 | rs116477377 | chr22:23273640-23273641 | Enhancers Weak transcription Strong transcription Flanking Active TSS | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
30 | rs543302717 | chr22:23273646-23273647 | Enhancers Weak transcription Strong transcription Flanking Active TSS | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
31 | rs563606377 | chr22:23273649-23273650 | Enhancers Weak transcription Strong transcription Flanking Active TSS | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
32 | rs528821802 | chr22:23273658-23273659 | Enhancers Weak transcription Strong transcription Flanking Active TSS | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
33 | rs181221278 | chr22:23273681-23273682 | Enhancers Weak transcription Strong transcription Flanking Active TSS | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
34 | rs371710385 | chr22:23273699-23273700 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
35 | rs528205394 | chr22:23273700-23273701 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
36 | rs547961009 | chr22:23273736-23273737 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
37 | rs571003244 | chr22:23273737-23273738 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
38 | rs138281802 | chr22:23273744-23273745 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
39 | rs143879855 | chr22:23273773-23273774 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
40 | rs117417140 | chr22:23273777-23273778 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
41 | rs570379609 | chr22:23273799-23273800 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
42 | rs535823623 | chr22:23273808-23273809 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
43 | rs555828370 | chr22:23273829-23273830 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
44 | rs572558406 | chr22:23273839-23273840 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
45 | rs535398569 | chr22:23273862-23273863 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
46 | rs76937492 | chr22:23273864-23273865 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
47 | rs557932221 | chr22:23273867-23273868 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
48 | rs186197627 | chr22:23273885-23273886 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
49 | rs375690615 | chr22:23273903-23273904 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
50 | rs543616607 | chr22:23273926-23273927 | Enhancers Weak transcription Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22495311 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Breast cancer | 21858162 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Developmental delay | 21147756 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Asthma | 21956041 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Colorectal cancer | 21128281 | CNVD |
Systemic lupus erythematosus | 21956041 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
22q11.23 microdeletion syndrome | 19193630 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Chronic myeloid leukemia | 21384125 | CNVD |
Autism | 20841430 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Breast cancer | 21785460 | CNVD |
Medullary thyroid carcinoma | 18765511 | CNVD |
Lung cancer | 18438408 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Ependymoma | 20639864 | CNVD |
Schizophrenia | 17989066 | CNVD |
Cancer | 20164919 | CNVD |
Breast cancer | 22522925 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:23259400-23290200 | Enhancers | Primary B cells from peripheral blood | blood |
2 | chr22:23263600-23289400 | Enhancers | Primary B cells from cord blood | blood |
3 | chr22:23266200-23278800 | Enhancers | Primary monocytes fromperipheralblood | blood |
4 | chr22:23268000-23275000 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
5 | chr22:23268400-23278800 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
6 | chr22:23268800-23274400 | Enhancers | Spleen | Spleen |
7 | chr22:23269000-23273800 | Enhancers | Primary mononuclear cells fromperipheralblood | Blood |
8 | chr22:23270000-23274000 | Enhancers | Fetal Muscle Trunk | muscle |
9 | chr22:23270400-23273400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
10 | chr22:23270400-23274000 | Enhancers | Primary hematopoietic stem cells | blood |
11 | chr22:23270600-23273600 | Weak transcription | Duodenum Mucosa | Duodenum |
12 | chr22:23271200-23273600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
13 | chr22:23271200-23278000 | Strong transcription | Right Atrium | heart |
14 | chr22:23271600-23273400 | Enhancers | HSMMtube | muscle |
15 | chr22:23271600-23273800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
16 | chr22:23271600-23274600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
17 | chr22:23272000-23275600 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
18 | chr22:23272400-23279400 | Enhancers | Monocytes-CD14+_RO01746 | blood |
19 | chr22:23272400-23281000 | Weak transcription | Dnd41 | blood |
20 | chr22:23272600-23273200 | Enhancers | GM12878-XiMat | blood |
21 | chr22:23273200-23275200 | Flanking Active TSS | GM12878-XiMat | blood |
22 | chr22:23273400-23274600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
23 | chr22:23273400-23278400 | Weak transcription | HSMMtube | muscle |
24 | chr22:23273600-23274000 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
25 | chr22:23273600-23274000 | Enhancers | Duodenum Mucosa | Duodenum |
26 | chr22:23273800-23275200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
27 | chr22:23273800-23277400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
28 | chr22:23274000-23274400 | Weak transcription | Primary hematopoietic stem cells | blood |
29 | chr22:23274000-23274800 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
30 | chr22:23274000-23274800 | Enhancers | Fetal Muscle Leg | muscle |
31 | chr22:23274200-23276400 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
32 | chr22:23274400-23274600 | Enhancers | Primary hematopoietic stem cells | blood |
33 | chr22:23274400-23274600 | Flanking Active TSS | Spleen | Spleen |
34 | chr22:23274600-23274800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
35 | chr22:23274600-23274800 | Enhancers | Rectal Mucosa Donor 31 | rectum |
36 | chr22:23274600-23274800 | Enhancers | Spleen | Spleen |
37 | chr22:23274600-23277000 | Weak transcription | Primary hematopoietic stem cells | blood |
38 | chr22:23274800-23275000 | Enhancers | Colonic Mucosa | Colon |
39 | chr22:23274800-23275000 | Flanking Active TSS | Spleen | Spleen |
40 | chr22:23274800-23276600 | Weak transcription | Fetal Muscle Leg | muscle |
41 | chr22:23275000-23275600 | Enhancers | Spleen | Spleen |
42 | chr22:23275000-23276600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
43 | chr22:23275200-23275400 | Enhancers | Primary mononuclear cells fromperipheralblood | Blood |
44 | chr22:23275200-23277200 | Enhancers | GM12878-XiMat | blood |
45 | chr22:23275400-23275800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
46 | chr22:23275600-23275800 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
47 | chr22:23275600-23276400 | Flanking Active TSS | Spleen | Spleen |
48 | chr22:23275800-23278400 | Enhancers | Primary mononuclear cells fromperipheralblood | Blood |
49 | chr22:23276000-23276200 | Bivalent Enhancer | Foreskin Melanocyte Primary Cells skin01 | Skin |
50 | chr22:23276000-23276200 | Enhancers | Colonic Mucosa | Colon |