Variant report

Variant nsv1056726
Chromosome Location chr18:28978180-29049614
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:306 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:28973600-28989400 Weak transcription Esophagus oesophagus
2 chr18:28975000-28983400 Enhancers Fetal Intestine Large intestine
3 chr18:28976200-28983600 Enhancers Fetal Intestine Small intestine
4 chr18:28976600-28978400 Enhancers Small Intestine intestine
5 chr18:28976600-28979400 Enhancers Sigmoid Colon Sigmoid Colon
6 chr18:28976800-28980200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr18:28977000-28979400 Enhancers Rectal Mucosa Donor 31 rectum
8 chr18:28977200-28979200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr18:28977400-28979200 Enhancers Rectal Mucosa Donor 29 rectum
10 chr18:28977400-28980600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr18:28977400-28981200 Enhancers HepG2 liver
12 chr18:28977400-28981600 Weak transcription Fetal Kidney kidney
13 chr18:28977600-28979200 Weak transcription Stomach Mucosa stomach
14 chr18:28977600-28980000 Weak transcription Liver Liver
15 chr18:28977600-28980200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr18:28977800-28979200 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr18:28977800-28979200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr18:28977800-28979600 Weak transcription A549 lung
19 chr18:28977800-28981200 Weak transcription Fetal Lung lung
20 chr18:28978000-28979200 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr18:28978000-28981600 Enhancers Duodenum Mucosa Duodenum
22 chr18:28978400-28983200 Weak transcription Small Intestine intestine
23 chr18:28979200-28979400 Enhancers Primary hematopoietic stem cells short term culture blood
24 chr18:28979200-28979400 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr18:28979200-28979400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
26 chr18:28979200-28980200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr18:28979200-28980200 Enhancers Primary neutrophils fromperipheralblood blood
28 chr18:28979200-28980200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr18:28979200-28980200 Enhancers Colon Smooth Muscle Colon
30 chr18:28979200-28980200 Enhancers Stomach Mucosa stomach
31 chr18:28979200-28980600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr18:28979400-28979800 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr18:28979400-28980200 Active TSS Rectal Mucosa Donor 29 rectum
34 chr18:28979400-28980200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
35 chr18:28979400-28980400 Enhancers HMEC breast
36 chr18:28979600-28979800 Bivalent Enhancer NH-A brain
37 chr18:28979600-28980400 Enhancers Primary hematopoietic stem cells blood
38 chr18:28979600-28980600 Enhancers A549 lung
39 chr18:28979800-28980000 Bivalent Enhancer Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr18:28979800-28980600 Enhancers Primary hematopoietic stem cells short term culture blood
41 chr18:28979800-28980600 Enhancers NH-A brain
42 chr18:28980000-28981400 Enhancers Liver Liver
43 chr18:28980200-28980400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr18:28980200-28980400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr18:28980200-28980400 Enhancers Rectal Mucosa Donor 29 rectum
46 chr18:28980200-28981200 Weak transcription Colon Smooth Muscle Colon
47 chr18:28980200-28981200 Weak transcription Stomach Mucosa stomach
48 chr18:28980200-28982400 Enhancers Rectal Mucosa Donor 31 rectum
49 chr18:28980400-28981000 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr18:28980400-28981600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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