Variant report

Variant	nsv1056825
Chromosome Location	chr19:52103914-52359815
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:6085)
CpG islands
(count:5197)
Chromatin interactive
region (count:259)
LncRNA
region (count:34)
Mature miRNA
region (count: 6)
miRNA target
sites (count:0)

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No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:52298176-52298372	K562	blood:	n/a	n/a
2	ARID3A	chr19:52302554-52302890	K562	blood:	n/a	n/a
3	ARID3A	chr19:52216127-52216237	K562	blood:	n/a	n/a
4	ARID3A	chr19:52168345-52168570	K562	blood:	n/a	n/a
5	ARID3A	chr19:52288166-52289145	K562	blood:	n/a	n/a
6	ARID3A	chr19:52333617-52333822	K562	blood:	n/a	n/a
7	ARID3A	chr19:52286712-52286989	K562	blood:	n/a	n/a
8	ARID3A	chr19:52160074-52160493	K562	blood:	n/a	n/a
9	ARID3A	chr19:52313557-52313692	K562	blood:	n/a	n/a
10	ARID3A	chr19:52140651-52140961	K562	blood:	n/a	n/a
11	ARID3A	chr19:52308170-52308456	HepG2	liver:	n/a	n/a
12	ARID3A	chr19:52299117-52300997	K562	blood:	n/a	n/a
13	ARID3A	chr19:52306606-52307609	K562	blood:	n/a	n/a
14	ARID3A	chr19:52310240-52311002	K562	blood:	n/a	n/a
15	ARID3A	chr19:52274862-52275001	K562	blood:	n/a	n/a
16	ARID3A	chr19:52204981-52205633	K562	blood:	n/a	n/a
17	ARID3A	chr19:52307809-52308459	K562	blood:	n/a	n/a
18	ARID3A	chr19:52207264-52207483	K562	blood:	n/a	n/a
19	ARID3A	chr19:52311894-52312194	K562	blood:	n/a	n/a
20	ARID3A	chr19:52313645-52313812	HepG2	liver:	n/a	n/a
21	ARID3A	chr19:52303443-52304384	K562	blood:	n/a	n/a
22	ARID3A	chr19:52237226-52237413	K562	blood:	n/a	n/a
23	ARID3A	chr19:52281095-52281512	K562	blood:	n/a	n/a
24	ARID3A	chr19:52164382-52164598	K562	blood:	n/a	n/a
25	ATF1	chr19:52286699-52286989	K562	blood:	n/a	n/a
26	ATF1	chr19:52204949-52205376	K562	blood:	n/a	n/a
27	ATF1	chr19:52302531-52302910	K562	blood:	n/a	n/a
28	ATF1	chr19:52290370-52290609	K562	blood:	n/a	n/a
29	ATF1	chr19:52325702-52325884	K562	blood:	n/a	n/a
30	ATF1	chr19:52313567-52313801	K562	blood:	n/a	n/a
31	ATF1	chr19:52288144-52288776	K562	blood:	n/a	n/a
32	ATF1	chr19:52124551-52124727	K562	blood:	n/a	n/a
33	ATF1	chr19:52239296-52239871	K562	blood:	n/a	n/a
34	ATF1	chr19:52237092-52237389	K562	blood:	n/a	n/a
35	ATF1	chr19:52310327-52310825	K562	blood:	n/a	n/a
36	ATF1	chr19:52243137-52243393	K562	blood:	n/a	n/a
37	ATF1	chr19:52154746-52155090	K562	blood:	n/a	n/a
38	ATF1	chr19:52303528-52304254	K562	blood:	n/a	n/a
39	ATF1	chr19:52308082-52308473	K562	blood:	n/a	n/a
40	ATF1	chr19:52282997-52283290	K562	blood:	n/a	n/a
41	ATF1	chr19:52299358-52299816	K562	blood:	n/a	n/a
42	ATF2	chr19:52110184-52110820	GM12878	blood:	n/a	n/a
43	ATF2	chr19:52110139-52110917	GM12878	blood:	n/a	n/a
44	ATF2	chr19:52124388-52124859	GM12878	blood:	n/a	n/a
45	ATF2	chr19:52154376-52154835	GM12878	blood:	n/a	n/a
46	ATF2	chr19:52105602-52106196	GM12878	blood:	n/a	n/a
47	ATF2	chr19:52113850-52114201	GM12878	blood:	n/a	n/a
48	ATF2	chr19:52207454-52207804	GM12878	blood:	n/a	chr19:52207657-52207671
49	ATF2	chr19:52205683-52206074	H1-hESC	embryonic stem cell:	n/a	n/a
50	ATF3	chr19:52111276-52111502	K562	blood:	n/a	n/a

(count:5197 , 50 per page) page: 1 2 3 4 5 6 7 ... 104

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:52213977-52214027	HEK293	kidney:	embryo
2	chr19:52193776-52193826	AoSMC	blood vessel:	n/a
3	chr19:52227357-52227407	NHBE	bronchial:	n/a
4	chr19:52104419-52104469	RPTEC	kidney:	n/a
5	chr19:52265748-52265798	LNCaP	prostate:	n/a
6	chr19:52210193-52210243	MCF-7	breast:	n/a
7	chr19:52228038-52228088	PrEC	prostate:	n/a
8	chr19:52266482-52266532	HUVEC	blood vessel:	n/a
9	chr19:52150547-52150597	NT2-D1	testis:	n/a
10	chr19:52148354-52148404	CMK	blood:	n/a
11	chr19:52209628-52209678	NH-A	brain:	n/a
12	chr19:52207653-52207703	GM12892	blood:	n/a
13	chr19:52213977-52214027	HEK293	kidney:	embryo
14	chr19:52193776-52193826	AoSMC	blood vessel:	n/a
15	chr19:52227357-52227407	NHBE	bronchial:	n/a
16	chr19:52104419-52104469	RPTEC	kidney:	n/a
17	chr19:52265748-52265798	LNCaP	prostate:	n/a
18	chr19:52210193-52210243	MCF-7	breast:	n/a
19	chr19:52228038-52228088	PrEC	prostate:	n/a
20	chr19:52266482-52266532	HUVEC	blood vessel:	n/a
21	chr19:52150547-52150597	NT2-D1	testis:	n/a
22	chr19:52148354-52148404	CMK	blood:	n/a
23	chr19:52209628-52209678	NH-A	brain:	n/a
24	chr19:52207653-52207703	GM12892	blood:	n/a
25	chr19:52227309-52227359	H1-hESC	embryonic stem cell:	embryo
26	chr19:52266642-52266692	U87	brain:	n/a
27	chr19:52134296-52134346	MCF10A-Er-Src	breast:	n/a
28	chr19:52150233-52150283	HL-60	blood:	n/a
29	chr19:52193933-52193983	NH-A	brain:	n/a
30	chr19:52264429-52264479	SK-N-SH_RA	brain:	n/a
31	chr19:52223099-52223149	HCM	heart:	n/a
32	chr19:52255673-52255723	PANC-1	pancreas:	n/a
33	chr19:52297519-52297569	NH-A	brain:	n/a
34	chr19:52265748-52265798	MCF-7	breast:	n/a
35	chr19:52210193-52210243	AG09319	gingival:	n/a
36	chr19:52207653-52207703	SAEC	small airway:	n/a
37	chr19:52222446-52222496	SK-N-MC	brain:	n/a
38	chr19:52134296-52134346	ProgFib	skin:	n/a
39	chr19:52217388-52217438	RPTEC	kidney:	n/a
40	chr19:52134296-52134346	AG10803	skin:	n/a
41	chr19:52104632-52104682	HEK293	kidney:	embryo
42	chr19:52266642-52266692	HCM	heart:	n/a
43	chr19:52193776-52193826	CMK	blood:	n/a
44	chr19:52222446-52222496	BJ	skin:	n/a
45	chr19:52262969-52263019	RPTEC	kidney:	n/a
46	chr19:52131310-52131360	GM12878	blood:	n/a
47	chr19:52297968-52298018	HCF	heart:	n/a
48	chr19:52195559-52195609	GM19239	blood:	n/a
49	chr19:52218453-52218503	A549	lung:	n/a
50	chr19:52227357-52227407	NHDF-neo	bronchial:	n/a

(count:259 , 50 per page) page: 1 2 3 4 5 6

No.	Distal block	Cell Line	Cell type
1	chr19:52279714..52282274-chr19:52309726..52312482,2	MCF-7	breast:
2	chr19:52216500..52217173-chr19:52286806..52287310,2	MCF-7	breast:
3	chr19:52264566..52267681-chr19:52268997..52272339,3	K562	blood:
4	chr19:52175247..52176993-chr19:52183219..52185432,2	MCF-7	breast:
5	chr19:52110881..52111404-chr19:52311887..52312611,2	K562	blood:
6	chr19:51874861..51877749-chr19:52158879..52160406,2	K562	blood:
7	chr19:52168318..52169067-chr19:52178944..52179486,2	K562	blood:
8	chr19:52347112..52349740-chr19:52362561..52364697,2	K562	blood:
9	chr19:52295157..52297364-chr19:52306223..52308854,2	MCF-7	breast:
10	chr19:52107630..52109611-chr19:52113682..52115927,2	K562	blood:
11	chr19:52172705..52175855-chr19:52179589..52183414,3	K562	blood:
12	chr19:52213445..52215561-chr19:52311102..52312961,2	MCF-7	breast:
13	chr19:52160319..52160911-chr19:52311474..52312517,3	K562	blood:
14	chr19:52202858..52204622-chr19:52205680..52207387,2	K562	blood:
15	chr19:52163388..52165647-chr19:52189785..52191588,2	MCF-7	breast:
16	chr19:52014761..52015333-chr19:52159948..52160615,2	MCF-7	breast:
17	chr19:52276673..52280164-chr19:52282818..52285281,3	K562	blood:
18	chr19:52281378..52282199-chr19:52310053..52311134,3	MCF-7	breast:
19	chr19:52213474..52215839-chr19:52229447..52232151,2	K562	blood:
20	chr19:52195958..52197871-chr19:52199159..52203308,3	MCF-7	breast:
21	chr19:52288499..52290197-chr19:52294981..52296482,2	MCF-7	breast:
22	chr19:52140352..52141294-chr19:52160036..52160673,2	K562	blood:
23	chr19:52204536..52207246-chr19:52231773..52233515,2	K562	blood:
24	chr19:52211595..52213921-chr19:52286963..52288731,2	MCF-7	breast:
25	chr19:52264566..52267681-chr19:52268997..52272339,3	K562	blood:
26	chr19:52299823..52301344-chr19:52301707..52303402,2	K562	blood:
27	chr19:52306935..52308670-chr19:52309140..52312015,2	K562	blood:
28	chr19:52110556..52111829-chr19:52157738..52158676,7	MCF-7	breast:
29	chr19:51975913..51977254-chr19:52159906..52161263,12	MCF-7	breast:
30	chr19:52107187..52109556-chr19:52121301..52123809,2	K562	blood:
31	chr19:52285688..52288417-chr19:52288540..52290240,2	K562	blood:
32	chr19:52344484..52346538-chr19:52349352..52351510,2	K562	blood:
33	chr19:51975672..51976584-chr19:52164011..52164572,3	MCF-7	breast:
34	chr19:52327504..52330084-chr19:52332158..52334716,2	K562	blood:
35	chr19:51869555..51871818-chr19:52192464..52195337,3	MCF-7	breast:
36	chr19:52277252..52280164-chr19:52282818..52285281,2	K562	blood:
37	chr19:52205132..52207221-chr19:52208927..52210926,2	K562	blood:
38	chr19:52209655..52212195-chr19:52248161..52250236,2	K562	blood:
39	chr19:52166500..52170915-chr19:52189684..52193816,5	MCF-7	breast:
40	chr19:51868121..51870952-chr19:52184825..52187480,2	MCF-7	breast:
41	chr19:52191055..52194888-chr19:52301421..52305190,4	MCF-7	breast:
42	chr19:52277252..52280164-chr19:52282818..52285281,2	K562	blood:
43	chr19:52191235..52193231-chr19:52302966..52304607,2	MCF-7	breast:
44	chr19:51925281..51925822-chr19:52159922..52160574,2	MCF-7	breast:
45	chr19:52113611..52116176-chr19:52178728..52181472,2	MCF-7	breast:
46	chr19:52286760..52288347-chr19:52288825..52290368,2	MCF-7	breast:
47	chr19:52110839..52111869-chr19:52159924..52160844,8	MCF-7	breast:
48	chr19:52300406..52303800-chr19:52305611..52308534,3	K562	blood:
49	chr19:52210196..52213453-chr19:52222345..52225170,3	K562	blood:
50	chr19:52346478..52349117-chr19:52352769..52355551,2	K562	blood:

(count:34 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF577-2	chr19:52346074-52346168	NONHSAT067481
2	lnc-ZNF175-3	chr19:52109308-52109403	NONHSAT067455
3	lnc-ZNF577-2	chr19:52346074-52346186	NONHSAT067482
4	lnc-ZNF649-3	chr19:52359063-52359220	NONHSAT067488
5	lnc-ZNF577-2	chr19:52346442-52346577	ENSG00000269483.1
6	lnc-ZNF649-3	chr19:52359057-52359220	NONHSAT067486
7	lnc-ZNF649-3	chr19:52359056-52359220	NR_024181
8	lnc-FPR1-1	chr19:52282890-52283234	XLOC_013388
9	lnc-ZNF577-2	chr19:52346074-52346166	ENSG00000269483.1
10	lnc-FPR2-1	chr19:52204911-52205023	ENSG00000182310.8
11	lnc-FPR1-1	chr19:52284430-52284599	NONHSAT067476
12	lnc-ZNF649-3	chr19:52359056-52359220	NONHSAT067485
13	lnc-ZNF577-2	chr19:52343146-52343370	NONHSAT067481
14	lnc-ZNF577-2	chr19:52317206-52317230	NONHSAT067481
15	lnc-FPR2-1	chr19:52197463-52197808	ENSG00000182310.8
16	lnc-ZNF175-5	chr19:52152115-52152863	NONHSAT067458
17	lnc-ZNF577-3	chr19:52314710-52314992	NONHSAT067477
18	lnc-ZNF175-4	chr19:52124389-52124954	NONHSAT067457
19	lnc-ZNF577-2	chr19:52343024-52343132	ENSG00000268316.1
20	lnc-SIGLEC14-1	chr19:52133354-52133469	ENSG00000258669.1
21	lnc-ZNF175-3	chr19:52104965-52104999	NONHSAT067455
22	lnc-ZNF577-2	chr19:52343177-52343370	ENSG00000269483.1
23	lnc-ZNF577-3	chr19:52307980-52308507	NONHSAT067477
24	lnc-HAS1-1	chr19:52190491-52192335	NONHSAT067461
25	lnc-ZNF577-2	chr19:52343756-52344198	ENSG00000268316.1
26	lnc-FPR1-1	chr19:52284430-52284578	XLOC_013388
27	lnc-FPR1-1	chr19:52283028-52283234	NONHSAT067476
28	lnc-SIGLEC14-1	chr19:52148730-52148798	ENSG00000258669.1
29	lnc-FPR1-1	chr19:52286673-52286772	NONHSAT067476
30	lnc-ZNF577-3	chr19:52307980-52308424	NONHSAT067478
31	lnc-ZNF577-2	chr19:52342867-52343370	NONHSAT067482
32	lnc-ZNF175-3	chr19:52105456-52105735	NONHSAT067455
33	lnc-ZNF577-3	chr19:52314710-52314992	NONHSAT067478
34	lnc-SIGLEC14-1	chr19:52133552-52133919	ENSG00000258669.1

miRNA name	Chromosome Location	mirBase accession
hsa-miR-99b-3p	chr19:52195909-52195930	MIMAT0004678
hsa-let-7e-3p	chr19:52196091-52196112	MIMAT0004485
hsa-miR-99b-5p	chr19:52195871-52195892	MIMAT0000689
hsa-let-7e-5p	chr19:52196046-52196067	MIMAT0000066
hsa-miR-125a-5p	chr19:52196521-52196544	MIMAT0000443
hsa-miR-125a-3p	chr19:52196559-52196580	MIMAT0004602

No data

Variant related genes	Relation type
HAS1	TF binding region
SIGLEC14	TF binding region
ENSG00000238486	TF binding region
MIR99B	TF binding region
ENSG00000268316	TF binding region
FPR1	TF binding region
SPACA6P-AS	TF binding region
MIR125A	TF binding region
FPR2	TF binding region
ENSG00000269388	TF binding region
MIRLET7E	TF binding region
ENSG00000269483	TF binding region
FPR3	TF binding region
SPACA6P	TF binding region
RPL9P33	TF binding region
ENSG00000268500	TF binding region
RPL7P51	TF binding region
SIGLEC5	TF binding region
ENSG00000273318	TF binding region
HAS1	CpG island
SIGLEC14	CpG island
ENSG00000238486	CpG island
MIR99B	CpG island
ENSG00000268316	CpG island
FPR1	CpG island
SPACA6P-AS	CpG island
MIR125A	CpG island
FPR2	CpG island
ENSG00000269388	CpG island
MIRLET7E	CpG island
ENSG00000269483	CpG island
FPR3	CpG island
SPACA6P	CpG island
RPL9P33	CpG island
ENSG00000268500	CpG island
RPL7P51	CpG island
SIGLEC5	CpG island
ENSG00000273318	CpG island
ENSG00000269959	chromatin interactions
ENSG00000105366	chromatin interactions
ENSG00000207550	chromatin interactions
ENSG00000187474	chromatin interactions
ENSG00000269403	chromatin interactions
ENSG00000213822	chromatin interactions
ENSG00000238486	chromatin interactions
ENSG00000105379	chromatin interactions
ENSG00000226696	chromatin interactions
ENSG00000160318	chromatin interactions
ENSG00000198972	chromatin interactions
ENSG00000105509	chromatin interactions
ENSG00000268520	chromatin interactions
ENSG00000167765	chromatin interactions
ENSG00000196214	chromatin interactions
ENSG00000171049	chromatin interactions
ENSG00000229980	chromatin interactions
ENSG00000182310	chromatin interactions
ENSG00000141232	chromatin interactions
ENSG00000171848	chromatin interactions
ENSG00000269483	chromatin interactions
ENSG00000139644	chromatin interactions
ENSG00000105501	chromatin interactions
ENSG00000105374	chromatin interactions
ENSG00000268957	chromatin interactions
ENSG00000167615	chromatin interactions
ENSG00000208008	chromatin interactions
ENSG00000171051	chromatin interactions
ENSG00000161551	chromatin interactions
ENSG00000273318	chromatin interactions
ENSG00000198093	chromatin interactions
ENSG00000267808	chromatin interactions
ENSG00000269388	chromatin interactions
ENSG00000244071	chromatin interactions
CDKN1A	Mature miRNA region
COL4A1	Mature miRNA region
RCOR3	Mature miRNA region
FKBP4	Mature miRNA region
CBX5	Mature miRNA region
MAP2K7	Mature miRNA region
LAMB1	Mature miRNA region
IP6K2	Mature miRNA region
FAM160B1	Mature miRNA region
SPAG9	Mature miRNA region
SERBP1	Mature miRNA region
ELMSAN1	Mature miRNA region
WDR48	Mature miRNA region
UROC1	Mature miRNA region
ENO2	Mature miRNA region
KATNB1	Mature miRNA region
OMA1	Mature miRNA region
COX14	Mature miRNA region
RBAK	Mature miRNA region
BAZ1B	Mature miRNA region
PAM	Mature miRNA region
MT-ND5	Mature miRNA region
TTLL12	Mature miRNA region
RBM8A	Mature miRNA region
HIPK1	Mature miRNA region
MACF1	Mature miRNA region
PEG10	Mature miRNA region
DLST	Mature miRNA region
TNPO2	Mature miRNA region
LUZP1	Mature miRNA region
PDCD11	Mature miRNA region
PPP1R2	Mature miRNA region
IRGQ	Mature miRNA region
PA2G4	Mature miRNA region
DHX57	Mature miRNA region
BAK1	Mature miRNA region
ETV6	Mature miRNA region
COPS6	Mature miRNA region
IGF2BP1	Mature miRNA region
TIMM50	Mature miRNA region
NME2	Mature miRNA region
DZIP1	Mature miRNA region
YOD1	Mature miRNA region
EIF4A3	Mature miRNA region
EIF4EBP1	Mature miRNA region
SQLE	Mature miRNA region
UBL7	Mature miRNA region
MCM3	Mature miRNA region
RBBP4	Mature miRNA region
EIF4A1	Mature miRNA region
ZMYND19	Mature miRNA region
CCDC113	Mature miRNA region
SPRTN	Mature miRNA region
SPATA13	Mature miRNA region
AGMAT	Mature miRNA region
COPS8	Mature miRNA region
TUBB4B	Mature miRNA region
NT5DC2	Mature miRNA region
HNRNPUL1	Mature miRNA region
RPL10	Mature miRNA region
RPL27A	Mature miRNA region
RBM14	Mature miRNA region
HNRNPC	Mature miRNA region
CLTC	Mature miRNA region
LRRC8A	Mature miRNA region
TMEM107	Mature miRNA region
ERBB3	Mature miRNA region
CORO1C	Mature miRNA region
CDKAL1	Mature miRNA region
NDUFB6	Mature miRNA region
ARPC5	Mature miRNA region
PC	Mature miRNA region
ZFP3	Mature miRNA region
KIAA0232	Mature miRNA region
MAP3K1	Mature miRNA region
YES1	Mature miRNA region
LYPLA1	Mature miRNA region
POLD1	Mature miRNA region
TOR1AIP2	Mature miRNA region
MMP11	Mature miRNA region
PGD	Mature miRNA region
PET112	Mature miRNA region
LEPRE1	Mature miRNA region
CTSA	Mature miRNA region
FDPS	Mature miRNA region
SKIV2L	Mature miRNA region
DIAPH1	Mature miRNA region
ARCN1	Mature miRNA region
PDP2	Mature miRNA region
SLCO4A1	Mature miRNA region
TMEM127	Mature miRNA region
MTCH2	Mature miRNA region
ZKSCAN7	Mature miRNA region
RNF26	Mature miRNA region
PSME4	Mature miRNA region
GALNT2	Mature miRNA region
ZNF284	Mature miRNA region
PLCXD1	Mature miRNA region
ATXN7L3	Mature miRNA region
RDX	Mature miRNA region
CREB5	Mature miRNA region
NOP16	Mature miRNA region
RPN2	Mature miRNA region
YIPF4	Mature miRNA region
ZFAND5	Mature miRNA region
EDC3	Mature miRNA region
PRPF8	Mature miRNA region
SLCO3A1	Mature miRNA region
WDR4	Mature miRNA region
BRCA1	Mature miRNA region
LBX2	Mature miRNA region
IVD	Mature miRNA region
ARID3B	Mature miRNA region
ZNF652	Mature miRNA region
EIF3J	Mature miRNA region
GLUL	Mature miRNA region
MS4A10	Mature miRNA region
WBSCR16	Mature miRNA region
RPS10	Mature miRNA region
RBM17	Mature miRNA region
PIGP	Mature miRNA region
CASC4	Mature miRNA region
SP1	Mature miRNA region
TBC1D1	Mature miRNA region
KRBOX4	Mature miRNA region
ARHGAP12	Mature miRNA region
MT-ND3	Mature miRNA region
COPG1	Mature miRNA region
NCLN	Mature miRNA region
H2AFZ	Mature miRNA region
NPDC1	Mature miRNA region
THADA	Mature miRNA region
CLDN12	Mature miRNA region
VEGFA	Mature miRNA region
NDST1	Mature miRNA region
ZFAND1	Mature miRNA region
DIP2A	Mature miRNA region
ZDHHC9	Mature miRNA region
PIGS	Mature miRNA region
C11orf91	Mature miRNA region
SCD	Mature miRNA region
RRAGC	Mature miRNA region
SREBF1	Mature miRNA region
TPI1	Mature miRNA region
OR7D2	Mature miRNA region
DYRK1A	Mature miRNA region
OTUB1	Mature miRNA region
RACGAP1	Mature miRNA region
UBE2G2	Mature miRNA region
GPS1	Mature miRNA region
LSR	Mature miRNA region
RAVER2	Mature miRNA region
CENPP	Mature miRNA region
EEF2	Mature miRNA region
ZBTB10	Mature miRNA region
WNT1	Mature miRNA region
MKI67	Mature miRNA region
MSMO1	Mature miRNA region
DAAM1	Mature miRNA region
RPRD2	Mature miRNA region
RPSA	Mature miRNA region
ALG13	Mature miRNA region
TRPV1	Mature miRNA region
DHFR	Mature miRNA region
PDPK1	Mature miRNA region
MTUS1	Mature miRNA region
ATXN1	Mature miRNA region
NAA60	Mature miRNA region
IRS2	Mature miRNA region
RPL9	Mature miRNA region
ZNF256	Mature miRNA region
C17orf80	Mature miRNA region
LIN28B	Mature miRNA region
RANBP2	Mature miRNA region
ALDH1B1	Mature miRNA region
MFN2	Mature miRNA region
NCKIPSD	Mature miRNA region
CHD9	Mature miRNA region
VAMP2	Mature miRNA region
OTUB2	Mature miRNA region
EIF3C	Mature miRNA region
SLC12A4	Mature miRNA region
QSOX1	Mature miRNA region
SEC23IP	Mature miRNA region
STAT2	Mature miRNA region
CWC15	Mature miRNA region
CDC5L	Mature miRNA region
SYK	Mature miRNA region
COX16	Mature miRNA region
DHX15	Mature miRNA region
MRPS2	Mature miRNA region
KIF6	Mature miRNA region
TRMT2A	Mature miRNA region
TTC8	Mature miRNA region
MT-CO1	Mature miRNA region
DCAF8	Mature miRNA region
PLS3	Mature miRNA region
SERF2	Mature miRNA region
CARM1	Mature miRNA region
CREBBP	Mature miRNA region
CLDN4	Mature miRNA region
MARCH5	Mature miRNA region
CCDC106	Mature miRNA region
LMLN	Mature miRNA region
MED13L	Mature miRNA region
RALBP1	Mature miRNA region
NUP62	Mature miRNA region
CYP2B6	Mature miRNA region
BSDC1	Mature miRNA region
MT-ATP6	Mature miRNA region
SUZ12	Mature miRNA region
EDF1	Mature miRNA region
TP53	Mature miRNA region
THRAP3	Mature miRNA region
UBE2H	Mature miRNA region
E2F7	Mature miRNA region
EEF1A1	Mature miRNA region
OAT	Mature miRNA region
GTF2I	Mature miRNA region
ANKRD40	Mature miRNA region
TCEB2	Mature miRNA region
PACS2	Mature miRNA region
PRAMEF13	Mature miRNA region
SEPW1	Mature miRNA region
MT-ND2	Mature miRNA region
UHRF1BP1	Mature miRNA region
DUSP3	Mature miRNA region
PES1	Mature miRNA region
HIST2H2BF	Mature miRNA region
CRK	Mature miRNA region
ATP5G2	Mature miRNA region
RMND5A	Mature miRNA region
STAT3	Mature miRNA region
FAM8A1	Mature miRNA region
TERF1	Mature miRNA region
ATP5J2	Mature miRNA region
NDEL1	Mature miRNA region
TNFAIP1	Mature miRNA region
PHKA1	Mature miRNA region
CA2	Mature miRNA region
TOR4A	Mature miRNA region
ZNF805	Mature miRNA region
TRRAP	Mature miRNA region
NF1	Mature miRNA region
SPCS3	Mature miRNA region
NUDT8	Mature miRNA region
SRSF2	Mature miRNA region
ARID1A	Mature miRNA region
RNMT	Mature miRNA region
CNBP	Mature miRNA region
ACTR1B	Mature miRNA region
ZZEF1	Mature miRNA region
MTOR	Mature miRNA region
GPM6B	Mature miRNA region
XPO1	Mature miRNA region
KIRREL	Mature miRNA region
KATNAL1	Mature miRNA region
YWHAQ	Mature miRNA region
BMP2K	Mature miRNA region
NUDT15	Mature miRNA region
SALL1	Mature miRNA region
NDUFA3	Mature miRNA region
FAM219B	Mature miRNA region
NR1D2	Mature miRNA region
NUP155	Mature miRNA region
KIAA0355	Mature miRNA region
C19orf48	Mature miRNA region
AHSA1	Mature miRNA region
RUNX1T1	Mature miRNA region
CLCN7	Mature miRNA region
AGO2	Mature miRNA region
SLC38A2	Mature miRNA region
NNT	Mature miRNA region
USP37	Mature miRNA region
IRS4	Mature miRNA region
RARA	Mature miRNA region
SGSM3	Mature miRNA region
WDFY3	Mature miRNA region
AMPD2	Mature miRNA region
OTUD5	Mature miRNA region
DDX39A	Mature miRNA region
TPM4	Mature miRNA region
MT-ND6	Mature miRNA region
UBN2	Mature miRNA region
TCF4	Mature miRNA region
BAHCC1	Mature miRNA region
RPA1	Mature miRNA region
POLR3D	Mature miRNA region
DTNB	Mature miRNA region
FBXO10	Mature miRNA region
NDUFS5	Mature miRNA region
IGF1R	Mature miRNA region
RAI2	Mature miRNA region
CAMSAP3	Mature miRNA region
VGLL4	Mature miRNA region
MYO9B	Mature miRNA region
SSB	Mature miRNA region
DDHD2	Mature miRNA region
CCRN4L	Mature miRNA region
HIF1AN	Mature miRNA region
PAX3	Mature miRNA region
NIN	Mature miRNA region
PRC1	Mature miRNA region
COX10	Mature miRNA region
ENSA	Mature miRNA region
ARNT2	Mature miRNA region
PDCL3	Mature miRNA region
MT-CO3	Mature miRNA region
SUGP2	Mature miRNA region
HOXA3	Mature miRNA region
SLC2A11	Mature miRNA region
UBE2V2	Mature miRNA region
APPL1	Mature miRNA region
NRSN2	Mature miRNA region
OCLN	Mature miRNA region
ZNF451	Mature miRNA region
MPL	Mature miRNA region
PHF3	Mature miRNA region
USE1	Mature miRNA region
HOXC4	Mature miRNA region
PPP2R5E	Mature miRNA region
VARS	Mature miRNA region
G2E3	Mature miRNA region
CCDC97	Mature miRNA region
UTP15	Mature miRNA region
LHFPL2	Mature miRNA region
HK2	Mature miRNA region
SNX4	Mature miRNA region
MAT2A	Mature miRNA region
TTC30B	Mature miRNA region
CABLES1	Mature miRNA region
RSL1D1	Mature miRNA region
SPN	Mature miRNA region
PIGN	Mature miRNA region
ZNF776	Mature miRNA region
HIST1H1C	Mature miRNA region
COIL	Mature miRNA region
C12orf49	Mature miRNA region
PHF23	Mature miRNA region
LRRC41	Mature miRNA region
SCYL1	Mature miRNA region
SUB1	Mature miRNA region
TFRC	Mature miRNA region
NPM1	Mature miRNA region
UGGT1	Mature miRNA region
AGTRAP	Mature miRNA region
LMNA	Mature miRNA region
PLA2G4F	Mature miRNA region
ERBB2	Mature miRNA region
TANC2	Mature miRNA region
SLC1A5	Mature miRNA region
RPL35A	Mature miRNA region
RAP1A	Mature miRNA region
PUM2	Mature miRNA region
EIF4EBP2	Mature miRNA region
CHD7	Mature miRNA region
LIN28A	Mature miRNA region
TMEM101	Mature miRNA region
TXNRD1	Mature miRNA region
PGM3	Mature miRNA region
SRGAP2	Mature miRNA region
GNG5	Mature miRNA region
PCBP2	Mature miRNA region
GMPS	Mature miRNA region
CD34	Mature miRNA region
OSTM1	Mature miRNA region
SKA2	Mature miRNA region
RABL6	Mature miRNA region
NME4	Mature miRNA region
RPS2	Mature miRNA region
RPL12	Mature miRNA region
PPP5C	Mature miRNA region
TRPS1	Mature miRNA region
EMID1	Mature miRNA region
SVIL	Mature miRNA region
KIAA0100	Mature miRNA region
SLFN11	Mature miRNA region
HK1	Mature miRNA region
CDCA3	Mature miRNA region
ATL2	Mature miRNA region
UBAP2L	Mature miRNA region
FERMT1	Mature miRNA region
DSP	Mature miRNA region
VPS13D	Mature miRNA region
PSMD2	Mature miRNA region
DYRK2	Mature miRNA region
TUBA1B	Mature miRNA region
ZNF770	Mature miRNA region
FOXD4L6	Mature miRNA region
CCL5	Mature miRNA region
RNF213	Mature miRNA region
CELF2	Mature miRNA region
DGCR8	Mature miRNA region
PARD6B	Mature miRNA region
RBM4	Mature miRNA region
TMEM97	Mature miRNA region
CTC1	Mature miRNA region
JAZF1	Mature miRNA region
NCKAP5L	Mature miRNA region
PMPCA	Mature miRNA region
WNK3	Mature miRNA region
NICN1	Mature miRNA region
CA5B	Mature miRNA region
MRPL50	Mature miRNA region
NOLC1	Mature miRNA region
RPS27	Mature miRNA region
TDRD7	Mature miRNA region
TDG	Mature miRNA region
SMAP2	Mature miRNA region
XIAP	Mature miRNA region
STAM	Mature miRNA region
PPP1R10	Mature miRNA region
PPIG	Mature miRNA region
IGF2BP3	Mature miRNA region
GTF3C1	Mature miRNA region
FAM171A2	Mature miRNA region
ZFP62	Mature miRNA region
OGT	Mature miRNA region
HMGB1	Mature miRNA region
AEBP2	Mature miRNA region
EN2	Mature miRNA region
PPP2R1A	Mature miRNA region
BTRC	Mature miRNA region
TNFRSF1A	Mature miRNA region
PREPL	Mature miRNA region
MT-ND4	Mature miRNA region
JMJD1C	Mature miRNA region
PIP4K2B	Mature miRNA region
TBC1D31	Mature miRNA region
GUCD1	Mature miRNA region
OSBPL9	Mature miRNA region
KLF13	Mature miRNA region
PTK2	Mature miRNA region
MTFR1	Mature miRNA region
CDH18	Mature miRNA region
CNTNAP2	Mature miRNA region
IGF2BP2	Mature miRNA region
CHEK1	Mature miRNA region
E2F8	Mature miRNA region
MYCN	Mature miRNA region
ELAVL1	Mature miRNA region
ZNF236	Mature miRNA region
HMGA2	Mature miRNA region
HS6ST2	Mature miRNA region
PAPD4	Mature miRNA region
ZNF793	Mature miRNA region
PFAS	Mature miRNA region
PFN1	Mature miRNA region
LIF	Mature miRNA region
SPCS2	Mature miRNA region
YWHAE	Mature miRNA region
ATP6V1B2	Mature miRNA region
SMC1A	Mature miRNA region
SPTBN1	Mature miRNA region
TIMP3	Mature miRNA region
PRRC2A	Mature miRNA region
MTMR14	Mature miRNA region
RRP1B	Mature miRNA region
ACTG1	Mature miRNA region
TNFAIP3	Mature miRNA region
ARHGAP19	Mature miRNA region
SHANK1	Mature miRNA region
SEMA4B	Mature miRNA region
YWHAG	Mature miRNA region
PSD3	Mature miRNA region
CCNG1	Mature miRNA region
PANX1	Mature miRNA region
RPLP2	Mature miRNA region
STARD7	Mature miRNA region
AGO1	Mature miRNA region
RHBDD2	Mature miRNA region
PCDHGB2	Mature miRNA region
MT-ND1	Mature miRNA region
ERMP1	Mature miRNA region
NCBP1	Mature miRNA region
PSMA6P1	Mature miRNA region
GGCT	Mature miRNA region
MATR3	Mature miRNA region
NTRK3	Mature miRNA region
SUPT4H1	Mature miRNA region
GTPBP8	Mature miRNA region
ALMS1	Mature miRNA region
ENO1	Mature miRNA region
UNC45A	Mature miRNA region
COL6A1	Mature miRNA region
MORC2	Mature miRNA region
PYCR1	Mature miRNA region
HLA-C	Mature miRNA region
USMG5	Mature miRNA region
MAPK8	Mature miRNA region
IP6K1	Mature miRNA region
DCBLD2	Mature miRNA region
CGNL1	Mature miRNA region
DCAF6	Mature miRNA region
ARFGEF1	Mature miRNA region
SETD1A	Mature miRNA region
SCMH1	Mature miRNA region
BRI3	Mature miRNA region
ATXN2L	Mature miRNA region
CAMTA1	miRNA target sites
YTHDC2	miRNA target sites
HIF1A	miRNA target sites
GIGYF1	miRNA target sites

Extended variants
information (count: 10037 )
Associated
traits (count: 70 )

Variant overlapped rSNPs/rCNVs (count:10037 , 50 per page) page: 1 2 3 4 5 6 7 ... 201

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs370256752	chr19:52103936-52103937	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs73934244	chr19:52103950-52103951	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs529135092	chr19:52103976-52103977	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs562034621	chr19:52103982-52103983	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs529438825	chr19:52103988-52103989	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs184240157	chr19:52104025-52104026	Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs559928576	chr19:52104044-52104045	Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs73934245	chr19:52104048-52104049	Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs75814958	chr19:52104051-52104052	Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs570016175	chr19:52104063-52104064	Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs189861594	chr19:52104079-52104080	Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs3834982	chr19:52104083-52104084	Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs398040390	chr19:52104087-52104088	Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs181131485	chr19:52104115-52104116	Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs567246222	chr19:52104132-52104133	Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs534743633	chr19:52104151-52104152	Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs552808992	chr19:52104156-52104157	Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs375066779	chr19:52104165-52104166	Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs571439234	chr19:52104180-52104181	Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs150633040	chr19:52104186-52104187	Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs557253270	chr19:52104201-52104202	Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs575653015	chr19:52104220-52104221	Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs56107190	chr19:52104221-52104222	Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs368312493	chr19:52104255-52104256	Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs555761767	chr19:52104299-52104300	Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs561366069	chr19:52104303-52104304	Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs574037478	chr19:52104343-52104344	Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs368586805	chr19:52104356-52104357	Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs73934247	chr19:52104385-52104386	Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs533302818	chr19:52104407-52104408	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs184867836	chr19:52104408-52104409	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs377094799	chr19:52104439-52104440	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs563630203	chr19:52104457-52104458	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs531156141	chr19:52104461-52104462	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs532344921	chr19:52104480-52104481	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs8113451	chr19:52104489-52104490	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs139695142	chr19:52104518-52104519	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs532386860	chr19:52104522-52104523	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs528096990	chr19:52104534-52104535	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs370887266	chr19:52104535-52104536	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs546628889	chr19:52104544-52104545	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs3752127	chr19:52104560-52104561	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs538829422	chr19:52104571-52104572	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs557242732	chr19:52104573-52104574	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs569153841	chr19:52104580-52104581	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs570830341	chr19:52104628-52104629	Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs536586241	chr19:52104660-52104661	Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs56400708	chr19:52104661-52104662	Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs554580158	chr19:52104675-52104676	Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs3752126	chr19:52104713-52104714	Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:70)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Adrenocortical carcinoma	18281524	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Cancer	20164920	CNVD
Melanoma	17363583	CNVD
early-passage human iPS cells	21368824	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Ovarian cancer	22355333	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Autism	20531469	CNVD

Chromatin state (count:3922 , 50 per page) page: 1 2 3 4 5 6 7 ... 79

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:52098600-52105000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr19:52098600-52110400	Weak transcription	Brain Cingulate Gyrus	brain
3	chr19:52098800-52110600	Weak transcription	Brain Anterior Caudate	brain
4	chr19:52099400-52110800	Weak transcription	Pancreas	Pancrea
5	chr19:52102200-52105400	Weak transcription	Gastric	stomach
6	chr19:52102400-52104200	Weak transcription	Spleen	Spleen
7	chr19:52102600-52104200	Enhancers	Primary B cells from peripheral blood	blood
8	chr19:52103400-52104600	Flanking Active TSS	GM12878-XiMat	blood
9	chr19:52104000-52104200	Bivalent Enhancer	Primary B cells from cord blood	blood
10	chr19:52104000-52104200	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
11	chr19:52104000-52104200	Enhancers	Sigmoid Colon	Sigmoid Colon
12	chr19:52104000-52104400	Active TSS	Rectal Mucosa Donor 29	rectum
13	chr19:52104000-52104600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr19:52104000-52104800	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
15	chr19:52104000-52105000	Bivalent Enhancer	Primary hematopoietic stem cells	blood
16	chr19:52104000-52105800	Active TSS	Duodenum Mucosa	Duodenum
17	chr19:52104200-52104400	Flanking Active TSS	Primary B cells from cord blood	blood
18	chr19:52104200-52104400	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
19	chr19:52104200-52104400	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
20	chr19:52104200-52104400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
21	chr19:52104200-52104400	Bivalent Enhancer	Fetal Thymus	thymus
22	chr19:52104200-52104400	Bivalent/Poised TSS	Small Intestine	intestine
23	chr19:52104200-52104600	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
24	chr19:52104200-52104600	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
25	chr19:52104200-52104600	Flanking Active TSS	Primary B cells from peripheral blood	blood
26	chr19:52104200-52104600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells short term culture	blood
27	chr19:52104200-52104600	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
28	chr19:52104200-52104600	Flanking Bivalent TSS/Enh	Primary Natural Killer cells fromperipheralblood	blood
29	chr19:52104200-52104600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
30	chr19:52104200-52104600	Bivalent/Poised TSS	Primary mononuclear cells fromperipheralblood	Blood
31	chr19:52104200-52104600	Bivalent Enhancer	Placenta Amnion	Placenta Amnion
32	chr19:52104200-52104600	Bivalent Enhancer	Right Ventricle	heart
33	chr19:52104200-52105000	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr19:52104200-52105000	Active TSS	Sigmoid Colon	Sigmoid Colon
35	chr19:52104200-52105000	Bivalent Enhancer	Spleen	Spleen
36	chr19:52104200-52105200	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
37	chr19:52104400-52104600	Bivalent/Poised TSS	Primary T helper cells fromperipheralblood	blood
38	chr19:52104400-52104600	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
39	chr19:52104400-52104600	Bivalent Enhancer	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr19:52104400-52104600	Bivalent Enhancer	Fetal Muscle Leg	muscle
41	chr19:52104400-52104600	Bivalent/Poised TSS	Fetal Thymus	thymus
42	chr19:52104400-52104600	Bivalent Enhancer	Left Ventricle	heart
43	chr19:52104400-52105000	Bivalent/Poised TSS	Primary neutrophils fromperipheralblood	blood
44	chr19:52104400-52105000	Bivalent/Poised TSS	Thymus	Thymus
45	chr19:52104400-52105200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
46	chr19:52104400-52105200	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
47	chr19:52104400-52105800	Enhancers	Primary B cells from cord blood	blood
48	chr19:52104400-52110000	Weak transcription	Rectal Mucosa Donor 29	rectum
49	chr19:52104600-52104800	Bivalent/Poised TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
50	chr19:52104600-52105000	Active TSS	Primary B cells from peripheral blood	blood

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