Variant report

Variant	nsv1059148
Chromosome Location	chr19:52211749-52359815
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2369)
CpG islands
(count:2691)
Chromatin interactive
region (count:133)
LncRNA
region (count:23)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2369 , 50 per page) page: 1 2 3 4 5 6 7 ... 48

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:52313645-52313812	HepG2	liver:	n/a	n/a
2	ARID3A	chr19:52333617-52333822	K562	blood:	n/a	n/a
3	ARID3A	chr19:52274862-52275001	K562	blood:	n/a	n/a
4	ARID3A	chr19:52310240-52311002	K562	blood:	n/a	n/a
5	ARID3A	chr19:52308170-52308456	HepG2	liver:	n/a	n/a
6	ARID3A	chr19:52298176-52298372	K562	blood:	n/a	n/a
7	ARID3A	chr19:52299117-52300997	K562	blood:	n/a	n/a
8	ARID3A	chr19:52311894-52312194	K562	blood:	n/a	n/a
9	ARID3A	chr19:52216127-52216237	K562	blood:	n/a	n/a
10	ARID3A	chr19:52303443-52304384	K562	blood:	n/a	n/a
11	ARID3A	chr19:52302554-52302890	K562	blood:	n/a	n/a
12	ARID3A	chr19:52281095-52281512	K562	blood:	n/a	n/a
13	ARID3A	chr19:52313557-52313692	K562	blood:	n/a	n/a
14	ARID3A	chr19:52288166-52289145	K562	blood:	n/a	n/a
15	ARID3A	chr19:52306606-52307609	K562	blood:	n/a	n/a
16	ARID3A	chr19:52307809-52308459	K562	blood:	n/a	n/a
17	ARID3A	chr19:52237226-52237413	K562	blood:	n/a	n/a
18	ARID3A	chr19:52286712-52286989	K562	blood:	n/a	n/a
19	ATF1	chr19:52302531-52302910	K562	blood:	n/a	n/a
20	ATF1	chr19:52303528-52304254	K562	blood:	n/a	n/a
21	ATF1	chr19:52308082-52308473	K562	blood:	n/a	n/a
22	ATF1	chr19:52282997-52283290	K562	blood:	n/a	n/a
23	ATF1	chr19:52310327-52310825	K562	blood:	n/a	n/a
24	ATF1	chr19:52288144-52288776	K562	blood:	n/a	n/a
25	ATF1	chr19:52237092-52237389	K562	blood:	n/a	n/a
26	ATF1	chr19:52286699-52286989	K562	blood:	n/a	n/a
27	ATF1	chr19:52239296-52239871	K562	blood:	n/a	n/a
28	ATF1	chr19:52299358-52299816	K562	blood:	n/a	n/a
29	ATF1	chr19:52325702-52325884	K562	blood:	n/a	n/a
30	ATF1	chr19:52290370-52290609	K562	blood:	n/a	n/a
31	ATF1	chr19:52243137-52243393	K562	blood:	n/a	n/a
32	ATF1	chr19:52313567-52313801	K562	blood:	n/a	n/a
33	ATF3	chr19:52302515-52302919	K562	blood:	n/a	n/a
34	BACH1	chr19:52237319-52237585	K562	blood:	n/a	n/a
35	BACH1	chr19:52222347-52223096	H1-hESC	embryonic stem cell:	n/a	n/a
36	BACH1	chr19:52282939-52282950	K562	blood:	n/a	n/a
37	BACH1	chr19:52216051-52216193	K562	blood:	n/a	n/a
38	BACH1	chr19:52303550-52304264	K562	blood:	n/a	n/a
39	BACH1	chr19:52306462-52306629	K562	blood:	n/a	n/a
40	BATF	chr19:52288219-52288683	GM12878	blood:	n/a	n/a
41	BATF	chr19:52314564-52314896	GM12878	blood:	n/a	chr19:52314743-52314754
42	BATF	chr19:52288291-52288627	GM12878	blood:	n/a	n/a
43	BATF	chr19:52314611-52314850	GM12878	blood:	n/a	chr19:52314743-52314754
44	BCL3	chr19:52216373-52217627	A549	lung:	n/a	n/a
45	BCL3	chr19:52214225-52215393	A549	lung:	n/a	n/a
46	BCL3	chr19:52212784-52213373	A549	lung:	n/a	n/a
47	BCL3	chr19:52226655-52227156	GM12878	blood:	n/a	n/a
48	BCL3	chr19:52217768-52219081	A549	lung:	n/a	n/a
49	BCL3	chr19:52213388-52214137	A549	lung:	n/a	n/a
50	BCL3	chr19:52215627-52217718	A549	lung:	n/a	n/a

(count:2691 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:52227967-52228017	ECC-1	luminal epithelium:	n/a
2	chr19:52297968-52298018	HMEC	breast:	n/a
3	chr19:52216726-52216776	HMEC	breast:	n/a
4	chr19:52256460-52256510	GM12891	blood:	n/a
5	chr19:52256460-52256510	PrEC	prostate:	n/a
6	chr19:52328110-52328160	HL-60	blood:	n/a
7	chr19:52223620-52223670	PFSK-1	brain:	n/a
8	chr19:52227967-52228017	ECC-1	luminal epithelium:	n/a
9	chr19:52297968-52298018	HMEC	breast:	n/a
10	chr19:52216726-52216776	HMEC	breast:	n/a
11	chr19:52256460-52256510	GM12891	blood:	n/a
12	chr19:52256460-52256510	PrEC	prostate:	n/a
13	chr19:52328110-52328160	HL-60	blood:	n/a
14	chr19:52223620-52223670	PFSK-1	brain:	n/a
15	chr19:52327441-52327491	GM12892	blood:	n/a
16	chr19:52249171-52249221	MCF10A-Er-Src	breast:	n/a
17	chr19:52254222-52254272	HCF	heart:	n/a
18	chr19:52297519-52297569	NHDF-neo	bronchial:	n/a
19	chr19:52265748-52265798	Jurkat	blood:	n/a
20	chr19:52222446-52222496	ECC-1	luminal epithelium:	n/a
21	chr19:52264411-52264461	MCF10A-Er-Src	breast:	n/a
22	chr19:52217022-52217072	GM12891	blood:	n/a
23	chr19:52227357-52227407	U87	brain:	n/a
24	chr19:52216558-52216608	GM12891	blood:	n/a
25	chr19:52255673-52255723	BE2_C	brain:	n/a
26	chr19:52268814-52268864	HCF	heart:	n/a
27	chr19:52266295-52266345	HEEpiC	esophagus:	n/a
28	chr19:52216558-52216608	HCF	heart:	n/a
29	chr19:52266642-52266692	AG04450	lung:	fetal
30	chr19:52222431-52222481	GM12892	blood:	n/a
31	chr19:52328110-52328160	AoSMC	blood vessel:	n/a
32	chr19:52217022-52217072	GM19239	blood:	n/a
33	chr19:52255413-52255463	HEK293	kidney:	embryo
34	chr19:52222431-52222481	HRPEpiC	eye:	n/a
35	chr19:52264411-52264461	RPTEC	kidney:	n/a
36	chr19:52228038-52228088	SK-N-SH_RA	brain:	n/a
37	chr19:52255413-52255463	LNCaP	prostate:	n/a
38	chr19:52218453-52218503	HAEpiC	amniotic membrane:	n/a
39	chr19:52222698-52222748	PANC-1	pancreas:	n/a
40	chr19:52266482-52266532	K562	blood:	n/a
41	chr19:52262969-52263019	BE2_C	brain:	n/a
42	chr19:52249171-52249221	AG04449	skin:	fetal
43	chr19:52263842-52263892	T-47D	breast:	n/a
44	chr19:52249171-52249221	Jurkat	blood:	n/a
45	chr19:52217388-52217438	K562	blood:	n/a
46	chr19:52225777-52225827	LNCaP	prostate:	n/a
47	chr19:52228048-52228098	SK-N-SH	brain:	n/a
48	chr19:52213977-52214027	GM12891	blood:	n/a
49	chr19:52228038-52228088	SK-N-SH	brain:	n/a
50	chr19:52228038-52228088	PrEC	prostate:	n/a

(count:133 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr19:52350825..52353378-chr19:52353698..52357895,4	K562	blood:
2	chr19:52215836..52216573-chr19:52280774..52281726,5	MCF-7	breast:
3	chr19:52293197..52295427-chr19:52302350..52304718,2	K562	blood:
4	chr19:52218179..52219711-chr19:52309357..52312195,2	MCF-7	breast:
5	chr19:52357027..52358748-chr19:52365567..52367479,2	K562	blood:
6	chr19:52344484..52346538-chr19:52349352..52351510,2	K562	blood:
7	chr19:52211595..52213921-chr19:52286963..52288731,2	MCF-7	breast:
8	chr19:52229702..52232519-chr19:52243094..52246090,2	K562	blood:
9	chr19:52226496..52228351-chr19:52284249..52286511,2	MCF-7	breast:
10	chr19:52215661..52216484-chr19:52286408..52287282,3	MCF-7	breast:
11	chr19:52279714..52282274-chr19:52309726..52312482,2	MCF-7	breast:
12	chr19:52210196..52213453-chr19:52222345..52225170,3	K562	blood:
13	chr19:52286760..52288347-chr19:52288825..52290368,2	MCF-7	breast:
14	chr19:52350825..52353378-chr19:52353698..52357895,4	K562	blood:
15	chr19:52281378..52282199-chr19:52310053..52311134,3	MCF-7	breast:
16	chr19:52216356..52218873-chr19:52218955..52221873,2	MCF-7	breast:
17	chr19:52306935..52308670-chr19:52309140..52312015,2	K562	blood:
18	chr19:52191235..52193231-chr19:52302966..52304607,2	MCF-7	breast:
19	chr19:52300406..52303800-chr19:52305611..52308534,3	K562	blood:
20	chr19:52353715..52356648-chr19:52403345..52405418,2	K562	blood:
21	chr19:52325388..52327096-chr19:52332762..52335331,2	K562	blood:
22	chr19:52293197..52295427-chr19:52302350..52304718,2	K562	blood:
23	chr19:52171972..52176073-chr19:52299212..52302483,3	K562	blood:
24	chr19:52327504..52330084-chr19:52332158..52334716,2	K562	blood:
25	chr19:52288793..52290684-chr19:52309015..52310845,2	MCF-7	breast:
26	chr19:52277252..52280164-chr19:52282818..52285281,2	K562	blood:
27	chr19:52213445..52215561-chr19:52311102..52312961,2	MCF-7	breast:
28	chr19:52197003..52199691-chr19:52213714..52215992,2	MCF-7	breast:
29	chr19:52286503..52287282-chr19:52313444..52314004,2	MCF-7	breast:
30	chr19:52277252..52280164-chr19:52282818..52285281,2	K562	blood:
31	chr19:52246232..52248265-chr19:52275684..52277593,2	K562	blood:
32	chr19:51870824..51872343-chr19:52285701..52288482,2	MCF-7	breast:
33	chr19:52053557..52056461-chr19:52303271..52305092,2	K562	blood:
34	chr19:52325388..52327096-chr19:52332762..52335331,2	K562	blood:
35	chr19:52286428..52287255-chr19:52311675..52312485,2	K562	blood:
36	chr19:52288417..52292749-chr19:52303564..52308075,7	MCF-7	breast:
37	chr19:52297423..52299062-chr19:52310490..52313161,2	MCF-7	breast:
38	chr19:52344484..52346538-chr19:52349352..52351510,2	K562	blood:
39	chr19:52311117..52313803-chr19:52333610..52335464,2	MCF-7	breast:
40	chr19:52216500..52217173-chr19:52286806..52287310,2	MCF-7	breast:
41	chr19:52339899..52342041-chr19:52352045..52353775,2	K562	blood:
42	chr19:52204536..52207246-chr19:52231773..52233515,2	K562	blood:
43	chr19:52351131..52353824-chr19:52364470..52367070,2	K562	blood:
44	chr19:52302303..52304352-chr19:52308836..52310824,2	K562	blood:
45	chr19:52189901..52192880-chr19:52273718..52275861,2	MCF-7	breast:
46	chr19:52211042..52212798-chr19:52225953..52228125,2	MCF-7	breast:
47	chr19:52216020..52218332-chr19:52241843..52243372,2	MCF-7	breast:
48	chr19:52215661..52216484-chr19:52286408..52287282,3	MCF-7	breast:
49	chr19:52204118..52207726-chr19:52271324..52274498,3	K562	blood:
50	chr19:52219107..52222029-chr19:52222398..52224089,2	K562	blood:

(count:23 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF577-3	chr19:52307980-52308424	NONHSAT067478
2	lnc-ZNF577-2	chr19:52343177-52343370	ENSG00000269483.1
3	lnc-ZNF649-3	chr19:52359056-52359220	NR_024181
4	lnc-ZNF577-3	chr19:52307980-52308507	NONHSAT067477
5	lnc-ZNF577-3	chr19:52314710-52314992	NONHSAT067478
6	lnc-FPR1-1	chr19:52284430-52284578	XLOC_013388
7	lnc-ZNF577-3	chr19:52314710-52314992	NONHSAT067477
8	lnc-ZNF649-3	chr19:52359063-52359220	NONHSAT067488
9	lnc-ZNF577-2	chr19:52342867-52343370	NONHSAT067482
10	lnc-ZNF577-2	chr19:52317206-52317230	NONHSAT067481
11	lnc-ZNF577-2	chr19:52343024-52343132	ENSG00000268316.1
12	lnc-ZNF649-3	chr19:52359056-52359220	NONHSAT067485
13	lnc-ZNF577-2	chr19:52346442-52346577	ENSG00000269483.1
14	lnc-ZNF577-2	chr19:52346074-52346166	ENSG00000269483.1
15	lnc-ZNF577-2	chr19:52343146-52343370	NONHSAT067481
16	lnc-FPR1-1	chr19:52282890-52283234	XLOC_013388
17	lnc-FPR1-1	chr19:52286673-52286772	NONHSAT067476
18	lnc-ZNF649-3	chr19:52359057-52359220	NONHSAT067486
19	lnc-ZNF577-2	chr19:52346074-52346186	NONHSAT067482
20	lnc-ZNF577-2	chr19:52343756-52344198	ENSG00000268316.1
21	lnc-FPR1-1	chr19:52283028-52283234	NONHSAT067476
22	lnc-ZNF577-2	chr19:52346074-52346168	NONHSAT067481
23	lnc-FPR1-1	chr19:52284430-52284599	NONHSAT067476

No data

Variant related genes	Relation type
HAS1	TF binding region
ENSG00000269483	TF binding region
ENSG00000268316	TF binding region
FPR1	TF binding region
FPR2	TF binding region
FPR3	TF binding region
HAS1	CpG island
ENSG00000269483	CpG island
ENSG00000268316	CpG island
FPR1	CpG island
FPR2	CpG island
FPR3	CpG island
ENSG00000171049	chromatin interactions
ENSG00000198093	chromatin interactions
ENSG00000187474	chromatin interactions
ENSG00000238486	chromatin interactions
ENSG00000182310	chromatin interactions
ENSG00000105509	chromatin interactions
ENSG00000171051	chromatin interactions
ENSG00000161551	chromatin interactions
ENSG00000269403	chromatin interactions
ENSG00000171848	chromatin interactions
ENSG00000160318	chromatin interactions
ENSG00000196214	chromatin interactions
ENSG00000269483	chromatin interactions
YTHDC2	miRNA target sites
HIF1A	miRNA target sites
GIGYF1	miRNA target sites
CAMTA1	miRNA target sites

Extended variants
information (count: 5895 )
Associated
traits (count: 69 )

Variant overlapped rSNPs/rCNVs (count:5895 , 50 per page) page: 1 2 3 4 5 6 7 ... 118

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs185465209	chr19:52211772-52211773	Weak transcription Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs563030173	chr19:52211806-52211807	Weak transcription Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs575074669	chr19:52211839-52211840	Weak transcription Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs2864921	chr19:52211845-52211846	Weak transcription Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
5	rs148793478	chr19:52211851-52211852	Weak transcription Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs190369966	chr19:52211987-52211988	Weak transcription Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs552851328	chr19:52211988-52211989	Weak transcription Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs563899792	chr19:52212029-52212030	Weak transcription Genic enhancers Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs142440487	chr19:52212083-52212084	Weak transcription Genic enhancers Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs549596223	chr19:52212107-52212108	Weak transcription Genic enhancers Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs567860670	chr19:52212112-52212113	Weak transcription Genic enhancers Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs535179802	chr19:52212124-52212125	Weak transcription Genic enhancers Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs548398891	chr19:52212135-52212136	Weak transcription Genic enhancers Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs565553638	chr19:52212145-52212146	Weak transcription Genic enhancers Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs539317741	chr19:52212147-52212148	Weak transcription Genic enhancers Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs111558263	chr19:52212168-52212169	Weak transcription Genic enhancers Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs192835136	chr19:52212204-52212205	Weak transcription Genic enhancers Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs112371365	chr19:52212205-52212206	Weak transcription Genic enhancers Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs140641478	chr19:52212236-52212237	Weak transcription Genic enhancers Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs577150070	chr19:52212301-52212302	Weak transcription Genic enhancers Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs113220227	chr19:52212397-52212398	Weak transcription Genic enhancers Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs7254974	chr19:52212399-52212400	Weak transcription Genic enhancers Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
23	rs367970330	chr19:52212472-52212473	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs35079110	chr19:52212473-52212474	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs57640592	chr19:52212487-52212488	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs143309568	chr19:52212523-52212524	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs184066071	chr19:52212526-52212527	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs188365135	chr19:52212537-52212538	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs560637770	chr19:52212588-52212589	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs113684677	chr19:52212638-52212639	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs546158923	chr19:52212654-52212655	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs368299211	chr19:52212662-52212663	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs146693548	chr19:52212726-52212727	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs549703422	chr19:52212741-52212742	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs140119426	chr19:52212761-52212762	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs144991687	chr19:52212768-52212769	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs372399335	chr19:52212782-52212783	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs574006940	chr19:52212784-52212785	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs56170768	chr19:52212803-52212804	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs76554331	chr19:52212804-52212805	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs528919795	chr19:52212810-52212811	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs544681006	chr19:52212867-52212868	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs539172680	chr19:52212880-52212881	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs565514428	chr19:52212881-52212882	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs546382302	chr19:52212884-52212885	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs568645060	chr19:52212885-52212886	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs150292752	chr19:52212911-52212912	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs180877194	chr19:52212982-52212983	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs11880556	chr19:52213139-52213140	ZNF genes & repeats Weak transcription Enhancers Active TSS Bivalent Enhancer	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs185238086	chr19:52213144-52213145	ZNF genes & repeats Weak transcription Enhancers Active TSS Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:69)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Adrenocortical carcinoma	18281524	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Cancer	20164920	CNVD
Melanoma	17363583	CNVD
Ovarian cancer	22355333	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Autism	20531469	CNVD

Chromatin state (count:1505 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:52208000-52212000	Weak transcription	Aorta	Aorta
2	chr19:52208000-52216600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr19:52208200-52211800	Strong transcription	NHLF	lung
4	chr19:52208400-52212400	Strong transcription	A549	lung
5	chr19:52208400-52213000	Weak transcription	Esophagus	oesophagus
6	chr19:52208400-52213000	Weak transcription	Lung	lung
7	chr19:52208400-52216200	Weak transcription	Fetal Brain Male	brain
8	chr19:52208400-52218200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
9	chr19:52208400-52220200	Weak transcription	Ovary	ovary
10	chr19:52208600-52211800	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr19:52208600-52211800	Strong transcription	HSMM	muscle
12	chr19:52208600-52212000	Weak transcription	Right Ventricle	heart
13	chr19:52208600-52212200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
14	chr19:52208600-52212200	Weak transcription	Brain Germinal Matrix	brain
15	chr19:52208600-52212400	Weak transcription	Colonic Mucosa	Colon
16	chr19:52208600-52212800	Weak transcription	Primary T cells from cord blood	blood
17	chr19:52208600-52212800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr19:52208600-52213000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
19	chr19:52208600-52214400	Weak transcription	Primary B cells from cord blood	blood
20	chr19:52208600-52214400	Weak transcription	Sigmoid Colon	Sigmoid Colon
21	chr19:52208600-52218800	Weak transcription	Fetal Heart	heart
22	chr19:52208800-52212000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
23	chr19:52208800-52212000	Weak transcription	Rectal Mucosa Donor 29	rectum
24	chr19:52208800-52212400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
25	chr19:52208800-52213000	Weak transcription	Thymus	Thymus
26	chr19:52208800-52213000	Weak transcription	NHEK	skin
27	chr19:52208800-52213200	Weak transcription	Primary B cells from peripheral blood	blood
28	chr19:52208800-52213600	Weak transcription	Colon Smooth Muscle	Colon
29	chr19:52208800-52214600	Weak transcription	GM12878-XiMat	blood
30	chr19:52208800-52222000	Weak transcription	Brain Inferior Temporal Lobe	brain
31	chr19:52209000-52211800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr19:52209000-52212400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
33	chr19:52209000-52214800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
34	chr19:52209600-52211800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
35	chr19:52209600-52213800	Weak transcription	Brain Cingulate Gyrus	brain
36	chr19:52209600-52222400	Weak transcription	Spleen	Spleen
37	chr19:52209800-52211800	Weak transcription	Primary T cells fromperipheralblood	blood
38	chr19:52209800-52212000	Strong transcription	Primary neutrophils fromperipheralblood	blood
39	chr19:52209800-52212600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
40	chr19:52209800-52212800	Weak transcription	HUES64 Cell Line	embryonic stem cell
41	chr19:52209800-52213000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
42	chr19:52210000-52212000	Weak transcription	Rectal Mucosa Donor 31	rectum
43	chr19:52210000-52213000	Weak transcription	Fetal Brain Female	brain
44	chr19:52210000-52214800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr19:52210200-52212200	Weak transcription	HUES6 Cell Line	embryonic stem cell
46	chr19:52210200-52212400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
47	chr19:52210200-52213200	Weak transcription	Fetal Intestine Large	intestine
48	chr19:52210200-52213400	Weak transcription	Primary monocytes fromperipheralblood	blood
49	chr19:52210200-52213400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
50	chr19:52210400-52212000	Weak transcription	HUVEC	blood vessel

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