Variant report

Variant	nsv1060178
Chromosome Location	chr20:26167980-26225145
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2017)
CpG islands
(count:1039)
Chromatin interactive
region (count:60)
LncRNA
region (count:177)
Mature miRNA
region (count: 1)
miRNA target
sites (count:0)

(count:2017 , 50 per page) page: 1 2 3 4 5 6 7 ... 41

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr20:26188665-26190661	K562	blood:	n/a	n/a
2	ARID3A	chr20:26188670-26190654	HepG2	liver:	n/a	n/a
3	ATF1	chr20:26200807-26200973	K562	blood:	n/a	n/a
4	ATF1	chr20:26212000-26212002	K562	blood:	n/a	n/a
5	ATF1	chr20:26207076-26207177	K562	blood:	n/a	n/a
6	ATF1	chr20:26202019-26202231	K562	blood:	n/a	n/a
7	ATF1	chr20:26202933-26202936	K562	blood:	n/a	n/a
8	ATF1	chr20:26201702-26201703	K562	blood:	n/a	n/a
9	ATF1	chr20:26210887-26211336	K562	blood:	n/a	n/a
10	ATF1	chr20:26209393-26209538	K562	blood:	n/a	n/a
11	ATF1	chr20:26206579-26206689	K562	blood:	n/a	n/a
12	ATF1	chr20:26204024-26204365	K562	blood:	n/a	n/a
13	ATF1	chr20:26207700-26208236	K562	blood:	n/a	n/a
14	ATF1	chr20:26210425-26210440	K562	blood:	n/a	n/a
15	ATF1	chr20:26213000-26213056	K562	blood:	n/a	n/a
16	ATF2	chr20:26190350-26190549	GM12878	blood:	n/a	n/a
17	ATF2	chr20:26188598-26189527	H1-hESC	embryonic stem cell:	n/a	n/a
18	ATF2	chr20:26189688-26190460	GM12878	blood:	n/a	n/a
19	ATF2	chr20:26188742-26189499	GM12878	blood:	n/a	n/a
20	ATF2	chr20:26189705-26190319	GM12878	blood:	n/a	n/a
21	ATF2	chr20:26189566-26190667	H1-hESC	embryonic stem cell:	n/a	n/a
22	ATF2	chr20:26188609-26189520	H1-hESC	embryonic stem cell:	n/a	n/a
23	ATF2	chr20:26189559-26190696	H1-hESC	embryonic stem cell:	n/a	n/a
24	ATF2	chr20:26188658-26189437	GM12878	blood:	n/a	n/a
25	ATF3	chr20:26189239-26189386	K562	blood:	n/a	n/a
26	ATF3	chr20:26188697-26190655	K562	blood:	n/a	chr20:26190344-26190352
27	ATF3	chr20:26189712-26190314	K562	blood:	n/a	n/a
28	ATF3	chr20:26189549-26190567	H1-hESC	embryonic stem cell:	n/a	chr20:26190344-26190352
29	ATF3	chr20:26189743-26190295	GM12878	blood:	n/a	n/a
30	ATF3	chr20:26188643-26190671	A549	lung:	n/a	chr20:26190344-26190352
31	ATF3	chr20:26190389-26190519	K562	blood:	n/a	n/a
32	ATF3	chr20:26188662-26189535	H1-hESC	embryonic stem cell:	n/a	n/a
33	ATF3	chr20:26188778-26189204	GM12878	blood:	n/a	n/a
34	ATF3	chr20:26189747-26190340	K562	blood:	n/a	n/a
35	ATF3	chr20:26189724-26190322	HepG2	liver:	n/a	n/a
36	ATF3	chr20:26188637-26190747	A549	lung:	n/a	chr20:26190344-26190352
37	ATF3	chr20:26190355-26190540	HepG2	liver:	n/a	n/a
38	ATF3	chr20:26188677-26189497	HepG2	liver:	n/a	n/a
39	ATF3	chr20:26188754-26189204	K562	blood:	n/a	n/a
40	ATF3	chr20:26189707-26190649	H1-hESC	embryonic stem cell:	n/a	chr20:26190344-26190352
41	BACH1	chr20:26188659-26190667	H1-hESC	embryonic stem cell:	n/a	n/a
42	BACH1	chr20:26203731-26203928	K562	blood:	n/a	n/a
43	BACH1	chr20:26188668-26190665	K562	blood:	n/a	n/a
44	BATF	chr20:26189721-26190303	GM12878	blood:	n/a	n/a
45	BATF	chr20:26188677-26189220	GM12878	blood:	n/a	n/a
46	BCL11A	chr20:26188682-26189216	GM12878	blood:	n/a	chr20:26188715-26188728 chr20:26188719-26188732 chr20:26189177-26189186
47	BCL11A	chr20:26189727-26190296	GM12878	blood:	n/a	n/a
48	BCL11A	chr20:26189735-26190289	H1-hESC	embryonic stem cell:	n/a	n/a
49	BCL3	chr20:26188670-26189518	GM12878	blood:	n/a	chr20:26188715-26188728 chr20:26188719-26188732 chr20:26189177-26189186
50	BCL3	chr20:26189659-26190591	K562	blood:	n/a	n/a

(count:1039 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr20:26188639-26188689	GM12891	blood:	n/a
2	chr20:26188976-26189026	T-47D	breast:	n/a
3	chr20:26188639-26188689	GM12891	blood:	n/a
4	chr20:26188976-26189026	T-47D	breast:	n/a
5	chr20:26190354-26190404	IMR90	lung:	fetal
6	chr20:26190354-26190404	SK-N-SH_RA	brain:	n/a
7	chr20:26189510-26189560	NHBE	bronchial:	n/a
8	chr20:26186908-26186958	IMR90	lung:	fetal
9	chr20:26186908-26186958	PrEC	prostate:	n/a
10	chr20:26188971-26189021	K562	blood:	n/a
11	chr20:26192541-26192591	NHDF-neo	bronchial:	n/a
12	chr20:26188963-26189013	GM12878	blood:	n/a
13	chr20:26190354-26190404	HCPEpiC	choroid plexus:	n/a
14	chr20:26188919-26188969	SK-N-MC	brain:	n/a
15	chr20:26189240-26189290	T-47D	breast:	n/a
16	chr20:26186908-26186958	HRPEpiC	eye:	n/a
17	chr20:26188639-26188689	PFSK-1	brain:	n/a
18	chr20:26190328-26190378	AG09319	gingival:	n/a
19	chr20:26192541-26192591	AG09309	skin:	n/a
20	chr20:26188639-26188689	NB4	blood:	n/a
21	chr20:26192541-26192591	HRCEpiC	kidney:	n/a
22	chr20:26188963-26189013	HAEpiC	amniotic membrane:	n/a
23	chr20:26186545-26186595	HL-60	blood:	n/a
24	chr20:26188943-26188993	Hela-S3	cervix:	n/a
25	chr20:26188997-26189047	GM19239	blood:	n/a
26	chr20:26188976-26189026	AG10803	skin:	n/a
27	chr20:26189665-26189715	HCT-116	colon:	n/a
28	chr20:26190354-26190404	BE2_C	brain:	n/a
29	chr20:26189240-26189290	BJ	skin:	n/a
30	chr20:26188963-26189013	HCT-116	colon:	n/a
31	chr20:26190347-26190397	ProgFib	skin:	n/a
32	chr20:26188963-26189013	U87	brain:	n/a
33	chr20:26190354-26190404	BJ	skin:	n/a
34	chr20:26188971-26189021	HL-60	blood:	n/a
35	chr20:26188971-26189021	BJ	skin:	n/a
36	chr20:26188908-26188958	NB4	blood:	n/a
37	chr20:26188997-26189047	PrEC	prostate:	n/a
38	chr20:26188997-26189047	HCPEpiC	choroid plexus:	n/a
39	chr20:26189240-26189290	RPTEC	kidney:	n/a
40	chr20:26189665-26189715	AG04450	lung:	fetal
41	chr20:26190354-26190404	GM12892	blood:	n/a
42	chr20:26189240-26189290	Jurkat	blood:	n/a
43	chr20:26189510-26189560	LNCaP	prostate:	n/a
44	chr20:26189240-26189290	NT2-D1	testis:	n/a
45	chr20:26188919-26188969	NB4	blood:	n/a
46	chr20:26188908-26188958	HRE	kidney:	n/a
47	chr20:26188976-26189026	HMEC	breast:	n/a
48	chr20:26189665-26189715	Hela-S3	cervix:	n/a
49	chr20:26189240-26189290	ovcar-3	ovarian:	n/a
50	chr20:26188943-26188993	MCF10A-Er-Src	breast:	n/a

(count:60 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr20:26201915..26204776-chr3:75992954..75996738,5	MCF-7	breast:
2	chr20:26189322..26189965-chr3:72495919..72496919,2	MCF-7	breast:
3	chr20:26190004..26190733-chr8:67687205..67687727,4	MCF-7	breast:
4	chr2:133013667..133017081-chr20:26187658..26190834,11	MCF-7	breast:
5	chr20:26192921..26195094-chr20:26197740..26199404,2	K562	blood:
6	chr20:26188275..26190944-chr21:9825018..9827152,38	MCF-7	breast:
7	chr12:20704427..20705972-chr20:26188595..26190576,2	MCF-7	breast:
8	chr20:26188271..26189555-chr21:9824988..9827433,58	MCF-7	breast:
9	chr20:26188341..26189368-chr21:9825099..9826092,4	MCF-7	breast:
10	chr16:33960778..33961976-chr20:26188545..26190262,6	K562	blood:
11	chr2:133014633..133016102-chr20:26188637..26190095,17	MCF-7	breast:
12	chr12:20703970..20704942-chr20:26190011..26190793,2	K562	blood:
13	chr20:26187251..26191978-chr21:9823998..9829001,56	K562	blood:
14	chr20:26187273..26191752-chr21:9823988..9828758,49	MCF-7	breast:
15	chr16:33961325..33966193-chr20:26187372..26191793,13	K562	blood:
16	chr20:26208071..26209607-chr3:75987301..75988916,2	K562	blood:
17	chr16:33960878..33961871-chr20:26188853..26189656,7	MCF-7	breast:
18	chr20:26188254..26190671-chr21:9824984..9827890,92	MCF-7	breast:
19	chr2:133015211..133015762-chr20:26189170..26190019,2	MCF-7	breast:
20	chr20:26188947..26190833-chr6:26156720..26159562,2	MCF-7	breast:
21	chr1:17866319..17866839-chr20:26189992..26190745,2	MCF-7	breast:
22	chr20:26188433..26190277-chr3:193787174..193790154,2	K562	blood:
23	chr2:133015237..133015768-chr20:26189161..26190454,3	K562	blood:
24	chr16:33959793..33967555-chr20:26187372..26191632,15	K562	blood:
25	chr17:73256462..73259302-chr20:26189013..26191624,2	MCF-7	breast:
26	chr12:20703907..20704890-chr20:26188413..26189402,2	MCF-7	breast:
27	chr20:26189964..26190759-chr22:50700113..50700613,2	MCF-7	breast:
28	chr20:26206073..26206971-chr3:75991464..75992265,2	MCF-7	breast:
29	chr16:33960800..33961892-chr20:26188687..26190008,21	MCF-7	breast:
30	chr20:26187252..26191975-chr21:9823984..9828995,56	MCF-7	breast:
31	chr12:127649002..127652005-chr20:26189997..26191614,3	K562	blood:
32	chr18:8406500..8407500-chr20:26188735..26189378,2	MCF-7	breast:
33	chr20:26199924..26201625-chr3:75995563..75997738,2	MCF-7	breast:
34	chr2:133011277..133016757-chr20:26187363..26191986,20	K562	blood:
35	chr2:75937839..75938339-chr20:26189314..26190135,2	MCF-7	breast:
36	chr20:26188413..26189362-chr8:101964386..101965001,2	MCF-7	breast:
37	chr2:133014709..133015762-chr20:26188882..26190143,12	MCF-7	breast:
38	chr2:133014738..133015584-chr20:26189167..26190034,2	NB4	blood:
39	chr16:33961286..33962956-chr20:26188880..26190564,2	MCF-7	breast:
40	chr20:26208095..26209894-chr3:75988198..75990401,2	MCF-7	breast:
41	chr16:33964537..33965670-chr20:26188912..26190067,3	K562	blood:
42	chr20:26188344..26189679-chr21:9825010..9826530,20	HCT-116	colon:
43	chr2:133014718..133015708-chr20:26189240..26189953,2	MCF-7	breast:
44	chr20:26188275..26190975-chr21:9824996..9827903,45	K562	blood:
45	chr19:56154889..56155389-chr20:26189706..26190477,2	K562	blood:
46	chr2:133014681..133015764-chr20:26189070..26190458,26	MCF-7	breast:
47	chr16:33960780..33961953-chr20:26188513..26190294,8	MCF-7	breast:
48	chr20:26192921..26195094-chr20:26197740..26199404,2	K562	blood:
49	chr2:133014727..133015757-chr20:26189158..26190413,12	MCF-7	breast:
50	chr20:26201563..26203476-chr3:75993448..75995749,2	K562	blood:

(count:177 , 50 per page) page: 1 2 3 4

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM182B-6	chr20:26172307-26172399	ENSG00000227195.4
2	lnc-FAM182B-6	chr20:26180085-26180159	ENSG00000227195.4
3	lnc-FAM182B-6	chr20:26180085-26180159	ENSG00000227195
4	lnc-FAM182B-6	chr20:26167632-26168473	XLOC_013715
5	lnc-FAM182B-6	chr20:26168346-26168473	ENSG00000227195.4
6	lnc-FAM182B-6	chr20:26172769-26173473	ENSG00000227195.4
7	lnc-FAM182B-6	chr20:26172429-26172536	ENSG00000227195.4
8	lnc-FAM182B-6	chr20:26189783-26189897	ENSG00000227195.4
9	lnc-FAM182B-6	chr20:26172429-26172536	ENSG00000227195.4
10	lnc-FAM182B-6	chr20:26189806-26189884	ENSG00000227195.4
11	lnc-FAM182B-6	chr20:26172429-26172536	ENSG00000227195.4
12	lnc-FAM182B-6	chr20:26180085-26180159	ENSG00000227195.4
13	lnc-FAM182B-6	chr20:26168475-26168735	ENSG00000227195.4
14	lnc-FAM182B-6	chr20:26174934-26175080	ENSG00000227195.4
15	lnc-FAM182B-6	chr20:26180085-26180161	ENSG00000227195.4
16	lnc-FAM182B-6	chr20:26189900-26189993	ENSG00000227195.4
17	lnc-FAM182B-6	chr20:26172429-26172532	ENSG00000227195.4
18	lnc-FAM182B-6	chr20:26180085-26180159	ENSG00000227195.4
19	lnc-FAM182B-6	chr20:26168274-26168473	ENSG00000227195.4
20	lnc-FAM182B-6	chr20:26172769-26172868	ENSG00000227195.4
21	lnc-FAM182B-6	chr20:26168268-26168473	ENSG00000227195.4
22	lnc-FAM182B-6	chr20:26172769-26172868	ENSG00000227195.4
23	lnc-FAM182B-6	chr20:26189885-26189959	ENSG00000227195.4
24	lnc-FAM182B-6	chr20:26172429-26172536	ENSG00000227195.4
25	lnc-FAM182B-6	chr20:26172429-26172497	ENSG00000227195.4
26	lnc-FAM182B-6	chr20:26168268-26168473	ENSG00000227195.4
27	lnc-FAM182B-6	chr20:26168271-26168473	ENSG00000227195.4
28	lnc-FAM182B-6	chr20:26172429-26172536	ENSG00000227195.4
29	lnc-FAM182B-6	chr20:26172429-26172536	ENSG00000227195.4
30	lnc-FAM182B-6	chr20:26172769-26172868	ENSG00000227195.4
31	lnc-FAM182B-6	chr20:26172769-26172868	ENSG00000227195.4
32	lnc-FAM182B-6	chr20:26188781-26188874	ENSG00000227195.4
33	lnc-FAM182A-2	chr20:26174024-26174582	XLOC_013504
34	lnc-FAM182B-6	chr20:26172769-26172868	ENSG00000227195.4
35	lnc-FAM182B-6	chr20:26180085-26180159	ENSG00000227195.4
36	lnc-FAM182B-6	chr20:26188310-26188714	ENSG00000227195.4
37	lnc-FAM182B-6	chr20:26172429-26172536	ENSG00000227195.4
38	lnc-FAM182B-6	chr20:26181094-26181178	ENSG00000227195.4
39	lnc-FAM182B-6	chr20:26168389-26168714	ENSG00000227195.4
40	lnc-FAM182B-6	chr20:26168268-26168716	ENSG00000227195.4
41	lnc-FAM182B-6	chr20:26188310-26188422	ENSG00000227195.4
42	lnc-FAM182B-6	chr20:26180085-26180159	ENSG00000227195.4
43	lnc-FAM182B-6	chr20:26172769-26172868	ENSG00000227195
44	lnc-FAM182B-6	chr20:26168268-26168473	ENSG00000227195.4
45	lnc-FAM182B-6	chr20:26180832-26180952	ENSG00000227195.4
46	lnc-FAM182B-6	chr20:26168445-26168473	ENSG00000227195.4
47	lnc-FAM182B-6	chr20:26174934-26175080	ENSG00000227195.4
48	lnc-FAM182B-6	chr20:26172769-26172868	ENSG00000227195.4
49	lnc-FAM182B-6	chr20:26174934-26175080	ENSG00000227195.4
50	lnc-FAM182B-6	chr20:26172429-26172536	ENSG00000227195.4

miRNA name	Chromosome Location	mirBase accession
hsa-miR-663a	chr20:26188879-26188900	MIMAT0003326

No data

Variant related genes	Relation type
ENSG00000238129	TF binding region
MIR663A	TF binding region
ENSG00000238129	CpG island
MIR663A	CpG island
ENSG00000263970	chromatin interactions
ENSG00000125447	chromatin interactions
ENSG00000188130	chromatin interactions
ENSG00000207986	chromatin interactions
ENSG00000200434	chromatin interactions
ENSG00000163046	chromatin interactions
ENSG00000264462	chromatin interactions
ENSG00000158373	chromatin interactions
ENSG00000031698	chromatin interactions
ENSG00000239776	chromatin interactions
ENSG00000156508	chromatin interactions
ENSG00000005436	chromatin interactions
ENSG00000221288	chromatin interactions
ENSG00000264063	chromatin interactions
ENSG00000104205	chromatin interactions
ENSG00000163602	chromatin interactions
ENSG00000256663	chromatin interactions
ENSG00000171425	chromatin interactions
ENSG00000074964	chromatin interactions
ENSG00000125445	chromatin interactions
ENSG00000230102	chromatin interactions
ENSG00000256642	chromatin interactions
ENSG00000164924	chromatin interactions
JUND	Mature miRNA region
TCEAL1	Mature miRNA region
JUNB	Mature miRNA region
CDK1	Mature miRNA region
HSPG2	Mature miRNA region
SLC16A1	miRNA target sites
NXT2	miRNA target sites

Extended variants
information (count: 2018 )
Associated
traits (count: 42 )

Variant overlapped rSNPs/rCNVs (count:2018 , 50 per page) page: 1 2 3 4 5 6 7 ... 41

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs845779	chr20:26167980-26167981	Inactive region	TF binding region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs114269653	chr20:26167991-26167992	Inactive region	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
3	rs143147261	chr20:26167999-26168000	Inactive region	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
4	rs147030843	chr20:26168005-26168006	Active TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
5	rs563726893	chr20:26168028-26168029	Active TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
6	rs187031330	chr20:26168040-26168041	Active TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
7	rs191959002	chr20:26168091-26168092	Active TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
8	rs566092871	chr20:26168108-26168109	Active TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
9	rs7343618	chr20:26168110-26168111	Active TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
10	rs532106979	chr20:26168117-26168118	Active TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
11	rs183329276	chr20:26168125-26168126	Active TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
12	rs138127588	chr20:26168162-26168163	Active TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
13	rs571414676	chr20:26168183-26168184	Active TSS	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
14	rs537100053	chr20:26168184-26168185	Active TSS	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
15	rs557168544	chr20:26168219-26168220	Active TSS	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
16	rs567341821	chr20:26168226-26168227	Active TSS	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
17	rs149566780	chr20:26168254-26168255	Active TSS	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
18	rs552974266	chr20:26168362-26168363	Active TSS	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
19	rs573064957	chr20:26168369-26168370	Active TSS	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
20	rs185843983	chr20:26168391-26168392	Active TSS	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
21	rs558548098	chr20:26168394-26168395	Active TSS	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
22	rs547059758	chr20:26168452-26168453	Inactive region	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
23	rs575415239	chr20:26168464-26168465	Inactive region	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
24	rs544313234	chr20:26168472-26168473	Inactive region	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
25	rs563940885	chr20:26168501-26168502	Inactive region	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
26	rs190215397	chr20:26168534-26168535	Inactive region	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
27	rs200290560	chr20:26168546-26168547	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
28	rs144370250	chr20:26168557-26168558	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
29	rs559808142	chr20:26168558-26168559	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
30	rs376547088	chr20:26168589-26168590	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
31	rs370689679	chr20:26168690-26168691	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
32	rs551362733	chr20:26168695-26168696	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
33	rs564932302	chr20:26168709-26168710	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
34	rs530953493	chr20:26168729-26168730	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
35	rs575501596	chr20:26170604-26170605	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
36	rs575874593	chr20:26170628-26170629	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
37	rs544289722	chr20:26170643-26170644	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
38	rs561290324	chr20:26170650-26170651	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
39	rs193183733	chr20:26170696-26170697	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
40	rs543566744	chr20:26170726-26170727	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
41	rs144393985	chr20:26170755-26170756	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
42	rs554708240	chr20:26171649-26171650	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
43	rs1856556	chr20:26171664-26171665	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
44	rs573285814	chr20:26171676-26171677	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
45	rs540883996	chr20:26171687-26171688	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
46	rs555264777	chr20:26172346-26172347	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
47	rs574998473	chr20:26172351-26172352	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
48	rs569536925	chr20:26172375-26172376	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
49	rs554162446	chr20:26172436-26172437	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
50	rs577460590	chr20:26172441-26172442	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a

Variant related diseases (count:42)

Disease	PMID	Source
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	19627613	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Colorectal cancer	19359472	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Central neurocytomas	17123091	CNVD
Colorectal cancer	16272173	CNVD
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Urothelial carcinoma	21177765	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Colorectal cancer	21645411	CNVD
Lung cancer	18438408	CNVD
Autism	22495311	CNVD
Anaplastic large cell lymphoma	18179710	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Chordoma	18071362	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
small cell lung cancer	20016488	CNVD
Colorectal cancer	16774939	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:357 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:26168000-26168400	Active TSS	Pancreatic Islets	Pancreatic Islet
2	chr20:26188200-26188600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr20:26188200-26188600	Weak transcription	Right Atrium	heart
4	chr20:26188400-26188600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr20:26188400-26189600	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
6	chr20:26188600-26188800	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr20:26188600-26188800	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr20:26188600-26188800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr20:26188600-26188800	Bivalent/Poised TSS	Primary hematopoietic stem cells short term culture	blood
10	chr20:26188600-26188800	Active TSS	Primary T helper naive cells fromperipheralblood	blood
11	chr20:26188600-26188800	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
12	chr20:26188600-26188800	Bivalent/Poised TSS	Primary T helper cells PMA-I stimulated	--
13	chr20:26188600-26188800	Bivalent/Poised TSS	Primary T helper cells fromperipheralblood	blood
14	chr20:26188600-26188800	Bivalent Enhancer	Primary T cells effector/memory enriched fromperipheralblood	blood
15	chr20:26188600-26188800	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr20:26188600-26188800	Bivalent/Poised TSS	Adipose Nuclei	Adipose
17	chr20:26188600-26188800	Bivalent Enhancer	Aorta	Aorta
18	chr20:26188600-26188800	Bivalent Enhancer	Brain Hippocampus Middle	brain
19	chr20:26188600-26188800	Bivalent/Poised TSS	Colon Smooth Muscle	Colon
20	chr20:26188600-26188800	Bivalent/Poised TSS	Fetal Brain Female	brain
21	chr20:26188600-26188800	Bivalent Enhancer	Ovary	ovary
22	chr20:26188600-26188800	Bivalent/Poised TSS	Skeletal Muscle Male	skeletal muscle
23	chr20:26188600-26189000	Flanking Bivalent TSS/Enh	Primary T cells fromperipheralblood	blood
24	chr20:26188600-26189200	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood
25	chr20:26188600-26189200	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr20:26188600-26189200	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin01	Skin
27	chr20:26188600-26189400	Bivalent Enhancer	Placenta	Placenta
28	chr20:26188600-26189400	Flanking Bivalent TSS/Enh	Left Ventricle	heart
29	chr20:26188600-26189400	Flanking Bivalent TSS/Enh	Lung	lung
30	chr20:26188600-26189400	Flanking Bivalent TSS/Enh	Pancreas	Pancrea
31	chr20:26188600-26189400	Flanking Bivalent TSS/Enh	Psoas Muscle	Psoas
32	chr20:26188600-26189400	Flanking Bivalent TSS/Enh	Right Ventricle	heart
33	chr20:26188600-26189400	Flanking Bivalent TSS/Enh	Spleen	Spleen
34	chr20:26188600-26189600	Flanking Bivalent TSS/Enh	ES-UCSF4 Cell Line	embryonic stem cell
35	chr20:26188600-26189600	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin02	Skin
36	chr20:26188600-26189600	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin03	Skin
37	chr20:26188600-26189600	Flanking Bivalent TSS/Enh	Colonic Mucosa	Colon
38	chr20:26188600-26189600	Flanking Bivalent TSS/Enh	Duodenum Smooth Muscle	Duodenum
39	chr20:26188600-26189600	Flanking Bivalent TSS/Enh	Gastric	stomach
40	chr20:26188600-26190400	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
41	chr20:26188600-26190400	Bivalent/Poised TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr20:26188600-26190400	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell
43	chr20:26188600-26190400	ZNF genes & repeats	Muscle Satellite Cultured Cells	--
44	chr20:26188600-26190400	ZNF genes & repeats	Esophagus	oesophagus
45	chr20:26188600-26190400	ZNF genes & repeats	Sigmoid Colon	Sigmoid Colon
46	chr20:26188600-26190400	ZNF genes & repeats	Dnd41	blood
47	chr20:26188600-26190400	ZNF genes & repeats	NHLF	lung
48	chr20:26188600-26190600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
49	chr20:26188600-26190600	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
50	chr20:26188600-26190600	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell

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